RNA–Protein interactions for RNA: ENST00000304330.8

RPAP1-201, Transcript of RNA polymerase II associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAP1, Length 4,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-201ENST00000304330 ASXL2Q76L83 1435 aa13.91□□□□□ -0.18
RPAP1-201ENST00000304330 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
RPAP1-201ENST00000304330 XBP1P17861 261 aa13.91□□□□□ -0.18
RPAP1-201ENST00000304330 NFXL1Q6ZNB6 911 aa13.91□□□□□ -0.18
RPAP1-201ENST00000304330 ZMYM3Q14202 1370 aa13.91□□□□□ -0.18
RPAP1-201ENST00000304330 FIBPO43427 364 aa13.91□□□□□ -0.18
RPAP1-201ENST00000304330 CCDC70Q6NSX1 233 aa13.91□□□□□ -0.18
RPAP1-201ENST00000304330 TBC1D2BQ9UPU7 963 aa13.91□□□□□ -0.18
RPAP1-201ENST00000304330 CCDC9Q9Y3X0 531 aaKnown RBP13.91□□□□□ -0.18
RPAP1-201ENST00000304330 FYB1O15117 783 aa13.9□□□□□ -0.18
RPAP1-201ENST00000304330 EMILIN1Q9Y6C2 1016 aa13.9□□□□□ -0.18
RPAP1-201ENST00000304330 IPO7O95373 1038 aaKnown RBP13.9□□□□□ -0.18
RPAP1-201ENST00000304330 WASHC4Q2M389 1173 aa13.9□□□□□ -0.18
RPAP1-201ENST00000304330 OLFM4Q6UX06 510 aa13.9□□□□□ -0.18
RPAP1-201ENST00000304330 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
RPAP1-201ENST00000304330 PDRG1Q9NUG6 133 aa13.9□□□□□ -0.18
RPAP1-201ENST00000304330 PCDHB15Q9Y5E8 787 aa13.9□□□□□ -0.18
RPAP1-201ENST00000304330 THUMPD2Q9BTF0 503 aaKnown RBP13.9□□□□□ -0.18
RPAP1-201ENST00000304330 TRIM5Q9C035 493 aa13.9□□□□□ -0.18
RPAP1-201ENST00000304330 SART3Q15020 963 aaKnown RBP13.9□□□□□ -0.19
RPAP1-201ENST00000304330 NOL10Q9BSC4 688 aaKnown RBP13.9□□□□□ -0.19
RPAP1-201ENST00000304330 CFAP45Q9UL16 551 aa13.9□□□□□ -0.19
RPAP1-201ENST00000304330 TTC21AQ8NDW8 1320 aa13.89□□□□□ -0.19
RPAP1-201ENST00000304330 TBC1D9Q6ZT07 1266 aa13.89□□□□□ -0.19
RPAP1-201ENST00000304330 HOMER1Q86YM7 354 aa13.89□□□□□ -0.19
RPAP1-201ENST00000304330 LARP1BQ659C4 914 aaKnown RBP13.89□□□□□ -0.19
RPAP1-201ENST00000304330 SMC5Q8IY18 1101 aa13.89□□□□□ -0.19
RPAP1-201ENST00000304330 TNPO1Q92973 898 aaKnown RBP13.89□□□□□ -0.19
RPAP1-201ENST00000304330 TTC22Q5TAA0 569 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 ARID3AQ99856 593 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 CTNNA3Q9UI47 895 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 SBNO2Q9Y2G9 1366 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 BTBD11A6QL63 1104 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 CCDC158Q5M9N0 1113 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 MBIPQ9NS73 344 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 VSIG10Q8N0Z9 540 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 BRMS1Q9HCU9 246 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 SOS1Q07889 1333 aaPredicted RBP13.88□□□□□ -0.19
RPAP1-201ENST00000304330 MCM5P33992 734 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 TEX35Q5T0J7 233 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 ZSCAN25Q6NSZ9 544 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 ZNF592Q92610 1267 aa13.88□□□□□ -0.19
RPAP1-201ENST00000304330 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.88□□□□□ -0.194e-6■■■■■ 36.7
RPAP1-201ENST00000304330 SKAP1Q86WV1 359 aa13.87□□□□□ -0.19
RPAP1-201ENST00000304330 EXOC6BQ9Y2D4 811 aa13.87□□□□□ -0.19
RPAP1-201ENST00000304330 KLHL40Q2TBA0 621 aa13.87□□□□□ -0.19
RPAP1-201ENST00000304330 MCM10Q7L590 875 aa13.87□□□□□ -0.19
RPAP1-201ENST00000304330 AACSQ86V21 672 aa13.87□□□□□ -0.19
RPAP1-201ENST00000304330 KDM2BQ8NHM5 1336 aa13.87□□□□□ -0.19
RPAP1-201ENST00000304330 ANKRD44Q8N8A2 993 aa13.87□□□□□ -0.19
RPAP1-201ENST00000304330 SLC26A8Q96RN1 970 aa13.87□□□□□ -0.19
RPAP1-201ENST00000304330 TNMDQ9H2S6 317 aa13.87□□□□□ -0.19
RPAP1-201ENST00000304330 ANAPC15P60006 121 aa13.86□□□□□ -0.19
RPAP1-201ENST00000304330 LARP1Q6PKG0 1096 aaKnown RBP13.86□□□□□ -0.19
RPAP1-201ENST00000304330 PROSER2Q86WR7 435 aaPredicted RBP13.86□□□□□ -0.19
RPAP1-201ENST00000304330 JAKMIP1Q96N16 626 aaKnown RBP13.86□□□□□ -0.19
RPAP1-201ENST00000304330 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
RPAP1-201ENST00000304330 PIK3R4Q99570 1358 aa13.86□□□□□ -0.19
RPAP1-201ENST00000304330 RRP9O43818 475 aaKnown RBP13.86□□□□□ -0.19
RPAP1-201ENST00000304330 DNAJC2Q99543 621 aaKnown RBP13.86□□□□□ -0.19
RPAP1-201ENST00000304330 KIF6Q6ZMV9 814 aa13.85□□□□□ -0.19
RPAP1-201ENST00000304330 MARCH6O60337 910 aa13.85□□□□□ -0.19
RPAP1-201ENST00000304330 STK38Q15208 465 aa13.85□□□□□ -0.19
RPAP1-201ENST00000304330 MRPL50Q8N5N7 158 aaKnown RBP13.85□□□□□ -0.19
RPAP1-201ENST00000304330 PIP4K2AP48426 406 aaPredicted RBP13.85□□□□□ -0.19
RPAP1-201ENST00000304330 FLIIQ13045 1269 aa13.85□□□□□ -0.19
RPAP1-201ENST00000304330 SCAND2PQ9GZW5 306 aaPredicted RBP13.85□□□□□ -0.19
RPAP1-201ENST00000304330 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
RPAP1-201ENST00000304330 A0A0U1RQG5 324 aaPredicted RBP13.85□□□□□ -0.19
RPAP1-201ENST00000304330 CCDC183Q5T5S1 534 aa13.85□□□□□ -0.19
RPAP1-201ENST00000304330 MNS1Q8NEH6 495 aa13.85□□□□□ -0.19
RPAP1-201ENST00000304330 NUP62CLQ9H1M0 184 aa13.85□□□□□ -0.19
RPAP1-201ENST00000304330 KDM5CP41229 1560 aa13.85□□□□□ -0.19
RPAP1-201ENST00000304330 IL1RAPL2Q9NP60 686 aa13.84□□□□□ -0.19
RPAP1-201ENST00000304330 DNAAF4Q8WXU2 420 aa13.84□□□□□ -0.19
RPAP1-201ENST00000304330 ACBD3Q9H3P7 528 aa13.84□□□□□ -0.19
RPAP1-201ENST00000304330 CDKL5O76039 1030 aa13.84□□□□□ -0.19
RPAP1-201ENST00000304330 DBF4Q9UBU7 674 aaPredicted RBP13.84□□□□□ -0.19
RPAP1-201ENST00000304330 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
RPAP1-201ENST00000304330 VPS37DQ86XT2 251 aa13.84□□□□□ -0.19
RPAP1-201ENST00000304330 CABP4P57796 275 aa13.83□□□□□ -0.2
RPAP1-201ENST00000304330 DCTN1Q14203 1278 aa13.83□□□□□ -0.2
RPAP1-201ENST00000304330 ZBTB40Q9NUA8 1239 aa13.83□□□□□ -0.2
RPAP1-201ENST00000304330 UHRF1BP1LA0JNW5 1464 aa13.83□□□□□ -0.2
RPAP1-201ENST00000304330 CWC27Q6UX04 472 aaKnown RBP13.83□□□□□ -0.2
RPAP1-201ENST00000304330 SPATA32Q96LK8 384 aa13.83□□□□□ -0.2
RPAP1-201ENST00000304330 HYPKQ9NX55 129 aa13.83□□□□□ -0.2
RPAP1-201ENST00000304330 MBD5Q9P267 1494 aa13.83□□□□□ -0.2
RPAP1-201ENST00000304330 HMGB1P09429 215 aaKnown RBP13.83□□□□□ -0.2
RPAP1-201ENST00000304330 ABCA8O94911 1581 aa13.83□□□□□ -0.2
RPAP1-201ENST00000304330 KDM5DQ9BY66 1539 aa13.82□□□□□ -0.2
RPAP1-201ENST00000304330 BAG4O95429 457 aaKnown RBP13.82□□□□□ -0.2
RPAP1-201ENST00000304330 FBXO31Q5XUX0 539 aaPredicted RBP13.82□□□□□ -0.2
RPAP1-201ENST00000304330 DACH1Q9UI36 760 aa13.82□□□□□ -0.2
RPAP1-201ENST00000304330 PLXNC1O60486 1568 aa13.82□□□□□ -0.2
RPAP1-201ENST00000304330 SSFA2P28290 1259 aa13.82□□□□□ -0.2
RPAP1-201ENST00000304330 CREBRFQ8IUR6 639 aa13.82□□□□□ -0.2
RPAP1-201ENST00000304330 MAP3K11Q16584 847 aa13.82□□□□□ -0.2
RPAP1-201ENST00000304330 UVSSAQ2YD98 709 aa13.82□□□□□ -0.2
RPAP1-201ENST00000304330 TTC39AQ5SRH9 613 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms