RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 ZNF530Q6P9A1 599 aaPredicted RBP23.33■■□□□ 1.33
CTNND2-201ENST00000304623 OSCARQ8IYS5 282 aa23.33■■□□□ 1.33
CTNND2-201ENST00000304623 TMCO3Q6UWJ1 677 aa23.33■■□□□ 1.33
CTNND2-201ENST00000304623 AFAP1Q8N556 730 aa23.32■■□□□ 1.32
CTNND2-201ENST00000304623 TMEM57Q8N5G2 664 aa23.32■■□□□ 1.32
CTNND2-201ENST00000304623 ZHX3Q9H4I2 956 aa23.32■■□□□ 1.32
CTNND2-201ENST00000304623 CENPHQ9H3R5 247 aa23.32■■□□□ 1.32
CTNND2-201ENST00000304623 ENOX2Q16206 610 aaKnown RBP23.32■■□□□ 1.32
CTNND2-201ENST00000304623 MEX3CQ5U5Q3 659 aaKnown RBP23.32■■□□□ 1.32
CTNND2-201ENST00000304623 CCDC148Q8NFR7 591 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 LRRFIP2Q9Y608 721 aaKnown RBP23.31■■□□□ 1.32
CTNND2-201ENST00000304623 CFAP100Q494V2 611 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 ESCO1Q5FWF5 840 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 CCDC183Q5T5S1 534 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 CASTP20810 708 aaKnown RBP23.31■■□□□ 1.32
CTNND2-201ENST00000304623 CABP4P57796 275 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 PTPN14Q15678 1187 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 CEP131Q9UPN4 1083 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 ZSCAN12O43309 604 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 FAM193AP78312 1265 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 UBAC1Q9BSL1 405 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 IL1RAPL2Q9NP60 686 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 C9orf84Q5VXU9 1444 aa23.31■■□□□ 1.32
CTNND2-201ENST00000304623 SFPQP23246 707 aaKnown RBP eCLIP23.3■■□□□ 1.32
CTNND2-201ENST00000304623 CCDC184Q52MB2 194 aa23.3■■□□□ 1.32
CTNND2-201ENST00000304623 FAM69CQ0P6D2 419 aa23.3■■□□□ 1.32
CTNND2-201ENST00000304623 CEP126Q9P2H0 1117 aa23.3■■□□□ 1.32
CTNND2-201ENST00000304623 FKBP4Q02790 459 aaKnown RBP eCLIP23.3■■□□□ 1.32
CTNND2-201ENST00000304623 TAF4BQ92750 862 aa23.3■■□□□ 1.32
CTNND2-201ENST00000304623 NFE2L2Q16236 605 aa23.3■■□□□ 1.32
CTNND2-201ENST00000304623 KIAA1328Q86T90 577 aa23.3■■□□□ 1.32
CTNND2-201ENST00000304623 EHBP1L1Q8N3D4 1523 aa23.29■■□□□ 1.32
CTNND2-201ENST00000304623 SCAND2PQ9GZW5 306 aaPredicted RBP23.29■■□□□ 1.32
CTNND2-201ENST00000304623 EIF5P55010 431 aaKnown RBP23.29■■□□□ 1.32
CTNND2-201ENST00000304623 TAX1BP1Q86VP1 789 aa23.29■■□□□ 1.32
CTNND2-201ENST00000304623 ATAD2Q6PL18 1390 aa23.29■■□□□ 1.32
CTNND2-201ENST00000304623 PLEKHH1Q9ULM0 1364 aa23.29■■□□□ 1.32
CTNND2-201ENST00000304623 ANO10Q9NW15 660 aa23.29■■□□□ 1.32
CTNND2-201ENST00000304623 SPG7Q9UQ90 795 aa23.29■■□□□ 1.32
CTNND2-201ENST00000304623 STK11IPQ8N1F8 1099 aa23.28■■□□□ 1.32
CTNND2-201ENST00000304623 PLEKHH2Q8IVE3 1493 aa23.27■■□□□ 1.32
CTNND2-201ENST00000304623 ANKRD62A6NC57 917 aa23.27■■□□□ 1.32
CTNND2-201ENST00000304623 RAB11FIP3O75154 756 aa23.27■■□□□ 1.32
CTNND2-201ENST00000304623 TMPOP42166 694 aaKnown RBP23.27■■□□□ 1.32
CTNND2-201ENST00000304623 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
CTNND2-201ENST00000304623 TXNDC2Q86VQ3 553 aa23.27■■□□□ 1.32
CTNND2-201ENST00000304623 MPHOSPH8Q99549 860 aa23.27■■□□□ 1.32
CTNND2-201ENST00000304623 KIF18AQ8NI77 898 aa23.27■■□□□ 1.32
CTNND2-201ENST00000304623 IMMTQ16891 758 aaKnown RBP23.27■■□□□ 1.32
CTNND2-201ENST00000304623 KIF1BPQ96EK5 621 aa23.27■■□□□ 1.32
CTNND2-201ENST00000304623 CRACR2AQ9BSW2 395 aa23.27■■□□□ 1.32
CTNND2-201ENST00000304623 EZRP15311 586 aaKnown RBP23.26■■□□□ 1.31
CTNND2-201ENST00000304623 TDO2P48775 406 aa23.26■■□□□ 1.31
CTNND2-201ENST00000304623 SH2B1Q9NRF2 756 aaPredicted RBP23.26■■□□□ 1.31
CTNND2-201ENST00000304623 GLRX3O76003 335 aaKnown RBP23.26■■□□□ 1.31
CTNND2-201ENST00000304623 ZNF397Q8NF99 534 aaPredicted RBP23.26■■□□□ 1.31
CTNND2-201ENST00000304623 MX1P20591 662 aa23.26■■□□□ 1.31
CTNND2-201ENST00000304623 ATP2B2Q01814 1243 aa23.26■■□□□ 1.31
CTNND2-201ENST00000304623 RTEL1-TNFRSF6BF6WH68 1400 aa23.25■■□□□ 1.31
CTNND2-201ENST00000304623 ERICH4A6NGS2 130 aa23.25■■□□□ 1.31
CTNND2-201ENST00000304623 JAKMIP3Q5VZ66 844 aa23.25■■□□□ 1.31
CTNND2-201ENST00000304623 INCENPQ9NQS7 918 aa23.25■■□□□ 1.31
CTNND2-201ENST00000304623 RPGRIP1LQ68CZ1 1315 aa23.25■■□□□ 1.31
CTNND2-201ENST00000304623 CAMK4Q16566 473 aa23.25■■□□□ 1.31
CTNND2-201ENST00000304623 ALDH1L2Q3SY69 923 aa23.24■■□□□ 1.31
CTNND2-201ENST00000304623 MYL6BP14649 208 aa23.24■■□□□ 1.31
CTNND2-201ENST00000304623 CCDC83Q8IWF9 413 aa23.24■■□□□ 1.31
CTNND2-201ENST00000304623 DDX11Q96FC9 970 aa23.24■■□□□ 1.31
CTNND2-201ENST00000304623 SLC52A1Q9NWF4 448 aa23.24■■□□□ 1.31
CTNND2-201ENST00000304623 POLA1P09884 1462 aaPredicted RBP23.24■■□□□ 1.31
CTNND2-201ENST00000304623 MAP9Q49MG5 647 aa23.23■■□□□ 1.31
CTNND2-201ENST00000304623 KRI1Q8N9T8 703 aaKnown RBP23.23■■□□□ 1.31
CTNND2-201ENST00000304623 U3KPZ7 1027 aaPredicted RBP23.23■■□□□ 1.31
CTNND2-201ENST00000304623 EFCAB5A4FU69 1503 aa23.23■■□□□ 1.31
CTNND2-201ENST00000304623 NUTM1Q86Y26 1132 aa23.23■■□□□ 1.31
CTNND2-201ENST00000304623 SSBP05455 408 aaKnown RBP eCLIP23.22■■□□□ 1.31
CTNND2-201ENST00000304623 MCM3P25205 808 aa23.22■■□□□ 1.31
CTNND2-201ENST00000304623 EXOC6BQ9Y2D4 811 aa23.22■■□□□ 1.31
CTNND2-201ENST00000304623 FERMT3Q86UX7 667 aa23.22■■□□□ 1.31
CTNND2-201ENST00000304623 BTBD11A6QL63 1104 aa23.22■■□□□ 1.31
CTNND2-201ENST00000304623 CTAGE5O15320 804 aa23.22■■□□□ 1.31
CTNND2-201ENST00000304623 SEPT11Q9NVA2 429 aaKnown RBP23.22■■□□□ 1.31
CTNND2-201ENST00000304623 SHTN1A0MZ66 631 aa23.21■■□□□ 1.31
CTNND2-201ENST00000304623 KIF5CO60282 957 aa23.21■■□□□ 1.31
CTNND2-201ENST00000304623 CGNQ9P2M7 1197 aaKnown RBP23.21■■□□□ 1.31
CTNND2-201ENST00000304623 PAF1Q8N7H5 531 aa23.21■■□□□ 1.31
CTNND2-201ENST00000304623 NEMFO60524 1076 aa23.21■■□□□ 1.31
CTNND2-201ENST00000304623 ABCC11Q96J66 1382 aa23.21■■□□□ 1.31
CTNND2-201ENST00000304623 GBP2P32456 591 aaPredicted RBP23.21■■□□□ 1.31
CTNND2-201ENST00000304623 RARSP54136 660 aaKnown RBP23.2■■□□□ 1.3
CTNND2-201ENST00000304623 SPA17Q15506 151 aa23.2■■□□□ 1.3
CTNND2-201ENST00000304623 PRPF40BQ6NWY9 871 aaKnown RBP23.2■■□□□ 1.3
CTNND2-201ENST00000304623 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
CTNND2-201ENST00000304623 CASQ1P31415 396 aa23.19■■□□□ 1.3
CTNND2-201ENST00000304623 NSD3Q9BZ95 1437 aa23.19■■□□□ 1.3
CTNND2-201ENST00000304623 MCM5P33992 734 aa23.19■■□□□ 1.3
CTNND2-201ENST00000304623 CLIP2Q9UDT6 1046 aa23.18■■□□□ 1.3
CTNND2-201ENST00000304623 TOP1P11387 765 aaKnown RBP23.18■■□□□ 1.3
CTNND2-201ENST00000304623 AIDAQ96BJ3 306 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms