RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 TBC1D2Q9BYX2 928 aa23.43■■□□□ 1.34
RNF139-201ENST00000303545 PIK3C2AO00443 1686 aa23.43■■□□□ 1.34
RNF139-201ENST00000303545 RGPD1P0DJD0 1748 aa23.43■■□□□ 1.34
RNF139-201ENST00000303545 SBNO1A3KN83 1393 aa23.42■■□□□ 1.34
RNF139-201ENST00000303545 CEP170BQ9Y4F5 1589 aaPredicted RBP23.42■■□□□ 1.34
RNF139-201ENST00000303545 ZBTB7CA1YPR0 619 aa23.42■■□□□ 1.34
RNF139-201ENST00000303545 TSPYL4Q9UJ04 414 aa23.42■■□□□ 1.34
RNF139-201ENST00000303545 USHBP1Q8N6Y0 703 aa23.41■■□□□ 1.34
RNF139-201ENST00000303545 FMN2Q9NZ56 1722 aa23.41■■□□□ 1.34
RNF139-201ENST00000303545 SLC4A2P04920 1241 aa23.4■■□□□ 1.34
RNF139-201ENST00000303545 NECTIN2Q92692 538 aa23.4■■□□□ 1.34
RNF139-201ENST00000303545 CRB1P82279 1406 aa23.4■■□□□ 1.34
RNF139-201ENST00000303545 ARHGEF10O15013 1369 aa23.4■■□□□ 1.34
RNF139-201ENST00000303545 APBB1O00213 710 aa23.39■■□□□ 1.34
RNF139-201ENST00000303545 G2E3Q7L622 706 aa23.38■■□□□ 1.33
RNF139-201ENST00000303545 GCC1Q96CN9 775 aa23.38■■□□□ 1.33
RNF139-201ENST00000303545 CHMP4BQ9H444 224 aaKnown RBP23.38■■□□□ 1.33
RNF139-201ENST00000303545 HOXC9P31274 260 aa23.38■■□□□ 1.33
RNF139-201ENST00000303545 XRN1Q8IZH2 1706 aaKnown RBP23.37■■□□□ 1.33
RNF139-201ENST00000303545 F6X3S4 739 aa23.37■■□□□ 1.33
RNF139-201ENST00000303545 SLC4A10Q6U841 1118 aa23.37■■□□□ 1.33
RNF139-201ENST00000303545 SETD1BQ9UPS6 1966 aaKnown RBP23.36■■□□□ 1.33
RNF139-201ENST00000303545 IGSF1Q8N6C5 1336 aa23.36■■□□□ 1.33
RNF139-201ENST00000303545 RGS12O14924 1447 aa23.35■■□□□ 1.33
RNF139-201ENST00000303545 MSH6P52701 1360 aa23.35■■□□□ 1.33
RNF139-201ENST00000303545 C16orf71Q8IYS4 520 aaPredicted RBP23.35■■□□□ 1.33
RNF139-201ENST00000303545 MEIS3Q99687 375 aa23.35■■□□□ 1.33
RNF139-201ENST00000303545 INTS3Q68E01 1043 aaKnown RBP23.34■■□□□ 1.33
RNF139-201ENST00000303545 PHF8Q9UPP1 1060 aa23.32■■□□□ 1.32
RNF139-201ENST00000303545 KIAA0232Q92628 1395 aa23.32■■□□□ 1.32
RNF139-201ENST00000303545 XPCQ01831 940 aaPredicted RBP23.32■■□□□ 1.32
RNF139-201ENST00000303545 ANKLE2Q86XL3 938 aa23.32■■□□□ 1.32
RNF139-201ENST00000303545 KDRP35968 1356 aa23.32■■□□□ 1.32
RNF139-201ENST00000303545 ESCO1Q5FWF5 840 aa23.31■■□□□ 1.32
RNF139-201ENST00000303545 GAS2L2Q8NHY3 880 aa23.31■■□□□ 1.32
RNF139-201ENST00000303545 SMARCA5O60264 1052 aaPredicted RBP23.31■■□□□ 1.32
RNF139-201ENST00000303545 BMP2KLQ5H9B9 411 aa23.3■■□□□ 1.32
RNF139-201ENST00000303545 OTUD7AQ8TE49 926 aaPredicted RBP23.3■■□□□ 1.32
RNF139-201ENST00000303545 ANTXR1Q9H6X2 564 aa23.29■■□□□ 1.32
RNF139-201ENST00000303545 GNAT3A8MTJ3 354 aa23.29■■□□□ 1.32
RNF139-201ENST00000303545 HAP1P54257 671 aaPredicted RBP23.29■■□□□ 1.32
RNF139-201ENST00000303545 ANKARQ7Z5J8 1434 aa23.29■■□□□ 1.32
RNF139-201ENST00000303545 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
RNF139-201ENST00000303545 GSE1Q14687 1217 aa23.28■■□□□ 1.32
RNF139-201ENST00000303545 CEP85Q6P2H3 762 aa23.28■■□□□ 1.32
RNF139-201ENST00000303545 TBC1D9Q6ZT07 1266 aa23.28■■□□□ 1.32
RNF139-201ENST00000303545 IL17REQ8NFR9 667 aa23.28■■□□□ 1.32
RNF139-201ENST00000303545 DCTPP1Q9H773 170 aa23.27■■□□□ 1.32
RNF139-201ENST00000303545 PTPRCP08575 1304 aa23.27■■□□□ 1.32
RNF139-201ENST00000303545 PSME1Q06323 249 aa23.27■■□□□ 1.32
RNF139-201ENST00000303545 ANKRD44Q8N8A2 993 aa23.27■■□□□ 1.32
RNF139-201ENST00000303545 GSPT1P15170 499 aaKnown RBP23.26■■□□□ 1.31
RNF139-201ENST00000303545 ATP10DQ9P241 1426 aa23.26■■□□□ 1.31
RNF139-201ENST00000303545 RTL1A6NKG5 1358 aa23.26■■□□□ 1.31
RNF139-201ENST00000303545 PLEKHM2Q8IWE5 1019 aa23.26■■□□□ 1.31
RNF139-201ENST00000303545 LMOD2Q6P5Q4 547 aa23.25■■□□□ 1.31
RNF139-201ENST00000303545 STK31Q9BXU1 1019 aa23.23■■□□□ 1.31
RNF139-201ENST00000303545 KIF24Q5T7B8 1368 aa23.23■■□□□ 1.31
RNF139-201ENST00000303545 NWD1Q149M9 1564 aa23.23■■□□□ 1.31
RNF139-201ENST00000303545 FKBP5Q13451 457 aaPredicted RBP23.22■■□□□ 1.31
RNF139-201ENST00000303545 NBPF6Q5VWK0 638 aa23.22■■□□□ 1.31
RNF139-201ENST00000303545 LRRC59Q96AG4 307 aaKnown RBP23.22■■□□□ 1.31
RNF139-201ENST00000303545 NBPF4Q96M43 638 aa23.22■■□□□ 1.31
RNF139-201ENST00000303545 ORAI2Q96SN7 254 aa23.22■■□□□ 1.31
RNF139-201ENST00000303545 HSCBQ8IWL3 235 aa23.21■■□□□ 1.31
RNF139-201ENST00000303545 CHD2O14647 1828 aaKnown RBP23.21■■□□□ 1.31
RNF139-201ENST00000303545 RPAP2Q8IXW5 612 aaPredicted RBP23.21■■□□□ 1.31
RNF139-201ENST00000303545 RBM42Q9BTD8 480 aaKnown RBP23.21■■□□□ 1.31
RNF139-201ENST00000303545 MAP3K5Q99683 1374 aa23.2■■□□□ 1.31
RNF139-201ENST00000303545 RBM25P49756 843 aaKnown RBP23.2■■□□□ 1.3
RNF139-201ENST00000303545 LTN1O94822 1766 aa23.19■■□□□ 1.3
RNF139-201ENST00000303545 FLIIQ13045 1269 aa23.19■■□□□ 1.3
RNF139-201ENST00000303545 LGR6Q9HBX8 967 aa23.19■■□□□ 1.3
RNF139-201ENST00000303545 FOXD4L1Q9NU39 408 aa23.18■■□□□ 1.3
RNF139-201ENST00000303545 TAF7Q15545 349 aaPredicted RBP23.17■■□□□ 1.3
RNF139-201ENST00000303545 CDC45O75419 566 aa23.17■■□□□ 1.3
RNF139-201ENST00000303545 CD2BP2O95400 341 aaKnown RBP23.17■■□□□ 1.3
RNF139-201ENST00000303545 TTC22Q5TAA0 569 aa23.17■■□□□ 1.3
RNF139-201ENST00000303545 CCDC30Q5VVM6 783 aa23.17■■□□□ 1.3
RNF139-201ENST00000303545 IP6K1Q92551 441 aa23.17■■□□□ 1.3
RNF139-201ENST00000303545 KIF2CQ99661 725 aa23.17■■□□□ 1.3
RNF139-201ENST00000303545 EIF2S2P20042 333 aaKnown RBP23.16■■□□□ 1.3
RNF139-201ENST00000303545 EXOC6BQ9Y2D4 811 aa23.16■■□□□ 1.3
RNF139-201ENST00000303545 HTATSF1O43719 755 aaKnown RBP23.16■■□□□ 1.3
RNF139-201ENST00000303545 CCT4P50991 539 aaKnown RBP23.15■■□□□ 1.3
RNF139-201ENST00000303545 TSHZ3Q63HK5 1081 aa23.15■■□□□ 1.3
RNF139-201ENST00000303545 PHAXQ9H814 394 aaKnown RBP23.15■■□□□ 1.3
RNF139-201ENST00000303545 RGPD2P0DJD1 1756 aa23.14■■□□□ 1.29
RNF139-201ENST00000303545 KCNQ3O43525 872 aa23.13■■□□□ 1.29
RNF139-201ENST00000303545 HDGFL1Q5TGJ6 251 aa23.12■■□□□ 1.29
RNF139-201ENST00000303545 IL27Q8NEV9 243 aa23.12■■□□□ 1.29
RNF139-201ENST00000303545 MPRIPQ6WCQ1 1025 aa23.12■■□□□ 1.29
RNF139-201ENST00000303545 GNAI2P04899 355 aa23.12■■□□□ 1.29
RNF139-201ENST00000303545 HSP90AB1P08238 724 aaKnown RBP23.12■■□□□ 1.29
RNF139-201ENST00000303545 SDSP20132 328 aa23.12■■□□□ 1.29
RNF139-201ENST00000303545 LRRC37A3O60309 1634 aa23.11■■□□□ 1.29
RNF139-201ENST00000303545 ADGRL3Q9HAR2 1447 aa23.11■■□□□ 1.29
RNF139-201ENST00000303545 PNMA6EA0A0J9YXQ4 647 aa23.11■■□□□ 1.29
RNF139-201ENST00000303545 ANXA1P04083 346 aa23.11■■□□□ 1.29
RNF139-201ENST00000303545 HMMRO75330 724 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms