RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 NINLQ9Y2I6 1382 aa17.46■□□□□ 0.39
CDT1-201ENST00000301019 PTGS1P23219 599 aa17.46■□□□□ 0.39
CDT1-201ENST00000301019 USP48Q86UV5 1035 aa17.46■□□□□ 0.39
CDT1-201ENST00000301019 PTPRTO14522 1441 aa17.46■□□□□ 0.39
CDT1-201ENST00000301019 EFCAB6Q5THR3 1501 aa17.46■□□□□ 0.38
CDT1-201ENST00000301019 AP5Z1O43299 807 aa17.45■□□□□ 0.38
CDT1-201ENST00000301019 KCNF1Q9H3M0 494 aa17.45■□□□□ 0.38
CDT1-201ENST00000301019 TNNT3P45378 269 aaPredicted RBP17.45■□□□□ 0.38
CDT1-201ENST00000301019 SLFN14P0C7P3 912 aa17.45■□□□□ 0.38
CDT1-201ENST00000301019 CYP2E1P05181 493 aaPredicted RBP17.44■□□□□ 0.38
CDT1-201ENST00000301019 DIAPH3Q9NSV4 1193 aa17.44■□□□□ 0.38
CDT1-201ENST00000301019 CAPN2P17655 700 aa17.44■□□□□ 0.38
CDT1-201ENST00000301019 CEP152O94986 1710 aa17.44■□□□□ 0.38
CDT1-201ENST00000301019 CFAP70Q5T0N1 1121 aa17.43■□□□□ 0.38
CDT1-201ENST00000301019 TRPM2O94759 1503 aa17.43■□□□□ 0.38
CDT1-201ENST00000301019 TIGD1Q96MW7 591 aa17.43■□□□□ 0.38
CDT1-201ENST00000301019 CNPY2Q9Y2B0 182 aa17.43■□□□□ 0.38
CDT1-201ENST00000301019 GTF2F1P35269 517 aaKnown RBP eCLIP17.43■□□□□ 0.38
CDT1-201ENST00000301019 CAMK4Q16566 473 aa17.43■□□□□ 0.38
CDT1-201ENST00000301019 GTF3C6Q969F1 213 aa17.43■□□□□ 0.38
CDT1-201ENST00000301019 TMX3Q96JJ7 454 aa17.43■□□□□ 0.38
CDT1-201ENST00000301019 OGFRQ9NZT2 677 aa17.43■□□□□ 0.38
CDT1-201ENST00000301019 NRBP1Q9UHY1 535 aa17.43■□□□□ 0.38
CDT1-201ENST00000301019 ABCC3O15438 1527 aa17.43■□□□□ 0.38
CDT1-201ENST00000301019 CHGAP10645 457 aaKnown RBP17.42■□□□□ 0.38
CDT1-201ENST00000301019 CDCA8Q53HL2 280 aa17.42■□□□□ 0.38
CDT1-201ENST00000301019 USP26Q9BXU7 913 aa17.42■□□□□ 0.38
CDT1-201ENST00000301019 SIRT2Q8IXJ6 389 aa17.42■□□□□ 0.38
CDT1-201ENST00000301019 SPHKAPQ2M3C7 1700 aa17.41■□□□□ 0.38
CDT1-201ENST00000301019 MBD3O95983 291 aa17.41■□□□□ 0.38
CDT1-201ENST00000301019 FBLN1P23142 703 aa17.41■□□□□ 0.38
CDT1-201ENST00000301019 NPATQ14207 1427 aa17.41■□□□□ 0.38
CDT1-201ENST00000301019 WDR63Q8IWG1 891 aa17.41■□□□□ 0.38
CDT1-201ENST00000301019 REREQ9P2R6 1566 aa17.41■□□□□ 0.38
CDT1-201ENST00000301019 CTNNA3Q9UI47 895 aa17.4■□□□□ 0.38
CDT1-201ENST00000301019 IRX3P78415 501 aaPredicted RBP17.4■□□□□ 0.38
CDT1-201ENST00000301019 CLEC17AQ6ZS10 378 aa17.4■□□□□ 0.38
CDT1-201ENST00000301019 ARHGEF40Q8TER5 1519 aa17.4■□□□□ 0.38
CDT1-201ENST00000301019 TRAK1Q9UPV9 953 aa17.4■□□□□ 0.38
CDT1-201ENST00000301019 POLR3GO15318 223 aaPredicted RBP17.39■□□□□ 0.37
CDT1-201ENST00000301019 TNNT1P13805 278 aa17.39■□□□□ 0.37
CDT1-201ENST00000301019 SYAP1Q96A49 352 aaPredicted RBP17.39■□□□□ 0.37
CDT1-201ENST00000301019 KIAA1524Q8TCG1 905 aa17.39■□□□□ 0.37
CDT1-201ENST00000301019 TRMT1Q9NXH9 659 aaKnown RBP17.39■□□□□ 0.37
CDT1-201ENST00000301019 TERF2Q15554 542 aa17.38■□□□□ 0.37
CDT1-201ENST00000301019 CCDC186Q7Z3E2 898 aa17.38■□□□□ 0.37
CDT1-201ENST00000301019 AGLP35573 1532 aa17.38■□□□□ 0.37
CDT1-201ENST00000301019 ANKRD7Q92527 254 aa17.38■□□□□ 0.37
CDT1-201ENST00000301019 ASXL1Q8IXJ9 1541 aa17.38■□□□□ 0.37
CDT1-201ENST00000301019 SDSP20132 328 aa17.38■□□□□ 0.37
CDT1-201ENST00000301019 PIK3C2GO75747 1445 aa17.38■□□□□ 0.37
CDT1-201ENST00000301019 CLTCL1P53675 1640 aa17.37■□□□□ 0.37
CDT1-201ENST00000301019 TPD52L1Q16890 204 aaPredicted RBP17.37■□□□□ 0.37
CDT1-201ENST00000301019 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
CDT1-201ENST00000301019 DDX54Q8TDD1 881 aaKnown RBP17.37■□□□□ 0.37
CDT1-201ENST00000301019 FBXW7Q969H0 707 aa17.37■□□□□ 0.37
CDT1-201ENST00000301019 CCDC66A2RUB6 948 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 NUTM2DQ5VT03 806 aaPredicted RBP17.36■□□□□ 0.37
CDT1-201ENST00000301019 TAF3Q5VWG9 929 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 TSPYL6Q8N831 410 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 KDM4AO75164 1064 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 CCDC112Q8NEF3 446 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 TOMM22Q9NS69 142 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 UGGT1Q9NYU2 1555 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
CDT1-201ENST00000301019 LUZP1Q86V48 1076 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 CKAP2LQ8IYA6 745 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 NGEFQ8N5V2 710 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 NEK11Q8NG66 645 aa17.36■□□□□ 0.37
CDT1-201ENST00000301019 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
CDT1-201ENST00000301019 CAMSAP1Q5T5Y3 1602 aa17.35■□□□□ 0.37
CDT1-201ENST00000301019 SECISBP2LQ93073 1101 aaKnown RBP17.35■□□□□ 0.37
CDT1-201ENST00000301019 ANO2Q9NQ90 1003 aa17.35■□□□□ 0.37
CDT1-201ENST00000301019 ELF2Q15723 593 aa17.34■□□□□ 0.37
CDT1-201ENST00000301019 SIGLEC1Q9BZZ2 1709 aa17.34■□□□□ 0.37
CDT1-201ENST00000301019 GYS2P54840 703 aa17.34■□□□□ 0.37
CDT1-201ENST00000301019 HNRNPH2P55795 449 aaKnown RBP17.34■□□□□ 0.37
CDT1-201ENST00000301019 PPIP5K1Q6PFW1 1433 aa17.34■□□□□ 0.37
CDT1-201ENST00000301019 ZC3H13Q5T200 1668 aaKnown RBP17.34■□□□□ 0.37
CDT1-201ENST00000301019 KMT5BQ4FZB7 885 aa17.34■□□□□ 0.37
CDT1-201ENST00000301019 INTS3Q68E01 1043 aaKnown RBP17.34■□□□□ 0.37
CDT1-201ENST00000301019 RILPL2Q969X0 211 aa17.34■□□□□ 0.37
CDT1-201ENST00000301019 DNAJC2Q99543 621 aaKnown RBP17.34■□□□□ 0.37
CDT1-201ENST00000301019 FEZ1Q99689 392 aa17.34■□□□□ 0.37
CDT1-201ENST00000301019 ARID5BQ14865 1188 aa17.33■□□□□ 0.37
CDT1-201ENST00000301019 GORABQ5T7V8 394 aa17.33■□□□□ 0.37
CDT1-201ENST00000301019 KIF18AQ8NI77 898 aa17.33■□□□□ 0.37
CDT1-201ENST00000301019 ARHGAP31Q2M1Z3 1444 aa17.33■□□□□ 0.36
CDT1-201ENST00000301019 TMPOP42166 694 aaKnown RBP17.33■□□□□ 0.36
CDT1-201ENST00000301019 GGNBP2Q9H3C7 697 aa17.33■□□□□ 0.36
CDT1-201ENST00000301019 DDX41Q9UJV9 622 aaKnown RBP17.33■□□□□ 0.36
CDT1-201ENST00000301019 ZNF215Q9UL58 517 aaPredicted RBP17.33■□□□□ 0.36
CDT1-201ENST00000301019 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
CDT1-201ENST00000301019 KRT222Q8N1A0 295 aa17.32■□□□□ 0.36
CDT1-201ENST00000301019 SPTLC3Q9NUV7 552 aa17.32■□□□□ 0.36
CDT1-201ENST00000301019 C10orf67Q8IYJ2 551 aa17.32■□□□□ 0.36
CDT1-201ENST00000301019 PPP6R1Q9UPN7 881 aa17.32■□□□□ 0.36
CDT1-201ENST00000301019 PHF14O94880 888 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 461.4 ms