RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 SYTL4Q96C24 671 aaPredicted RBP23.4■■□□□ 1.34
HMGCLL1-202ENST00000308161 TATP17735 454 aaPredicted RBP23.39■■□□□ 1.34
HMGCLL1-202ENST00000308161 PROM2Q8N271 834 aa23.39■■□□□ 1.34
HMGCLL1-202ENST00000308161 LRP5O75197 1615 aa23.39■■□□□ 1.33
HMGCLL1-202ENST00000308161 ANO8Q9HCE9 1232 aaPredicted RBP23.38■■□□□ 1.33
HMGCLL1-202ENST00000308161 POLKQ9UBT6 870 aa23.38■■□□□ 1.33
HMGCLL1-202ENST00000308161 ANKRD26Q9UPS8 1709 aa23.38■■□□□ 1.33
HMGCLL1-202ENST00000308161 KIF7Q2M1P5 1343 aa23.37■■□□□ 1.33
HMGCLL1-202ENST00000308161 MAP2P11137 1827 aaKnown RBP23.37■■□□□ 1.33
HMGCLL1-202ENST00000308161 BTAF1O14981 1849 aa23.35■■□□□ 1.33
HMGCLL1-202ENST00000308161 KNSTRNQ9Y448 316 aa23.35■■□□□ 1.33
HMGCLL1-202ENST00000308161 WASHC2AQ641Q2 1341 aa23.35■■□□□ 1.33
HMGCLL1-202ENST00000308161 PRIM1P49642 420 aaKnown RBP23.34■■□□□ 1.33
HMGCLL1-202ENST00000308161 SHANK3Q9BYB0 1731 aa23.34■■□□□ 1.33
HMGCLL1-202ENST00000308161 MORC1Q86VD1 984 aa23.33■■□□□ 1.33
HMGCLL1-202ENST00000308161 NSD2O96028 1365 aa23.33■■□□□ 1.33
HMGCLL1-202ENST00000308161 DOT1LQ8TEK3 1739 aa23.33■■□□□ 1.33
HMGCLL1-202ENST00000308161 STK32BQ9NY57 414 aa23.33■■□□□ 1.32
HMGCLL1-202ENST00000308161 PCDH11XQ9BZA7 1347 aa23.31■■□□□ 1.32
HMGCLL1-202ENST00000308161 PCDH11YQ9BZA8 1340 aa23.31■■□□□ 1.32
HMGCLL1-202ENST00000308161 EYA1Q99502 592 aa23.31■■□□□ 1.32
HMGCLL1-202ENST00000308161 EIF4A2Q14240 407 aaKnown RBP23.29■■□□□ 1.32
HMGCLL1-202ENST00000308161 SLC15A2Q16348 729 aa23.28■■□□□ 1.32
HMGCLL1-202ENST00000308161 PDGFDQ9GZP0 370 aaPredicted RBP23.28■■□□□ 1.32
HMGCLL1-202ENST00000308161 SPON1Q9HCB6 807 aa23.26■■□□□ 1.31
HMGCLL1-202ENST00000308161 CYP27B1O15528 508 aa23.25■■□□□ 1.31
HMGCLL1-202ENST00000308161 KCNQ4P56696 695 aa23.25■■□□□ 1.31
HMGCLL1-202ENST00000308161 CNGB1Q14028 1251 aaPredicted RBP23.25■■□□□ 1.31
HMGCLL1-202ENST00000308161 LRRC4BQ9NT99 713 aa23.25■■□□□ 1.31
HMGCLL1-202ENST00000308161 PPP1R1BQ9UD71 204 aaPredicted RBP23.25■■□□□ 1.31
HMGCLL1-202ENST00000308161 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
HMGCLL1-202ENST00000308161 ZBTB7AO95365 584 aa23.24■■□□□ 1.31
HMGCLL1-202ENST00000308161 SPG7Q9UQ90 795 aa23.24■■□□□ 1.31
HMGCLL1-202ENST00000308161 AMER1Q5JTC6 1135 aaPredicted RBP23.23■■□□□ 1.31
HMGCLL1-202ENST00000308161 CC2D1BQ5T0F9 858 aaKnown RBP23.22■■□□□ 1.31
HMGCLL1-202ENST00000308161 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
HMGCLL1-202ENST00000308161 PKD1L3Q7Z443 1732 aa23.21■■□□□ 1.31
HMGCLL1-202ENST00000308161 CASZ1Q86V15 1759 aa23.21■■□□□ 1.31
HMGCLL1-202ENST00000308161 ZNF827Q17R98 1081 aa23.21■■□□□ 1.31
HMGCLL1-202ENST00000308161 SLC27A3Q5K4L6 730 aa23.21■■□□□ 1.31
HMGCLL1-202ENST00000308161 PAPPAQ13219 1627 aa23.2■■□□□ 1.3
HMGCLL1-202ENST00000308161 ATF5Q9Y2D1 282 aaPredicted RBP23.2■■□□□ 1.3
HMGCLL1-202ENST00000308161 CCNL1Q9UK58 526 aaPredicted RBP23.19■■□□□ 1.3
HMGCLL1-202ENST00000308161 IGSF1Q8N6C5 1336 aa23.19■■□□□ 1.3
HMGCLL1-202ENST00000308161 TOGARAM1Q9Y4F4 1720 aa23.17■■□□□ 1.3
HMGCLL1-202ENST00000308161 PER1O15534 1290 aaPredicted RBP23.16■■□□□ 1.3
HMGCLL1-202ENST00000308161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.16■■□□□ 1.3
HMGCLL1-202ENST00000308161 AEBP1Q8IUX7 1158 aa23.15■■□□□ 1.3
HMGCLL1-202ENST00000308161 IFNL2Q8IZJ0 200 aa23.15■■□□□ 1.3
HMGCLL1-202ENST00000308161 LY75O60449 1722 aa23.14■■□□□ 1.3
HMGCLL1-202ENST00000308161 PHKG2P15735 406 aa23.14■■□□□ 1.3
HMGCLL1-202ENST00000308161 AKT1S1Q96B36 256 aa23.14■■□□□ 1.3
HMGCLL1-202ENST00000308161 PALLDQ8WX93 1383 aa23.14■■□□□ 1.29
HMGCLL1-202ENST00000308161 MTHFSP49914 203 aa23.13■■□□□ 1.29
HMGCLL1-202ENST00000308161 TFCP2L1Q9NZI6 479 aa23.13■■□□□ 1.29
HMGCLL1-202ENST00000308161 NKX1-1Q15270 411 aaPredicted RBP23.12■■□□□ 1.29
HMGCLL1-202ENST00000308161 SULT6B1Q6IMI4 303 aa23.12■■□□□ 1.29
HMGCLL1-202ENST00000308161 MTFR1LQ9H019 292 aa23.12■■□□□ 1.29
HMGCLL1-202ENST00000308161 PLEKHO1Q53GL0 409 aaPredicted RBP23.11■■□□□ 1.29
HMGCLL1-202ENST00000308161 PIGBQ92521 554 aa23.11■■□□□ 1.29
HMGCLL1-202ENST00000308161 TMOD3Q9NYL9 352 aa23.11■■□□□ 1.29
HMGCLL1-202ENST00000308161 ITGB4P16144 1822 aa23.11■■□□□ 1.29
HMGCLL1-202ENST00000308161 IL13P35225 146 aa23.1■■□□□ 1.29
HMGCLL1-202ENST00000308161 PTGER2P43116 358 aa23.09■■□□□ 1.29
HMGCLL1-202ENST00000308161 ZNF530Q6P9A1 599 aaPredicted RBP23.09■■□□□ 1.29
HMGCLL1-202ENST00000308161 SMARCC1Q92922 1105 aaPredicted RBP23.08■■□□□ 1.29
HMGCLL1-202ENST00000308161 PNPLA7Q6ZV29 1317 aa23.08■■□□□ 1.29
HMGCLL1-202ENST00000308161 MSH5O43196 834 aa23.08■■□□□ 1.28
HMGCLL1-202ENST00000308161 AMOTQ4VCS5 1084 aa23.06■■□□□ 1.28
HMGCLL1-202ENST00000308161 TUBGCP6Q96RT7 1819 aa23.05■■□□□ 1.28
HMGCLL1-202ENST00000308161 PLEKHG2Q9H7P9 1386 aa23.05■■□□□ 1.28
HMGCLL1-202ENST00000308161 HSP90AB1P08238 724 aaKnown RBP23.05■■□□□ 1.28
HMGCLL1-202ENST00000308161 HMOX1P09601 288 aa23.05■■□□□ 1.28
HMGCLL1-202ENST00000308161 C1orf141Q5JVX7 400 aa23.05■■□□□ 1.28
HMGCLL1-202ENST00000308161 C5P01031 1676 aa23.04■■□□□ 1.28
HMGCLL1-202ENST00000308161 DIAPH1O60610 1272 aaKnown RBP23.04■■□□□ 1.28
HMGCLL1-202ENST00000308161 ASAP1Q9ULH1 1129 aa23.04■■□□□ 1.28
HMGCLL1-202ENST00000308161 NPC1L1Q9UHC9 1359 aa23.03■■□□□ 1.28
HMGCLL1-202ENST00000308161 DCAF5Q96JK2 942 aa23.03■■□□□ 1.28
HMGCLL1-202ENST00000308161 QSER1Q2KHR3 1735 aa23.02■■□□□ 1.28
HMGCLL1-202ENST00000308161 KDRP35968 1356 aa23.02■■□□□ 1.28
HMGCLL1-202ENST00000308161 LOC102724428A0A0B4J2F2 783 aa23.01■■□□□ 1.27
HMGCLL1-202ENST00000308161 SIK1P57059 783 aa23.01■■□□□ 1.27
HMGCLL1-202ENST00000308161 SLC16A10Q8TF71 515 aa23.01■■□□□ 1.27
HMGCLL1-202ENST00000308161 AK7Q96M32 723 aa23.01■■□□□ 1.27
HMGCLL1-202ENST00000308161 ARXQ96QS3 562 aa23.01■■□□□ 1.27
HMGCLL1-202ENST00000308161 SGIP1Q9BQI5 828 aa23.01■■□□□ 1.27
HMGCLL1-202ENST00000308161 FHDC1Q9C0D6 1143 aaPredicted RBP23.01■■□□□ 1.27
HMGCLL1-202ENST00000308161 ERVV-2B6SEH9 535 aa23■■□□□ 1.27
HMGCLL1-202ENST00000308161 CABP4P57796 275 aa23■■□□□ 1.27
HMGCLL1-202ENST00000308161 COL23A1Q86Y22 540 aaPredicted RBP23■■□□□ 1.27
HMGCLL1-202ENST00000308161 KLHL34Q8N239 644 aa23■■□□□ 1.27
HMGCLL1-202ENST00000308161 ATG3Q9NT62 314 aa23■■□□□ 1.27
HMGCLL1-202ENST00000308161 KDM6AO15550 1401 aaPredicted RBP23■■□□□ 1.27
HMGCLL1-202ENST00000308161 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
HMGCLL1-202ENST00000308161 U2SURPO15042 1029 aaKnown RBP22.99■■□□□ 1.27
HMGCLL1-202ENST00000308161 POLD1P28340 1107 aa22.99■■□□□ 1.27
HMGCLL1-202ENST00000308161 TAF1LQ8IZX4 1826 aa22.98■■□□□ 1.27
HMGCLL1-202ENST00000308161 ATP6V1AP38606 617 aa22.98■■□□□ 1.27
HMGCLL1-202ENST00000308161 C4BP0C0L5 1744 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms