RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
APTX-201ENST00000309615 EXOC5O00471 708 aa17.2■□□□□ 0.34
APTX-201ENST00000309615 RSPH6AQ9H0K4 717 aa17.2■□□□□ 0.34
APTX-201ENST00000309615 ZCRB1Q8TBF4 217 aaKnown RBP17.19■□□□□ 0.34
APTX-201ENST00000309615 TNS2Q63HR2 1409 aa17.19■□□□□ 0.34
APTX-201ENST00000309615 PDE3BQ13370 1112 aa17.18■□□□□ 0.34
APTX-201ENST00000309615 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
APTX-201ENST00000309615 ILDR2Q71H61 639 aa17.18■□□□□ 0.34
APTX-201ENST00000309615 BRWD3Q6RI45 1802 aa17.18■□□□□ 0.34
APTX-201ENST00000309615 FCHSD2O94868 740 aa17.18■□□□□ 0.34
APTX-201ENST00000309615 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
APTX-201ENST00000309615 KRT27Q7Z3Y8 459 aa17.18■□□□□ 0.34
APTX-201ENST00000309615 FAM182BQ5T319 152 aa17.17■□□□□ 0.34
APTX-201ENST00000309615 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
APTX-201ENST00000309615 ADAMTS8Q9UP79 889 aa17.17■□□□□ 0.34
APTX-201ENST00000309615 MARCH10Q8NA82 808 aaPredicted RBP17.16■□□□□ 0.34
APTX-201ENST00000309615 PNISRQ8TF01 805 aaKnown RBP17.16■□□□□ 0.34
APTX-201ENST00000309615 CCER2I3L3R5 266 aa17.16■□□□□ 0.34
APTX-201ENST00000309615 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
APTX-201ENST00000309615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■□□□□ 10.8
APTX-201ENST00000309615 SPG7Q9UQ90 795 aa17.16■□□□□ 0.34
APTX-201ENST00000309615 PKD1L3Q7Z443 1732 aa17.15■□□□□ 0.34
APTX-201ENST00000309615 PLEKHG2Q9H7P9 1386 aa17.14■□□□□ 0.34
APTX-201ENST00000309615 SHANK3Q9BYB0 1731 aa17.14■□□□□ 0.34
APTX-201ENST00000309615 PLEKHO1Q53GL0 409 aaPredicted RBP17.14■□□□□ 0.33
APTX-201ENST00000309615 PLEKHF1Q96S99 279 aa17.14■□□□□ 0.33
APTX-201ENST00000309615 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.33
APTX-201ENST00000309615 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.33
APTX-201ENST00000309615 CYP27B1O15528 508 aa17.14■□□□□ 0.33
APTX-201ENST00000309615 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
APTX-201ENST00000309615 MTHFSDQ2M296 383 aaKnown RBP17.13■□□□□ 0.33
APTX-201ENST00000309615 CCDC146Q8IYE0 955 aa17.12■□□□□ 0.33
APTX-201ENST00000309615 ZNF530Q6P9A1 599 aaPredicted RBP17.12■□□□□ 0.33
APTX-201ENST00000309615 EP400Q96L91 3159 aa17.11■□□□□ 0.33
APTX-201ENST00000309615 FAM9BQ8IZU0 186 aa17.11■□□□□ 0.33
APTX-201ENST00000309615 PNNQ9H307 717 aaKnown RBP17.11■□□□□ 0.33
APTX-201ENST00000309615 PHKG2P15735 406 aa17.1■□□□□ 0.33
APTX-201ENST00000309615 IFNL2Q8IZJ0 200 aa17.1■□□□□ 0.33
APTX-201ENST00000309615 MAPK8IP3Q9UPT6 1336 aa17.09■□□□□ 0.33
APTX-201ENST00000309615 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
APTX-201ENST00000309615 NEFMP07197 916 aa17.08■□□□□ 0.33
APTX-201ENST00000309615 C1orf141Q5JVX7 400 aa17.08■□□□□ 0.33
APTX-201ENST00000309615 GAS2L2Q8NHY3 880 aa17.08■□□□□ 0.33
APTX-201ENST00000309615 RUNDC1Q96C34 613 aa17.08■□□□□ 0.33
APTX-201ENST00000309615 NKX1-1Q15270 411 aaPredicted RBP17.07■□□□□ 0.32
APTX-201ENST00000309615 AKAP4Q5JQC9 854 aa17.07■□□□□ 0.32
APTX-201ENST00000309615 BCL9O00512 1426 aa17.06■□□□□ 0.32
APTX-201ENST00000309615 MPRIPQ6WCQ1 1025 aa17.05■□□□□ 0.32
APTX-201ENST00000309615 ACSBG1Q96GR2 724 aa17.05■□□□□ 0.32
APTX-201ENST00000309615 NFE2L2Q16236 605 aa17.05■□□□□ 0.32
APTX-201ENST00000309615 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
APTX-201ENST00000309615 HSP90AB1P08238 724 aaKnown RBP17.04■□□□□ 0.32
APTX-201ENST00000309615 DCAF5Q96JK2 942 aa17.04■□□□□ 0.32
APTX-201ENST00000309615 MAP3K5Q99683 1374 aa17.04■□□□□ 0.32
APTX-201ENST00000309615 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
APTX-201ENST00000309615 APAF1O14727 1248 aa17.03■□□□□ 0.32
APTX-201ENST00000309615 KCNQ2O43526 872 aa17.03■□□□□ 0.32
APTX-201ENST00000309615 PTF1AQ7RTS3 328 aa17.03■□□□□ 0.32
APTX-201ENST00000309615 RRP7AQ9Y3A4 280 aaKnown RBP17.03■□□□□ 0.32
APTX-201ENST00000309615 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
APTX-201ENST00000309615 TRIM37O94972 964 aa17.03■□□□□ 0.32
APTX-201ENST00000309615 TMPOP42166 694 aaKnown RBP17.03■□□□□ 0.32
APTX-201ENST00000309615 LGR6Q9HBX8 967 aa17.03■□□□□ 0.32
APTX-201ENST00000309615 PRIM1P49642 420 aaKnown RBP17.02■□□□□ 0.32
APTX-201ENST00000309615 NEUROD2Q15784 382 aa17.02■□□□□ 0.32
APTX-201ENST00000309615 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.32
APTX-201ENST00000309615 TOGARAM1Q9Y4F4 1720 aa17.02■□□□□ 0.31
APTX-201ENST00000309615 RIPK4P57078 832 aa17.01■□□□□ 0.31
APTX-201ENST00000309615 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
APTX-201ENST00000309615 RNMTO43148 476 aaKnown RBP17.01■□□□□ 0.31
APTX-201ENST00000309615 IL17REQ8NFR9 667 aa17.01■□□□□ 0.31
APTX-201ENST00000309615 SBF2Q86WG5 1849 aa17■□□□□ 0.31
APTX-201ENST00000309615 DCTN1Q14203 1278 aa17■□□□□ 0.31
APTX-201ENST00000309615 MCM10Q7L590 875 aa17■□□□□ 0.31
APTX-201ENST00000309615 RTF1Q92541 710 aaKnown RBP16.99■□□□□ 0.31
APTX-201ENST00000309615 BCL11BQ9C0K0 894 aaPredicted RBP16.99■□□□□ 0.31
APTX-201ENST00000309615 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
APTX-201ENST00000309615 NHSQ6T4R5 1651 aa16.98■□□□□ 0.31
APTX-201ENST00000309615 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
APTX-201ENST00000309615 HTATSF1O43719 755 aaKnown RBP16.98■□□□□ 0.31
APTX-201ENST00000309615 ADAMTS7Q9UKP4 1686 aa16.98■□□□□ 0.31
APTX-201ENST00000309615 CEMIPQ8WUJ3 1361 aa16.97■□□□□ 0.31
APTX-201ENST00000309615 SCN11AQ9UI33 1791 aa16.97■□□□□ 0.31
APTX-201ENST00000309615 CABP4P57796 275 aa16.97■□□□□ 0.31
APTX-201ENST00000309615 UPF1Q92900 1129 aaKnown RBP eCLIP16.97■□□□□ 0.31
APTX-201ENST00000309615 NFATC2IPQ8NCF5 419 aa16.97■□□□□ 0.31
APTX-201ENST00000309615 PIGBQ92521 554 aa16.97■□□□□ 0.31
APTX-201ENST00000309615 THUMPD2Q9BTF0 503 aaKnown RBP16.97■□□□□ 0.31
APTX-201ENST00000309615 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
APTX-201ENST00000309615 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
APTX-201ENST00000309615 KAT6BQ8WYB5 2073 aa16.96■□□□□ 0.31
APTX-201ENST00000309615 SLC52A2Q9HAB3 445 aa16.96■□□□□ 0.31
APTX-201ENST00000309615 ITGB4P16144 1822 aa16.95■□□□□ 0.3
APTX-201ENST00000309615 MRC1P22897 1456 aa16.95■□□□□ 0.3
APTX-201ENST00000309615 LMOD3Q0VAK6 560 aa16.95■□□□□ 0.3
APTX-201ENST00000309615 SALL2Q9Y467 1007 aaPredicted RBP16.95■□□□□ 0.3
APTX-201ENST00000309615 TNS1Q9HBL0 1735 aaKnown RBP16.94■□□□□ 0.3
APTX-201ENST00000309615 VIRMAQ69YN4 1812 aaKnown RBP16.94■□□□□ 0.3
APTX-201ENST00000309615 APBA3O96018 575 aa16.94■□□□□ 0.3
APTX-201ENST00000309615 TEFQ10587 303 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms