RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 CFAP44Q96MT7 982 aa28.3■■■□□ 2.12
NHLH1-201ENST00000302101 RGPD2P0DJD1 1756 aa28.3■■■□□ 2.12
NHLH1-201ENST00000302101 MBIPQ9NS73 344 aa28.29■■■□□ 2.12
NHLH1-201ENST00000302101 SPATA31A3Q5VYP0 1347 aa28.29■■■□□ 2.12
NHLH1-201ENST00000302101 CENPQQ7L2Z9 268 aaPredicted RBP28.28■■■□□ 2.12
NHLH1-201ENST00000302101 CABLES1Q8TDN4 633 aa28.28■■■□□ 2.12
NHLH1-201ENST00000302101 GAS2L2Q8NHY3 880 aa28.27■■■□□ 2.12
NHLH1-201ENST00000302101 AXIN2Q9Y2T1 843 aa28.27■■■□□ 2.12
NHLH1-201ENST00000302101 LRRC59Q96AG4 307 aaKnown RBP28.27■■■□□ 2.12
NHLH1-201ENST00000302101 RGPD5Q99666 1765 aa28.26■■■□□ 2.11
NHLH1-201ENST00000302101 PDE3AQ14432 1141 aa28.25■■■□□ 2.11
NHLH1-201ENST00000302101 SMC4Q9NTJ3 1288 aa28.25■■■□□ 2.11
NHLH1-201ENST00000302101 ANKRD24Q8TF21 1146 aa28.24■■■□□ 2.11
NHLH1-201ENST00000302101 SSH1Q8WYL5 1049 aa28.24■■■□□ 2.11
NHLH1-201ENST00000302101 RTF1Q92541 710 aaKnown RBP28.24■■■□□ 2.11
NHLH1-201ENST00000302101 PANK1Q8TE04 598 aa28.22■■■□□ 2.11
NHLH1-201ENST00000302101 SOS2Q07890 1332 aaPredicted RBP28.21■■■□□ 2.11
NHLH1-201ENST00000302101 TSPYL6Q8N831 410 aa28.2■■■□□ 2.1
NHLH1-201ENST00000302101 ELL2O00472 640 aaPredicted RBP28.19■■■□□ 2.1
NHLH1-201ENST00000302101 CRYBG1Q9Y4K1 1723 aa28.19■■■□□ 2.1
NHLH1-201ENST00000302101 GNAT3A8MTJ3 354 aa28.19■■■□□ 2.1
NHLH1-201ENST00000302101 TNNQ9UQP3 1299 aa28.19■■■□□ 2.1
NHLH1-201ENST00000302101 VAMP4O75379 141 aa28.18■■■□□ 2.1
NHLH1-201ENST00000302101 DDRGK1Q96HY6 314 aa28.18■■■□□ 2.1
NHLH1-201ENST00000302101 CRB1P82279 1406 aa28.18■■■□□ 2.1
NHLH1-201ENST00000302101 CHL1O00533 1208 aa28.18■■■□□ 2.1
NHLH1-201ENST00000302101 COG6Q9Y2V7 657 aa28.18■■■□□ 2.1
NHLH1-201ENST00000302101 ZKSCAN2Q63HK3 967 aa28.17■■■□□ 2.1
NHLH1-201ENST00000302101 C8orf58Q8NAV2 365 aa28.17■■■□□ 2.1
NHLH1-201ENST00000302101 HTATSF1O43719 755 aaKnown RBP28.16■■■□□ 2.1
NHLH1-201ENST00000302101 ALDH1L2Q3SY69 923 aa28.16■■■□□ 2.1
NHLH1-201ENST00000302101 CLUAP1Q96AJ1 413 aa28.16■■■□□ 2.1
NHLH1-201ENST00000302101 ZNF428Q96B54 188 aa28.16■■■□□ 2.1
NHLH1-201ENST00000302101 TWISTNBQ3B726 338 aaPredicted RBP28.16■■■□□ 2.1
NHLH1-201ENST00000302101 ERBB3P21860 1342 aa28.16■■■□□ 2.1
NHLH1-201ENST00000302101 RLBP1P12271 317 aa28.15■■■□□ 2.1
NHLH1-201ENST00000302101 COL18A1P39060 1754 aa28.14■■■□□ 2.1
NHLH1-201ENST00000302101 MAP3K5Q99683 1374 aa28.14■■■□□ 2.1
NHLH1-201ENST00000302101 CHRNA2Q15822 529 aa28.14■■■□□ 2.1
NHLH1-201ENST00000302101 NOB1Q9ULX3 412 aaKnown RBP28.13■■■□□ 2.09
NHLH1-201ENST00000302101 MIS18AQ9NYP9 233 aa28.13■■■□□ 2.09
NHLH1-201ENST00000302101 RGS3P49796 1198 aa28.12■■■□□ 2.09
NHLH1-201ENST00000302101 NCAPD2Q15021 1401 aa28.12■■■□□ 2.09
NHLH1-201ENST00000302101 KIAA0232Q92628 1395 aa28.12■■■□□ 2.09
NHLH1-201ENST00000302101 FAM161AQ3B820 660 aa28.12■■■□□ 2.09
NHLH1-201ENST00000302101 CAMTA1Q9Y6Y1 1673 aa28.11■■■□□ 2.09
NHLH1-201ENST00000302101 NHSL1Q5SYE7 1610 aa28.11■■■□□ 2.09
NHLH1-201ENST00000302101 IL17REQ8NFR9 667 aa28.1■■■□□ 2.09
NHLH1-201ENST00000302101 KIF16BQ96L93 1317 aa28.1■■■□□ 2.09
NHLH1-201ENST00000302101 TRIM27P14373 513 aa28.1■■■□□ 2.09
NHLH1-201ENST00000302101 C8orf34Q49A92 452 aa28.1■■■□□ 2.09
NHLH1-201ENST00000302101 FTSJ3Q8IY81 847 aaKnown RBP28.1■■■□□ 2.09
NHLH1-201ENST00000302101 DZIP1LQ8IYY4 767 aaKnown RBP28.09■■■□□ 2.09
NHLH1-201ENST00000302101 CPDO75976 1380 aa28.09■■■□□ 2.09
NHLH1-201ENST00000302101 KRT24Q2M2I5 525 aa28.09■■■□□ 2.09
NHLH1-201ENST00000302101 ATF7IPQ6VMQ6 1270 aa28.09■■■□□ 2.09
NHLH1-201ENST00000302101 USP35Q9P2H5 1018 aa28.08■■■□□ 2.09
NHLH1-201ENST00000302101 TSPYL4Q9UJ04 414 aa28.08■■■□□ 2.09
NHLH1-201ENST00000302101 LRRC37A3O60309 1634 aa28.08■■■□□ 2.09
NHLH1-201ENST00000302101 PLEKHO1Q53GL0 409 aaPredicted RBP28.08■■■□□ 2.09
NHLH1-201ENST00000302101 NLRP2Q9NX02 1062 aa28.08■■■□□ 2.09
NHLH1-201ENST00000302101 IPO8O15397 1037 aaKnown RBP28.06■■■□□ 2.08
NHLH1-201ENST00000302101 HAP1P54257 671 aaPredicted RBP28.06■■■□□ 2.08
NHLH1-201ENST00000302101 BRPF1P55201 1214 aaPredicted RBP28.06■■■□□ 2.08
NHLH1-201ENST00000302101 CSB-PGBD3P0DP91 1061 aa28.06■■■□□ 2.08
NHLH1-201ENST00000302101 AMOTQ4VCS5 1084 aa28.06■■■□□ 2.08
NHLH1-201ENST00000302101 SLC4A3P48751 1232 aa28.06■■■□□ 2.08
NHLH1-201ENST00000302101 ZNF530Q6P9A1 599 aaPredicted RBP28.06■■■□□ 2.08
NHLH1-201ENST00000302101 MRPL50Q8N5N7 158 aaKnown RBP28.06■■■□□ 2.08
NHLH1-201ENST00000302101 LMO7Q8WWI1 1683 aa28.05■■■□□ 2.08
NHLH1-201ENST00000302101 LTBP4Q8N2S1 1624 aa28.05■■■□□ 2.08
NHLH1-201ENST00000302101 ABCC6O95255 1503 aa28.05■■■□□ 2.08
NHLH1-201ENST00000302101 MVPQ14764 893 aaKnown RBP28.04■■■□□ 2.08
NHLH1-201ENST00000302101 PRDM11Q9NQV5 511 aa28.03■■■□□ 2.08
NHLH1-201ENST00000302101 AKAP4Q5JQC9 854 aa28.03■■■□□ 2.08
NHLH1-201ENST00000302101 DAXXQ9UER7 740 aaPredicted RBP28.03■■■□□ 2.08
NHLH1-201ENST00000302101 TAF7Q15545 349 aaPredicted RBP28.01■■■□□ 2.07
NHLH1-201ENST00000302101 LGR6Q9HBX8 967 aa28.01■■■□□ 2.07
NHLH1-201ENST00000302101 ABCA3Q99758 1704 aa28.01■■■□□ 2.07
NHLH1-201ENST00000302101 ROBO1Q9Y6N7 1651 aa28■■■□□ 2.07
NHLH1-201ENST00000302101 RAPGEF4Q8WZA2 1011 aa28■■■□□ 2.07
NHLH1-201ENST00000302101 FAM208AQ9UK61 1670 aaKnown RBP28■■■□□ 2.07
NHLH1-201ENST00000302101 CEMIPQ8WUJ3 1361 aa28■■■□□ 2.07
NHLH1-201ENST00000302101 C1orf141Q5JVX7 400 aa28■■■□□ 2.07
NHLH1-201ENST00000302101 MPRIPQ6WCQ1 1025 aa27.98■■■□□ 2.07
NHLH1-201ENST00000302101 AAMPQ13685 434 aa27.98■■■□□ 2.07
NHLH1-201ENST00000302101 ITPRIPQ8IWB1 547 aa27.98■■■□□ 2.07
NHLH1-201ENST00000302101 VIRMAQ69YN4 1812 aaKnown RBP27.97■■■□□ 2.07
NHLH1-201ENST00000302101 IGHDP01880 384 aa27.97■■■□□ 2.07
NHLH1-201ENST00000302101 TMEM57Q8N5G2 664 aa27.97■■■□□ 2.07
NHLH1-201ENST00000302101 ARHGAP45Q92619 1136 aa27.97■■■□□ 2.07
NHLH1-201ENST00000302101 BABAM1Q9NWV8 329 aa27.96■■■□□ 2.07
NHLH1-201ENST00000302101 TATP17735 454 aaPredicted RBP27.95■■■□□ 2.06
NHLH1-201ENST00000302101 DDX19BQ9UMR2 479 aa27.94■■■□□ 2.06
NHLH1-201ENST00000302101 TEFQ10587 303 aa27.93■■■□□ 2.06
NHLH1-201ENST00000302101 MEGF6O75095 1541 aa27.92■■■□□ 2.06
NHLH1-201ENST00000302101 RNMTO43148 476 aaKnown RBP27.92■■■□□ 2.06
NHLH1-201ENST00000302101 PCDHB15Q9Y5E8 787 aa27.91■■■□□ 2.06
NHLH1-201ENST00000302101 ANO8Q9HCE9 1232 aaPredicted RBP27.91■■■□□ 2.06
NHLH1-201ENST00000302101 WDR17Q8IZU2 1322 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms