RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 EIF4A2Q14240 407 aaKnown RBP20.45■□□□□ 0.86
SSH3-201ENST00000308127 EXOC6BQ9Y2D4 811 aa20.45■□□□□ 0.86
SSH3-201ENST00000308127 RABEP1Q15276 862 aa20.44■□□□□ 0.86
SSH3-201ENST00000308127 ANKRD44Q8N8A2 993 aa20.44■□□□□ 0.86
SSH3-201ENST00000308127 CPS1P31327 1500 aa20.44■□□□□ 0.86
SSH3-201ENST00000308127 ARHGAP31Q2M1Z3 1444 aa20.44■□□□□ 0.86
SSH3-201ENST00000308127 INTS3Q68E01 1043 aaKnown RBP20.43■□□□□ 0.86
SSH3-201ENST00000308127 NSFL1CQ9UNZ2 370 aaKnown RBP20.43■□□□□ 0.86
SSH3-201ENST00000308127 METP08581 1390 aa20.43■□□□□ 0.86
SSH3-201ENST00000308127 KLHL40Q2TBA0 621 aa20.42■□□□□ 0.86
SSH3-201ENST00000308127 LMOD3Q0VAK6 560 aa20.42■□□□□ 0.86
SSH3-201ENST00000308127 PREX1Q8TCU6 1659 aa20.42■□□□□ 0.86
SSH3-201ENST00000308127 DTNBO60941 627 aa20.41■□□□□ 0.86
SSH3-201ENST00000308127 ZSCAN23Q3MJ62 389 aa20.41■□□□□ 0.86
SSH3-201ENST00000308127 ATP10DQ9P241 1426 aa20.41■□□□□ 0.86
SSH3-201ENST00000308127 LMBRD1Q9NUN5 540 aa20.41■□□□□ 0.86
SSH3-201ENST00000308127 DLG5Q8TDM6 1919 aa20.41■□□□□ 0.86
SSH3-201ENST00000308127 RBSNQ9H1K0 784 aa20.4■□□□□ 0.86
SSH3-201ENST00000308127 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.4■□□□□ 0.86
SSH3-201ENST00000308127 ZDHHC9Q9Y397 364 aa20.4■□□□□ 0.86
SSH3-201ENST00000308127 RTL1A6NKG5 1358 aa20.4■□□□□ 0.86
SSH3-201ENST00000308127 PRIM1P49642 420 aaKnown RBP20.4■□□□□ 0.86
SSH3-201ENST00000308127 HSP90AA2PQ14568 343 aaPredicted RBP20.4■□□□□ 0.86
SSH3-201ENST00000308127 PRR36Q9H6K5 1346 aa20.39■□□□□ 0.86
SSH3-201ENST00000308127 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
SSH3-201ENST00000308127 RNF214Q8ND24 703 aa20.39■□□□□ 0.85
SSH3-201ENST00000308127 GPT2Q8TD30 523 aa20.39■□□□□ 0.85
SSH3-201ENST00000308127 CCDC61Q9Y6R9 512 aa20.39■□□□□ 0.85
SSH3-201ENST00000308127 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.85
SSH3-201ENST00000308127 NEK4P51957 841 aa20.38■□□□□ 0.85
SSH3-201ENST00000308127 MPNDQ8N594 471 aa20.38■□□□□ 0.85
SSH3-201ENST00000308127 CLTCQ00610 1675 aaKnown RBP20.38■□□□□ 0.85
SSH3-201ENST00000308127 CDC42BPGQ6DT37 1551 aa20.38■□□□□ 0.85
SSH3-201ENST00000308127 RGS12O14924 1447 aa20.38■□□□□ 0.85
SSH3-201ENST00000308127 ANP32BQ92688 251 aaKnown RBP20.37■□□□□ 0.85
SSH3-201ENST00000308127 ISY1Q9ULR0 285 aaKnown RBP20.37■□□□□ 0.85
SSH3-201ENST00000308127 EDC4Q6P2E9 1401 aaKnown RBP20.37■□□□□ 0.85
SSH3-201ENST00000308127 RILPL2Q969X0 211 aa20.36■□□□□ 0.85
SSH3-201ENST00000308127 PALD1Q9ULE6 856 aa20.36■□□□□ 0.85
SSH3-201ENST00000308127 SYCE3A1L190 88 aa20.36■□□□□ 0.85
SSH3-201ENST00000308127 ST18O60284 1047 aa20.36■□□□□ 0.85
SSH3-201ENST00000308127 CHL1O00533 1208 aa20.36■□□□□ 0.85
SSH3-201ENST00000308127 ATP7BP35670 1465 aa20.36■□□□□ 0.85
SSH3-201ENST00000308127 CCDC173Q0VFZ6 552 aa20.36■□□□□ 0.85
SSH3-201ENST00000308127 CASC1Q6TDU7 716 aa20.36■□□□□ 0.85
SSH3-201ENST00000308127 KIAA1211Q6ZU35 1233 aa20.36■□□□□ 0.85
SSH3-201ENST00000308127 CPSF1Q10570 1443 aaKnown RBP20.35■□□□□ 0.85
SSH3-201ENST00000308127 NUCB2P80303 420 aa20.35■□□□□ 0.85
SSH3-201ENST00000308127 RPAP2Q8IXW5 612 aaPredicted RBP20.35■□□□□ 0.85
SSH3-201ENST00000308127 GDPD2Q9HCC8 539 aa20.35■□□□□ 0.85
SSH3-201ENST00000308127 UPF3BQ9BZI7 483 aaKnown RBP20.35■□□□□ 0.85
SSH3-201ENST00000308127 TSPYL4Q9UJ04 414 aa20.35■□□□□ 0.85
SSH3-201ENST00000308127 CDK12Q9NYV4 1490 aaPredicted RBP20.34■□□□□ 0.85
SSH3-201ENST00000308127 TRIM6-TRIM34B2RNG4 842 aa20.34■□□□□ 0.85
SSH3-201ENST00000308127 NEO1Q92859 1461 aa20.34■□□□□ 0.85
SSH3-201ENST00000308127 MAP4K4O95819 1239 aaPredicted RBP20.34■□□□□ 0.85
SSH3-201ENST00000308127 CYP2E1P05181 493 aaPredicted RBP20.34■□□□□ 0.85
SSH3-201ENST00000308127 ARID3AQ99856 593 aa20.34■□□□□ 0.85
SSH3-201ENST00000308127 PDE1AP54750 535 aa20.33■□□□□ 0.85
SSH3-201ENST00000308127 LARP6Q9BRS8 491 aaKnown RBP20.33■□□□□ 0.85
SSH3-201ENST00000308127 TMEM63CQ9P1W3 806 aa20.33■□□□□ 0.85
SSH3-201ENST00000308127 ERC2O15083 957 aa20.33■□□□□ 0.84
SSH3-201ENST00000308127 FAM69CQ0P6D2 419 aa20.32■□□□□ 0.84
SSH3-201ENST00000308127 VSIG10Q8N0Z9 540 aa20.32■□□□□ 0.84
SSH3-201ENST00000308127 ANO2Q9NQ90 1003 aa20.32■□□□□ 0.84
SSH3-201ENST00000308127 MSNP26038 577 aaKnown RBP20.32■□□□□ 0.84
SSH3-201ENST00000308127 RBM10P98175 930 aaKnown RBP20.32■□□□□ 0.84
SSH3-201ENST00000308127 XPCQ01831 940 aaPredicted RBP20.32■□□□□ 0.84
SSH3-201ENST00000308127 PNMA6EA0A0J9YXQ4 647 aa20.31■□□□□ 0.84
SSH3-201ENST00000308127 PTMSP20962 102 aa20.31■□□□□ 0.84
SSH3-201ENST00000308127 MTHFSDQ2M296 383 aaKnown RBP20.31■□□□□ 0.84
SSH3-201ENST00000308127 NUTM2GQ5VZR2 741 aa20.31■□□□□ 0.84
SSH3-201ENST00000308127 TMX3Q96JJ7 454 aa20.31■□□□□ 0.84
SSH3-201ENST00000308127 A2ML1A8K2U0 1454 aa20.31■□□□□ 0.84
SSH3-201ENST00000308127 ZSCAN30Q86W11 494 aa20.31■□□□□ 0.84
SSH3-201ENST00000308127 PPP1R9BQ96SB3 815 aa20.31■□□□□ 0.84
SSH3-201ENST00000308127 IL1RAPL2Q9NP60 686 aa20.31■□□□□ 0.84
SSH3-201ENST00000308127 REC8O95072 547 aa20.3■□□□□ 0.84
SSH3-201ENST00000308127 UNC5CLQ8IV45 518 aa20.3■□□□□ 0.84
SSH3-201ENST00000308127 ACEP12821 1306 aa20.3■□□□□ 0.84
SSH3-201ENST00000308127 RICTORQ6R327 1708 aa20.3■□□□□ 0.84
SSH3-201ENST00000308127 CLEC17AQ6ZS10 378 aa20.29■□□□□ 0.84
SSH3-201ENST00000308127 MAP3K19Q56UN5 1328 aa20.29■□□□□ 0.84
SSH3-201ENST00000308127 FKBP5Q13451 457 aaPredicted RBP20.29■□□□□ 0.84
SSH3-201ENST00000308127 IL25Q9H293 177 aa20.29■□□□□ 0.84
SSH3-201ENST00000308127 TTC21BQ7Z4L5 1316 aa20.29■□□□□ 0.84
SSH3-201ENST00000308127 R3HCC1Q9Y3T6 440 aaKnown RBP20.28■□□□□ 0.84
SSH3-201ENST00000308127 AATKQ6ZMQ8 1374 aa20.28■□□□□ 0.84
SSH3-201ENST00000308127 ZNF445P59923 1031 aa20.28■□□□□ 0.84
SSH3-201ENST00000308127 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
SSH3-201ENST00000308127 LTV1Q96GA3 475 aaPredicted RBP20.28■□□□□ 0.84
SSH3-201ENST00000308127 PLEKHG5O94827 1062 aa20.27■□□□□ 0.84
SSH3-201ENST00000308127 HMMRO75330 724 aa20.26■□□□□ 0.83
SSH3-201ENST00000308127 NUTM1Q86Y26 1132 aa20.26■□□□□ 0.83
SSH3-201ENST00000308127 SLC26A8Q96RN1 970 aa20.25■□□□□ 0.83
SSH3-201ENST00000308127 PTPRCP08575 1304 aa20.24■□□□□ 0.83
SSH3-201ENST00000308127 ESYT1Q9BSJ8 1104 aa20.24■□□□□ 0.83
SSH3-201ENST00000308127 LRRFIP2Q9Y608 721 aaKnown RBP20.24■□□□□ 0.83
SSH3-201ENST00000308127 GADD45BO75293 160 aaPredicted RBP20.24■□□□□ 0.83
SSH3-201ENST00000308127 GNAI2P04899 355 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms