RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 XRCC6P12956 609 aaKnown RBP eCLIP18.8■□□□□ 0.6
CSDC2-201ENST00000306149 AKAP12Q02952 1782 aa18.8■□□□□ 0.6
CSDC2-201ENST00000306149 GOLGA6L3A6NEY3 463 aa18.79■□□□□ 0.6
CSDC2-201ENST00000306149 DDX11L8A8MPP1 907 aa18.79■□□□□ 0.6
CSDC2-201ENST00000306149 PANK2Q9BZ23 570 aa18.79■□□□□ 0.6
CSDC2-201ENST00000306149 ADAMTS13Q76LX8 1427 aa18.78■□□□□ 0.6
CSDC2-201ENST00000306149 SLC4A10Q6U841 1118 aa18.78■□□□□ 0.6
CSDC2-201ENST00000306149 ANKRD44Q8N8A2 993 aa18.78■□□□□ 0.6
CSDC2-201ENST00000306149 MSH6P52701 1360 aa18.78■□□□□ 0.6
CSDC2-201ENST00000306149 RGS12O14924 1447 aa18.77■□□□□ 0.6
CSDC2-201ENST00000306149 F6X3S4 739 aa18.77■□□□□ 0.6
CSDC2-201ENST00000306149 CEP85Q6P2H3 762 aa18.77■□□□□ 0.6
CSDC2-201ENST00000306149 G2E3Q7L622 706 aa18.77■□□□□ 0.6
CSDC2-201ENST00000306149 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.77■□□□□ 0.6
CSDC2-201ENST00000306149 PLEKHG3A1L390 1219 aa18.77■□□□□ 0.6
CSDC2-201ENST00000306149 MAP3K19Q56UN5 1328 aa18.77■□□□□ 0.6
CSDC2-201ENST00000306149 MTHFSDQ2M296 383 aaKnown RBP18.76■□□□□ 0.59
CSDC2-201ENST00000306149 NRKQ7Z2Y5 1582 aa18.76■□□□□ 0.59
CSDC2-201ENST00000306149 TTC22Q5TAA0 569 aa18.76■□□□□ 0.59
CSDC2-201ENST00000306149 CIZ1Q9ULV3 898 aaPredicted RBP18.76■□□□□ 0.59
CSDC2-201ENST00000306149 OVOS2A0A0J9YW53 1432 aa18.76■□□□□ 0.59
CSDC2-201ENST00000306149 OVOS2Q6IE36 1432 aa18.76■□□□□ 0.59
CSDC2-201ENST00000306149 K7ELQ4 463 aaPredicted RBP18.76■□□□□ 0.59
CSDC2-201ENST00000306149 GAS2L2Q8NHY3 880 aa18.76■□□□□ 0.59
CSDC2-201ENST00000306149 USP6P35125 1406 aa18.75■□□□□ 0.59
CSDC2-201ENST00000306149 ATP10DQ9P241 1426 aa18.75■□□□□ 0.59
CSDC2-201ENST00000306149 PEAK1Q9H792 1746 aa18.74■□□□□ 0.59
CSDC2-201ENST00000306149 RTL1A6NKG5 1358 aa18.74■□□□□ 0.59
CSDC2-201ENST00000306149 TSPYL4Q9UJ04 414 aa18.74■□□□□ 0.59
CSDC2-201ENST00000306149 KIF24Q5T7B8 1368 aa18.73■□□□□ 0.59
CSDC2-201ENST00000306149 NUTM2GQ5VZR2 741 aa18.73■□□□□ 0.59
CSDC2-201ENST00000306149 RPAP2Q8IXW5 612 aaPredicted RBP18.73■□□□□ 0.59
CSDC2-201ENST00000306149 NECTIN2Q92692 538 aa18.73■□□□□ 0.59
CSDC2-201ENST00000306149 AMOTL2Q9Y2J4 779 aa18.73■□□□□ 0.59
CSDC2-201ENST00000306149 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
CSDC2-201ENST00000306149 RTF1Q92541 710 aaKnown RBP18.73■□□□□ 0.59
CSDC2-201ENST00000306149 SDSP20132 328 aa18.72■□□□□ 0.59
CSDC2-201ENST00000306149 RAB3GAP1Q15042 981 aa18.72■□□□□ 0.59
CSDC2-201ENST00000306149 CRB1P82279 1406 aa18.72■□□□□ 0.59
CSDC2-201ENST00000306149 PTPRUQ92729 1446 aa18.72■□□□□ 0.59
CSDC2-201ENST00000306149 ISY1Q9ULR0 285 aaKnown RBP18.72■□□□□ 0.59
CSDC2-201ENST00000306149 SSFA2P28290 1259 aa18.71■□□□□ 0.59
CSDC2-201ENST00000306149 HAP1P54257 671 aaPredicted RBP18.71■□□□□ 0.59
CSDC2-201ENST00000306149 UBR1Q8IWV7 1749 aa18.71■□□□□ 0.59
CSDC2-201ENST00000306149 KIAA0232Q92628 1395 aa18.71■□□□□ 0.59
CSDC2-201ENST00000306149 AMPHP49418 695 aa18.71■□□□□ 0.59
CSDC2-201ENST00000306149 EYA1Q99502 592 aa18.71■□□□□ 0.59
CSDC2-201ENST00000306149 RRAGDQ9NQL2 400 aaPredicted RBP18.71■□□□□ 0.59
CSDC2-201ENST00000306149 PTPRCP08575 1304 aa18.71■□□□□ 0.59
CSDC2-201ENST00000306149 RIMS1Q86UR5 1692 aaKnown RBP18.7■□□□□ 0.58
CSDC2-201ENST00000306149 MRE11P49959 708 aa18.7■□□□□ 0.58
CSDC2-201ENST00000306149 USP26Q9BXU7 913 aa18.7■□□□□ 0.58
CSDC2-201ENST00000306149 USP31Q70CQ4 1352 aa18.69■□□□□ 0.58
CSDC2-201ENST00000306149 TSHZ3Q63HK5 1081 aa18.69■□□□□ 0.58
CSDC2-201ENST00000306149 UBE2Q2Q8WVN8 375 aa18.69■□□□□ 0.58
CSDC2-201ENST00000306149 GBP4Q96PP9 640 aa18.69■□□□□ 0.58
CSDC2-201ENST00000306149 AK9Q5TCS8 1911 aa18.68■□□□□ 0.58
CSDC2-201ENST00000306149 PLEKHG1Q9ULL1 1385 aa18.67■□□□□ 0.58
CSDC2-201ENST00000306149 PTMSP20962 102 aa18.67■□□□□ 0.58
CSDC2-201ENST00000306149 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
CSDC2-201ENST00000306149 EXOC6BQ9Y2D4 811 aa18.67■□□□□ 0.58
CSDC2-201ENST00000306149 EID1Q9Y6B2 187 aa18.67■□□□□ 0.58
CSDC2-201ENST00000306149 NLRP6P59044 892 aa18.66■□□□□ 0.58
CSDC2-201ENST00000306149 EIF5BO60841 1220 aaKnown RBP18.66■□□□□ 0.58
CSDC2-201ENST00000306149 SSH2Q76I76 1423 aa18.66■□□□□ 0.58
CSDC2-201ENST00000306149 GAS2L3Q86XJ1 694 aa18.65■□□□□ 0.58
CSDC2-201ENST00000306149 RABEP1Q15276 862 aa18.65■□□□□ 0.58
CSDC2-201ENST00000306149 GRPEL1Q9HAV7 217 aa18.65■□□□□ 0.58
CSDC2-201ENST00000306149 ARHGEF10O15013 1369 aa18.64■□□□□ 0.58
CSDC2-201ENST00000306149 FLT4P35916 1363 aa18.64■□□□□ 0.58
CSDC2-201ENST00000306149 TOPAZ1Q8N9V7 1692 aa18.64■□□□□ 0.57
CSDC2-201ENST00000306149 RGPD1P0DJD0 1748 aa18.64■□□□□ 0.57
CSDC2-201ENST00000306149 CEP170BQ9Y4F5 1589 aaPredicted RBP18.64■□□□□ 0.57
CSDC2-201ENST00000306149 NALCNQ8IZF0 1738 aa18.64■□□□□ 0.57
CSDC2-201ENST00000306149 SKOR2Q2VWA4 1001 aaPredicted RBP18.64■□□□□ 0.57
CSDC2-201ENST00000306149 KIF13AQ9H1H9 1805 aa18.63■□□□□ 0.57
CSDC2-201ENST00000306149 FKBP5Q13451 457 aaPredicted RBP18.63■□□□□ 0.57
CSDC2-201ENST00000306149 PKP1Q13835 747 aa18.63■□□□□ 0.57
CSDC2-201ENST00000306149 STK31Q9BXU1 1019 aa18.63■□□□□ 0.57
CSDC2-201ENST00000306149 SBNO1A3KN83 1393 aa18.63■□□□□ 0.57
CSDC2-201ENST00000306149 TTC21AQ8NDW8 1320 aa18.63■□□□□ 0.57
CSDC2-201ENST00000306149 HMMRO75330 724 aa18.63■□□□□ 0.57
CSDC2-201ENST00000306149 RGPD8O14715 1765 aaPredicted RBP18.62■□□□□ 0.57
CSDC2-201ENST00000306149 CCT4P50991 539 aaKnown RBP18.62■□□□□ 0.57
CSDC2-201ENST00000306149 PDE1AP54750 535 aa18.62■□□□□ 0.57
CSDC2-201ENST00000306149 CASC1Q6TDU7 716 aa18.62■□□□□ 0.57
CSDC2-201ENST00000306149 IGSF1Q8N6C5 1336 aa18.61■□□□□ 0.57
CSDC2-201ENST00000306149 USHBP1Q8N6Y0 703 aa18.61■□□□□ 0.57
CSDC2-201ENST00000306149 PNMA6EA0A0J9YXQ4 647 aa18.61■□□□□ 0.57
CSDC2-201ENST00000306149 GNAI2P04899 355 aa18.61■□□□□ 0.57
CSDC2-201ENST00000306149 FLIIQ13045 1269 aa18.61■□□□□ 0.57
CSDC2-201ENST00000306149 C14orf37Q86TY3 774 aa18.6■□□□□ 0.57
CSDC2-201ENST00000306149 BAG4O95429 457 aaKnown RBP18.6■□□□□ 0.57
CSDC2-201ENST00000306149 CLEC17AQ6ZS10 378 aa18.6■□□□□ 0.57
CSDC2-201ENST00000306149 ZGPATQ8N5A5 531 aaKnown RBP18.6■□□□□ 0.57
CSDC2-201ENST00000306149 KDRP35968 1356 aa18.6■□□□□ 0.57
CSDC2-201ENST00000306149 IL17REQ8NFR9 667 aa18.59■□□□□ 0.57
CSDC2-201ENST00000306149 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
CSDC2-201ENST00000306149 CLCN1P35523 988 aa18.59■□□□□ 0.57
CSDC2-201ENST00000306149 FMN2Q9NZ56 1722 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms