RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 GLI3P10071 1580 aa22.6■■□□□ 1.21
NDUFA11-201ENST00000308961 PLEKHO1Q53GL0 409 aaPredicted RBP22.6■■□□□ 1.21
NDUFA11-201ENST00000308961 BARGINQ6ZT62 677 aa22.6■■□□□ 1.21
NDUFA11-201ENST00000308961 YTHDC1Q96MU7 727 aaKnown RBP22.6■■□□□ 1.21
NDUFA11-201ENST00000308961 SALL2Q9Y467 1007 aaPredicted RBP22.6■■□□□ 1.21
NDUFA11-201ENST00000308961 OVOS2A0A0G2JMS6 1433 aa22.59■■□□□ 1.21
NDUFA11-201ENST00000308961 NEUROD2Q15784 382 aa22.59■■□□□ 1.21
NDUFA11-201ENST00000308961 NFE2L2Q16236 605 aa22.59■■□□□ 1.21
NDUFA11-201ENST00000308961 FAM98CQ17RN3 349 aaKnown RBP22.59■■□□□ 1.21
NDUFA11-201ENST00000308961 ZNF772Q68DY9 489 aaPredicted RBP22.59■■□□□ 1.21
NDUFA11-201ENST00000308961 NEFMP07197 916 aa22.58■■□□□ 1.21
NDUFA11-201ENST00000308961 HNRNPUQ00839 825 aaKnown RBP eCLIP22.58■■□□□ 1.21
NDUFA11-201ENST00000308961 RIPK4P57078 832 aa22.56■■□□□ 1.2
NDUFA11-201ENST00000308961 AMOTQ4VCS5 1084 aa22.56■■□□□ 1.2
NDUFA11-201ENST00000308961 ZCRB1Q8TBF4 217 aaKnown RBP22.56■■□□□ 1.2
NDUFA11-201ENST00000308961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.56■■□□□ 1.2
NDUFA11-201ENST00000308961 WNK3Q9BYP7 1800 aa22.55■■□□□ 1.2
NDUFA11-201ENST00000308961 ZNF530Q6P9A1 599 aaPredicted RBP22.55■■□□□ 1.2
NDUFA11-201ENST00000308961 POTEAQ6S8J7 498 aa22.55■■□□□ 1.2
NDUFA11-201ENST00000308961 GAS2L2Q8NHY3 880 aa22.55■■□□□ 1.2
NDUFA11-201ENST00000308961 SPG7Q9UQ90 795 aa22.55■■□□□ 1.2
NDUFA11-201ENST00000308961 PARP4Q9UKK3 1724 aaKnown RBP22.54■■□□□ 1.2
NDUFA11-201ENST00000308961 CDCA7Q9BWT1 371 aaPredicted RBP22.54■■□□□ 1.2
NDUFA11-201ENST00000308961 TRIM35Q9UPQ4 493 aa22.54■■□□□ 1.2
NDUFA11-201ENST00000308961 CYP27B1O15528 508 aa22.53■■□□□ 1.2
NDUFA11-201ENST00000308961 ONECUT3O60422 494 aaPredicted RBP22.53■■□□□ 1.2
NDUFA11-201ENST00000308961 PKD1L3Q7Z443 1732 aa22.53■■□□□ 1.2
NDUFA11-201ENST00000308961 EXOC5O00471 708 aa22.52■■□□□ 1.2
NDUFA11-201ENST00000308961 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
NDUFA11-201ENST00000308961 PLEKHG2Q9H7P9 1386 aa22.51■■□□□ 1.19
NDUFA11-201ENST00000308961 PHKG2P15735 406 aa22.51■■□□□ 1.19
NDUFA11-201ENST00000308961 DDX54Q8TDD1 881 aaKnown RBP22.51■■□□□ 1.19
NDUFA11-201ENST00000308961 RBM6P78332 1123 aaKnown RBP22.5■■□□□ 1.19
NDUFA11-201ENST00000308961 DCTN1Q14203 1278 aa22.5■■□□□ 1.19
NDUFA11-201ENST00000308961 SHANK3Q9BYB0 1731 aa22.5■■□□□ 1.19
NDUFA11-201ENST00000308961 THSD7AQ9UPZ6 1657 aa22.49■■□□□ 1.19
NDUFA11-201ENST00000308961 DLG5Q8TDM6 1919 aa22.49■■□□□ 1.19
NDUFA11-201ENST00000308961 DDB1Q16531 1140 aa22.49■■□□□ 1.19
NDUFA11-201ENST00000308961 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
NDUFA11-201ENST00000308961 THUMPD2Q9BTF0 503 aaKnown RBP22.49■■□□□ 1.19
NDUFA11-201ENST00000308961 GNAT3A8MTJ3 354 aa22.48■■□□□ 1.19
NDUFA11-201ENST00000308961 NCBP3Q53F19 620 aaKnown RBP22.48■■□□□ 1.19
NDUFA11-201ENST00000308961 MCM10Q7L590 875 aa22.48■■□□□ 1.19
NDUFA11-201ENST00000308961 WWC1Q8IX03 1113 aa22.48■■□□□ 1.19
NDUFA11-201ENST00000308961 SEPT12Q8IYM1 358 aa22.48■■□□□ 1.19
NDUFA11-201ENST00000308961 IFNL2Q8IZJ0 200 aa22.48■■□□□ 1.19
NDUFA11-201ENST00000308961 IL17REQ8NFR9 667 aa22.48■■□□□ 1.19
NDUFA11-201ENST00000308961 LGR6Q9HBX8 967 aa22.48■■□□□ 1.19
NDUFA11-201ENST00000308961 MAP3K5Q99683 1374 aa22.48■■□□□ 1.19
NDUFA11-201ENST00000308961 LRRC37A3O60309 1634 aa22.47■■□□□ 1.19
NDUFA11-201ENST00000308961 A0A0G2JS52 829 aa22.47■■□□□ 1.19
NDUFA11-201ENST00000308961 MYT1Q01538 1121 aa22.47■■□□□ 1.19
NDUFA11-201ENST00000308961 CCDC27Q2M243 656 aa22.47■■□□□ 1.19
NDUFA11-201ENST00000308961 C1orf141Q5JVX7 400 aa22.47■■□□□ 1.19
NDUFA11-201ENST00000308961 MPRIPQ6WCQ1 1025 aa22.47■■□□□ 1.19
NDUFA11-201ENST00000308961 MARCH10Q8NA82 808 aaPredicted RBP22.47■■□□□ 1.19
NDUFA11-201ENST00000308961 ZNF521Q96K83 1311 aa22.47■■□□□ 1.19
NDUFA11-201ENST00000308961 PCDH11XQ9BZA7 1347 aa22.47■■□□□ 1.19
NDUFA11-201ENST00000308961 PCDH11YQ9BZA8 1340 aa22.47■■□□□ 1.19
NDUFA11-201ENST00000308961 TNS2Q63HR2 1409 aa22.47■■□□□ 1.19
NDUFA11-201ENST00000308961 RXRBP28702 533 aa22.46■■□□□ 1.19
NDUFA11-201ENST00000308961 NGEFQ8N5V2 710 aa22.46■■□□□ 1.19
NDUFA11-201ENST00000308961 HTATSF1O43719 755 aaKnown RBP22.45■■□□□ 1.18
NDUFA11-201ENST00000308961 RNMTO43148 476 aaKnown RBP22.44■■□□□ 1.18
NDUFA11-201ENST00000308961 NKX1-1Q15270 411 aaPredicted RBP22.44■■□□□ 1.18
NDUFA11-201ENST00000308961 ZBED9Q6R2W3 1325 aa22.44■■□□□ 1.18
NDUFA11-201ENST00000308961 KDM6AO15550 1401 aaPredicted RBP22.43■■□□□ 1.18
NDUFA11-201ENST00000308961 LMOD3Q0VAK6 560 aa22.42■■□□□ 1.18
NDUFA11-201ENST00000308961 RTF1Q92541 710 aaKnown RBP22.42■■□□□ 1.18
NDUFA11-201ENST00000308961 CDCA7LQ96GN5 454 aa22.41■■□□□ 1.18
NDUFA11-201ENST00000308961 SPINK5Q9NQ38 1064 aaPredicted RBP22.41■■□□□ 1.18
NDUFA11-201ENST00000308961 PDE3BQ13370 1112 aa22.4■■□□□ 1.18
NDUFA11-201ENST00000308961 FAM182BQ5T319 152 aa22.4■■□□□ 1.18
NDUFA11-201ENST00000308961 DCAF5Q96JK2 942 aa22.4■■□□□ 1.18
NDUFA11-201ENST00000308961 CEMIPQ8WUJ3 1361 aa22.39■■□□□ 1.18
NDUFA11-201ENST00000308961 HSP90AB1P08238 724 aaKnown RBP22.39■■□□□ 1.17
NDUFA11-201ENST00000308961 WDR63Q8IWG1 891 aa22.39■■□□□ 1.17
NDUFA11-201ENST00000308961 ADAMTS7Q9UKP4 1686 aa22.39■■□□□ 1.17
NDUFA11-201ENST00000308961 RGS12O14924 1447 aa22.37■■□□□ 1.17
NDUFA11-201ENST00000308961 BRWD3Q6RI45 1802 aa22.36■■□□□ 1.17
NDUFA11-201ENST00000308961 SCN11AQ9UI33 1791 aa22.35■■□□□ 1.17
NDUFA11-201ENST00000308961 GOLGA2Q08379 1002 aa22.35■■□□□ 1.17
NDUFA11-201ENST00000308961 MIS18AQ9NYP9 233 aa22.35■■□□□ 1.17
NDUFA11-201ENST00000308961 ZNF853P0CG23 659 aa22.34■■□□□ 1.17
NDUFA11-201ENST00000308961 SLFN5Q08AF3 891 aa22.34■■□□□ 1.17
NDUFA11-201ENST00000308961 KRT27Q7Z3Y8 459 aa22.34■■□□□ 1.17
NDUFA11-201ENST00000308961 LAS1LQ9Y4W2 734 aaKnown RBP22.34■■□□□ 1.17
NDUFA11-201ENST00000308961 TOGARAM1Q9Y4F4 1720 aa22.34■■□□□ 1.17
NDUFA11-201ENST00000308961 VIRMAQ69YN4 1812 aaKnown RBP22.34■■□□□ 1.17
NDUFA11-201ENST00000308961 IL16Q14005 1332 aa22.33■■□□□ 1.17
NDUFA11-201ENST00000308961 ERVV-2B6SEH9 535 aa22.33■■□□□ 1.17
NDUFA11-201ENST00000308961 NFATC2IPQ8NCF5 419 aa22.33■■□□□ 1.17
NDUFA11-201ENST00000308961 SLC52A2Q9HAB3 445 aa22.33■■□□□ 1.17
NDUFA11-201ENST00000308961 TEFQ10587 303 aa22.32■■□□□ 1.16
NDUFA11-201ENST00000308961 TAF7Q15545 349 aaPredicted RBP22.32■■□□□ 1.16
NDUFA11-201ENST00000308961 ACSBG1Q96GR2 724 aa22.32■■□□□ 1.16
NDUFA11-201ENST00000308961 CHL1O00533 1208 aa22.31■■□□□ 1.16
NDUFA11-201ENST00000308961 PRIM1P49642 420 aaKnown RBP22.31■■□□□ 1.16
NDUFA11-201ENST00000308961 CABP4P57796 275 aa22.31■■□□□ 1.16
NDUFA11-201ENST00000308961 TRMT2AQ8IZ69 625 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms