RNA–Protein interactions for RNA: ENST00000307266.7

COPS9-201, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 1 (best) BASIC

Gene COPS9, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-201ENST00000307266 SPG7Q9UQ90 795 aa26.7■■□□□ 1.86
COPS9-201ENST00000307266 CCDC125Q86Z20 511 aa26.69■■□□□ 1.86
COPS9-201ENST00000307266 MARCH10Q8NA82 808 aaPredicted RBP26.69■■□□□ 1.86
COPS9-201ENST00000307266 PRKRIP1Q9H875 184 aaPredicted RBP26.69■■□□□ 1.86
COPS9-201ENST00000307266 ANP32CO43423 234 aa26.68■■□□□ 1.86
COPS9-201ENST00000307266 UPF1Q92900 1129 aaKnown RBP eCLIP26.68■■□□□ 1.86
COPS9-201ENST00000307266 PCDH11XQ9BZA7 1347 aa26.67■■□□□ 1.86
COPS9-201ENST00000307266 PCDH11YQ9BZA8 1340 aa26.67■■□□□ 1.86
COPS9-201ENST00000307266 COL3A1P02461 1466 aaPredicted RBP26.67■■□□□ 1.86
COPS9-201ENST00000307266 HMOX1P09601 288 aa26.65■■□□□ 1.86
COPS9-201ENST00000307266 PLEKHG2Q9H7P9 1386 aa26.64■■□□□ 1.86
COPS9-201ENST00000307266 PLEKHO1Q53GL0 409 aaPredicted RBP26.64■■□□□ 1.86
COPS9-201ENST00000307266 AEBP1Q8IUX7 1158 aa26.64■■□□□ 1.86
COPS9-201ENST00000307266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.64■■□□□ 1.86
COPS9-201ENST00000307266 RGPD1P0DJD0 1748 aa26.64■■□□□ 1.85
COPS9-201ENST00000307266 KDRP35968 1356 aa26.62■■□□□ 1.85
COPS9-201ENST00000307266 U2AF1L5P0DN76 240 aaPredicted RBP26.62■■□□□ 1.85
COPS9-201ENST00000307266 U2AF1Q01081 240 aaKnown RBP eCLIP26.62■■□□□ 1.85
COPS9-201ENST00000307266 AMOTQ4VCS5 1084 aa26.62■■□□□ 1.85
COPS9-201ENST00000307266 TRIM37O94972 964 aa26.61■■□□□ 1.85
COPS9-201ENST00000307266 BCL9O00512 1426 aa26.58■■□□□ 1.85
COPS9-201ENST00000307266 PKD1L3Q7Z443 1732 aa26.58■■□□□ 1.85
COPS9-201ENST00000307266 NEFMP07197 916 aa26.57■■□□□ 1.84
COPS9-201ENST00000307266 BAG6P46379 1132 aa26.57■■□□□ 1.84
COPS9-201ENST00000307266 C1orf141Q5JVX7 400 aa26.57■■□□□ 1.84
COPS9-201ENST00000307266 IFNL2Q8IZJ0 200 aa26.57■■□□□ 1.84
COPS9-201ENST00000307266 EP400Q96L91 3159 aa26.56■■□□□ 1.84
COPS9-201ENST00000307266 ZNF530Q6P9A1 599 aaPredicted RBP26.56■■□□□ 1.84
COPS9-201ENST00000307266 ACSBG1Q96GR2 724 aa26.56■■□□□ 1.84
COPS9-201ENST00000307266 BCL11BQ9C0K0 894 aaPredicted RBP26.55■■□□□ 1.84
COPS9-201ENST00000307266 SHANK3Q9BYB0 1731 aa26.54■■□□□ 1.84
COPS9-201ENST00000307266 CYP27B1O15528 508 aa26.54■■□□□ 1.84
COPS9-201ENST00000307266 APBA3O96018 575 aa26.54■■□□□ 1.84
COPS9-201ENST00000307266 WDR43Q15061 677 aaKnown RBP eCLIP26.54■■□□□ 1.84
COPS9-201ENST00000307266 SYTL4Q96C24 671 aaPredicted RBP26.54■■□□□ 1.84
COPS9-201ENST00000307266 PNNQ9H307 717 aaKnown RBP26.54■■□□□ 1.84
COPS9-201ENST00000307266 FCHSD2O94868 740 aa26.53■■□□□ 1.84
COPS9-201ENST00000307266 HSP90AB1P08238 724 aaKnown RBP26.53■■□□□ 1.84
COPS9-201ENST00000307266 PHKG2P15735 406 aa26.52■■□□□ 1.84
COPS9-201ENST00000307266 PRKAR2BP31323 418 aa26.52■■□□□ 1.84
COPS9-201ENST00000307266 SBF2Q86WG5 1849 aa26.5■■□□□ 1.83
COPS9-201ENST00000307266 RSPH6AQ9H0K4 717 aa26.49■■□□□ 1.83
COPS9-201ENST00000307266 KAT6BQ8WYB5 2073 aa26.49■■□□□ 1.83
COPS9-201ENST00000307266 PRIM1P49642 420 aaKnown RBP26.48■■□□□ 1.83
COPS9-201ENST00000307266 TNS1Q9HBL0 1735 aaKnown RBP26.48■■□□□ 1.83
COPS9-201ENST00000307266 NHSQ6T4R5 1651 aa26.47■■□□□ 1.83
COPS9-201ENST00000307266 KCNQ2O43526 872 aa26.47■■□□□ 1.83
COPS9-201ENST00000307266 NKX1-1Q15270 411 aaPredicted RBP26.47■■□□□ 1.83
COPS9-201ENST00000307266 GAS2L2Q8NHY3 880 aa26.47■■□□□ 1.83
COPS9-201ENST00000307266 DOT1LQ8TEK3 1739 aa26.47■■□□□ 1.83
COPS9-201ENST00000307266 AKAP4Q5JQC9 854 aa26.46■■□□□ 1.83
COPS9-201ENST00000307266 DEFB132Q7Z7B7 95 aa26.46■■□□□ 1.83
COPS9-201ENST00000307266 DCAF5Q96JK2 942 aa26.46■■□□□ 1.83
COPS9-201ENST00000307266 MAPK8IP3Q9UPT6 1336 aa26.45■■□□□ 1.83
COPS9-201ENST00000307266 EN1Q05925 392 aaPredicted RBP26.44■■□□□ 1.82
COPS9-201ENST00000307266 MTHFSDQ2M296 383 aaKnown RBP26.44■■□□□ 1.82
COPS9-201ENST00000307266 MPRIPQ6WCQ1 1025 aa26.42■■□□□ 1.82
COPS9-201ENST00000307266 MRS2Q9HD23 443 aa26.42■■□□□ 1.82
COPS9-201ENST00000307266 TMOD3Q9NYL9 352 aa26.42■■□□□ 1.82
COPS9-201ENST00000307266 PTF1AQ7RTS3 328 aa26.41■■□□□ 1.82
COPS9-201ENST00000307266 PLSCR1O15162 318 aa26.4■■□□□ 1.82
COPS9-201ENST00000307266 PHACTR3Q96KR7 559 aa26.4■■□□□ 1.82
COPS9-201ENST00000307266 GNAT3A8MTJ3 354 aa26.39■■□□□ 1.82
COPS9-201ENST00000307266 ERVV-2B6SEH9 535 aa26.39■■□□□ 1.82
COPS9-201ENST00000307266 CABP4P57796 275 aa26.39■■□□□ 1.82
COPS9-201ENST00000307266 MAP3K5Q99683 1374 aa26.38■■□□□ 1.81
COPS9-201ENST00000307266 RTF1Q92541 710 aaKnown RBP26.38■■□□□ 1.81
COPS9-201ENST00000307266 BTAF1O14981 1849 aa26.37■■□□□ 1.81
COPS9-201ENST00000307266 EZH2Q15910 746 aaKnown RBP26.37■■□□□ 1.81
COPS9-201ENST00000307266 DIEXFQ68CQ4 756 aaKnown RBP26.37■■□□□ 1.81
COPS9-201ENST00000307266 CAMKK2Q96RR4 588 aa26.36■■□□□ 1.81
COPS9-201ENST00000307266 TOGARAM1Q9Y4F4 1720 aa26.35■■□□□ 1.81
COPS9-201ENST00000307266 SMARCC1Q92922 1105 aaPredicted RBP26.34■■□□□ 1.81
COPS9-201ENST00000307266 ADAMTS8Q9UP79 889 aa26.34■■□□□ 1.81
COPS9-201ENST00000307266 KDM6AO15550 1401 aaPredicted RBP26.33■■□□□ 1.81
COPS9-201ENST00000307266 PIGBQ92521 554 aa26.33■■□□□ 1.81
COPS9-201ENST00000307266 PLEKHF1Q96S99 279 aa26.33■■□□□ 1.81
COPS9-201ENST00000307266 RGPD3A6NKT7 1758 aaPredicted RBP26.33■■□□□ 1.8
COPS9-201ENST00000307266 RGPD4Q7Z3J3 1758 aa26.33■■□□□ 1.8
COPS9-201ENST00000307266 ITGB4P16144 1822 aa26.32■■□□□ 1.8
COPS9-201ENST00000307266 RNMTO43148 476 aaKnown RBP26.32■■□□□ 1.8
COPS9-201ENST00000307266 TEFQ10587 303 aa26.32■■□□□ 1.8
COPS9-201ENST00000307266 NFE2L2Q16236 605 aa26.31■■□□□ 1.8
COPS9-201ENST00000307266 CCDC146Q8IYE0 955 aa26.31■■□□□ 1.8
COPS9-201ENST00000307266 RUNDC1Q96C34 613 aa26.31■■□□□ 1.8
COPS9-201ENST00000307266 TXNRD1Q16881 649 aa26.3■■□□□ 1.8
COPS9-201ENST00000307266 CCDC184Q52MB2 194 aa26.3■■□□□ 1.8
COPS9-201ENST00000307266 NFATC2IPQ8NCF5 419 aa26.3■■□□□ 1.8
COPS9-201ENST00000307266 LGR6Q9HBX8 967 aa26.3■■□□□ 1.8
COPS9-201ENST00000307266 SCN11AQ9UI33 1791 aa26.29■■□□□ 1.8
COPS9-201ENST00000307266 NBPF14Q5TI25 921 aa26.29■■□□□ 1.8
COPS9-201ENST00000307266 HTATSF1O43719 755 aaKnown RBP26.28■■□□□ 1.8
COPS9-201ENST00000307266 HMGB2P26583 209 aaKnown RBP26.28■■□□□ 1.8
COPS9-201ENST00000307266 SLC52A2Q9HAB3 445 aa26.28■■□□□ 1.8
COPS9-201ENST00000307266 PALLDQ8WX93 1383 aa26.28■■□□□ 1.8
COPS9-201ENST00000307266 SLC27A3Q5K4L6 730 aa26.27■■□□□ 1.8
COPS9-201ENST00000307266 LMOD3Q0VAK6 560 aa26.25■■□□□ 1.79
COPS9-201ENST00000307266 PNISRQ8TF01 805 aaKnown RBP26.25■■□□□ 1.79
COPS9-201ENST00000307266 CCNL1Q9UK58 526 aaPredicted RBP26.25■■□□□ 1.79
COPS9-201ENST00000307266 RIPK4P57078 832 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms