RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 CCDC192P0DO97 292 aa24.69■■□□□ 1.54
LTBP3-201ENST00000301873 TNMDQ9H2S6 317 aa24.69■■□□□ 1.54
LTBP3-201ENST00000301873 FAM83GA6ND36 823 aa24.69■■□□□ 1.54
LTBP3-201ENST00000301873 NAP1L1P55209 391 aaKnown RBP24.69■■□□□ 1.54
LTBP3-201ENST00000301873 BICRAQ9NZM4 1560 aa24.69■■□□□ 1.54
LTBP3-201ENST00000301873 AEBP1Q8IUX7 1158 aa24.68■■□□□ 1.54
LTBP3-201ENST00000301873 BRPF1P55201 1214 aaPredicted RBP24.68■■□□□ 1.54
LTBP3-201ENST00000301873 DDX11Q96FC9 970 aa24.68■■□□□ 1.54
LTBP3-201ENST00000301873 ABCC11Q96J66 1382 aa24.68■■□□□ 1.54
LTBP3-201ENST00000301873 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.68■■□□□ 1.541e-6■■■■■ 34.2
LTBP3-201ENST00000301873 BOLA2Q9H3K6 86 aa24.68■■□□□ 1.54
LTBP3-201ENST00000301873 C14orf93Q9H972 538 aaKnown RBP24.67■■□□□ 1.54
LTBP3-201ENST00000301873 CASTP20810 708 aaKnown RBP24.67■■□□□ 1.54
LTBP3-201ENST00000301873 GRIN2AQ12879 1464 aa24.67■■□□□ 1.54
LTBP3-201ENST00000301873 MPRIPQ6WCQ1 1025 aa24.66■■□□□ 1.54
LTBP3-201ENST00000301873 AMOTL2Q9Y2J4 779 aa24.66■■□□□ 1.54
LTBP3-201ENST00000301873 GLRX3O76003 335 aaKnown RBP24.66■■□□□ 1.54
LTBP3-201ENST00000301873 IKQ13123 557 aaPredicted RBP24.66■■□□□ 1.54
LTBP3-201ENST00000301873 ESPNB1AK53 854 aa24.65■■□□□ 1.54
LTBP3-201ENST00000301873 OFD1O75665 1012 aa24.65■■□□□ 1.54
LTBP3-201ENST00000301873 NOS1P29475 1434 aa24.65■■□□□ 1.54
LTBP3-201ENST00000301873 CCDC43Q96MW1 224 aaKnown RBP24.64■■□□□ 1.54
LTBP3-201ENST00000301873 SPINK5Q9NQ38 1064 aaPredicted RBP24.64■■□□□ 1.54
LTBP3-201ENST00000301873 LRRFIP2Q9Y608 721 aaKnown RBP24.64■■□□□ 1.54
LTBP3-201ENST00000301873 ADGRL1O94910 1474 aa24.64■■□□□ 1.54
LTBP3-201ENST00000301873 ZNF608Q9ULD9 1512 aaPredicted RBP24.64■■□□□ 1.53
LTBP3-201ENST00000301873 KCNH5Q8NCM2 988 aa24.64■■□□□ 1.53
LTBP3-201ENST00000301873 NUP133Q8WUM0 1156 aa24.64■■□□□ 1.53
LTBP3-201ENST00000301873 SPATA32Q96LK8 384 aa24.64■■□□□ 1.53
LTBP3-201ENST00000301873 NUTM2BA6NNL0 878 aaPredicted RBP24.64■■□□□ 1.53
LTBP3-201ENST00000301873 NUTM2EB1AL46 878 aaPredicted RBP24.64■■□□□ 1.53
LTBP3-201ENST00000301873 NUTM2AQ8IVF1 878 aaPredicted RBP24.64■■□□□ 1.53
LTBP3-201ENST00000301873 RBM10P98175 930 aaKnown RBP24.63■■□□□ 1.53
LTBP3-201ENST00000301873 JMYQ8N9B5 988 aa24.63■■□□□ 1.53
LTBP3-201ENST00000301873 IDH1O75874 414 aaKnown RBP24.63■■□□□ 1.53
LTBP3-201ENST00000301873 PRPF40BQ6NWY9 871 aaKnown RBP24.63■■□□□ 1.53
LTBP3-201ENST00000301873 SYCE3A1L190 88 aa24.62■■□□□ 1.53
LTBP3-201ENST00000301873 CCDC83Q8IWF9 413 aa24.62■■□□□ 1.53
LTBP3-201ENST00000301873 TRIM22Q8IYM9 498 aa24.62■■□□□ 1.53
LTBP3-201ENST00000301873 NACAP1Q9BZK3 213 aa24.62■■□□□ 1.53
LTBP3-201ENST00000301873 CCDC8Q9H0W5 538 aaPredicted RBP24.62■■□□□ 1.53
LTBP3-201ENST00000301873 ZSCAN31Q96LW9 406 aaPredicted RBP24.62■■□□□ 1.53
LTBP3-201ENST00000301873 ARGLU1Q9NWB6 273 aaPredicted RBP24.61■■□□□ 1.53
LTBP3-201ENST00000301873 LARP6Q9BRS8 491 aaKnown RBP24.61■■□□□ 1.53
LTBP3-201ENST00000301873 PCDHB15Q9Y5E8 787 aa24.61■■□□□ 1.53
LTBP3-201ENST00000301873 SCAF11Q99590 1463 aaKnown RBP24.61■■□□□ 1.53
LTBP3-201ENST00000301873 FLIIQ13045 1269 aa24.6■■□□□ 1.53
LTBP3-201ENST00000301873 GNL3LQ9NVN8 582 aaKnown RBP24.6■■□□□ 1.53
LTBP3-201ENST00000301873 KLHL34Q8N239 644 aa24.6■■□□□ 1.53
LTBP3-201ENST00000301873 PHF8Q9UPP1 1060 aa24.6■■□□□ 1.53
LTBP3-201ENST00000301873 FILIP1Q7Z7B0 1213 aa24.6■■□□□ 1.53
LTBP3-201ENST00000301873 SERPINC1P01008 464 aa24.59■■□□□ 1.53
LTBP3-201ENST00000301873 PPP6R1Q9UPN7 881 aa24.59■■□□□ 1.53
LTBP3-201ENST00000301873 LARP1Q6PKG0 1096 aaKnown RBP24.59■■□□□ 1.53
LTBP3-201ENST00000301873 URB2Q14146 1524 aaKnown RBP24.58■■□□□ 1.53
LTBP3-201ENST00000301873 SSFA2P28290 1259 aa24.58■■□□□ 1.53
LTBP3-201ENST00000301873 KRT32Q14532 448 aa24.58■■□□□ 1.53
LTBP3-201ENST00000301873 MBIPQ9NS73 344 aa24.58■■□□□ 1.53
LTBP3-201ENST00000301873 TSHZ3Q63HK5 1081 aa24.58■■□□□ 1.53
LTBP3-201ENST00000301873 DNAAF4Q8WXU2 420 aa24.58■■□□□ 1.53
LTBP3-201ENST00000301873 ATP2B2Q01814 1243 aa24.58■■□□□ 1.52
LTBP3-201ENST00000301873 ANXA1P04083 346 aa24.57■■□□□ 1.52
LTBP3-201ENST00000301873 GPATCH8Q9UKJ3 1502 aaKnown RBP24.57■■□□□ 1.52
LTBP3-201ENST00000301873 HMGN5P82970 282 aaKnown RBP24.57■■□□□ 1.52
LTBP3-201ENST00000301873 TEX35Q5T0J7 233 aa24.57■■□□□ 1.52
LTBP3-201ENST00000301873 MYD88Q99836 296 aa24.57■■□□□ 1.52
LTBP3-201ENST00000301873 NUP62CLQ9H1M0 184 aa24.57■■□□□ 1.52
LTBP3-201ENST00000301873 ABCF2Q9UG63 623 aa24.57■■□□□ 1.52
LTBP3-201ENST00000301873 CTNNA3Q9UI47 895 aa24.57■■□□□ 1.52
LTBP3-201ENST00000301873 SLC3A2P08195 630 aaKnown RBP24.57■■□□□ 1.52
LTBP3-201ENST00000301873 TBC1D9Q6ZT07 1266 aa24.56■■□□□ 1.52
LTBP3-201ENST00000301873 CFAP45Q9UL16 551 aa24.56■■□□□ 1.52
LTBP3-201ENST00000301873 CCDC69A6NI79 296 aa24.55■■□□□ 1.52
LTBP3-201ENST00000301873 TDO2P48775 406 aa24.55■■□□□ 1.52
LTBP3-201ENST00000301873 FILIP1LQ4L180 1135 aa24.55■■□□□ 1.52
LTBP3-201ENST00000301873 RAB11FIP3O75154 756 aa24.55■■□□□ 1.52
LTBP3-201ENST00000301873 TXLNAP40222 546 aa24.55■■□□□ 1.52
LTBP3-201ENST00000301873 HSP90AB2PQ58FF8 381 aa24.55■■□□□ 1.52
LTBP3-201ENST00000301873 PRM3Q9NNZ6 103 aa24.54■■□□□ 1.52
LTBP3-201ENST00000301873 LRP2BPQ9P2M1 347 aa24.54■■□□□ 1.52
LTBP3-201ENST00000301873 MAPKBP1O60336 1514 aa24.54■■□□□ 1.52
LTBP3-201ENST00000301873 TNPO1Q92973 898 aaKnown RBP24.54■■□□□ 1.52
LTBP3-201ENST00000301873 HSP90B2PQ58FF3 399 aa24.53■■□□□ 1.52
LTBP3-201ENST00000301873 BICDL1Q6ZP65 573 aa24.53■■□□□ 1.52
LTBP3-201ENST00000301873 DBF4Q9UBU7 674 aaPredicted RBP24.53■■□□□ 1.52
LTBP3-201ENST00000301873 EPS15P42566 896 aa24.53■■□□□ 1.52
LTBP3-201ENST00000301873 CAMK4Q16566 473 aa24.53■■□□□ 1.52
LTBP3-201ENST00000301873 BMP2KLQ5H9B9 411 aa24.53■■□□□ 1.52
LTBP3-201ENST00000301873 METTL24Q5JXM2 366 aa24.53■■□□□ 1.52
LTBP3-201ENST00000301873 ZSCAN25Q6NSZ9 544 aa24.53■■□□□ 1.52
LTBP3-201ENST00000301873 GDPD2Q9HCC8 539 aa24.53■■□□□ 1.52
LTBP3-201ENST00000301873 THOC2Q8NI27 1593 aaKnown RBP24.53■■□□□ 1.52
LTBP3-201ENST00000301873 FAM177A1Q8N128 213 aaPredicted RBP24.53■■□□□ 1.52
LTBP3-201ENST00000301873 PIBF1Q8WXW3 757 aa24.52■■□□□ 1.52
LTBP3-201ENST00000301873 LAMC3Q9Y6N6 1575 aa24.52■■□□□ 1.52
LTBP3-201ENST00000301873 PI4KAP2A4QPH2 592 aa24.52■■□□□ 1.52
LTBP3-201ENST00000301873 PI4KAP1Q8N8J0 262 aa24.52■■□□□ 1.52
LTBP3-201ENST00000301873 RAI14Q9P0K7 980 aa24.52■■□□□ 1.52
LTBP3-201ENST00000301873 CUL7Q14999 1698 aa24.51■■□□□ 1.51
LTBP3-201ENST00000301873 UBAC1Q9BSL1 405 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms