RNA–Protein interactions for RNA: ENST00000298307.9

KLHDC2-201, Transcript of kelch domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHDC2, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC2-201ENST00000298307 HSP90AB3PQ58FF7 597 aa23.4■■□□□ 1.34
KLHDC2-201ENST00000298307 NOLC1Q14978 699 aaKnown RBP eCLIP23.4■■□□□ 1.34
KLHDC2-201ENST00000298307 RRP12Q5JTH9 1297 aaKnown RBP23.39■■□□□ 1.34
KLHDC2-201ENST00000298307 PRAM1Q96QH2 718 aa23.39■■□□□ 1.34
KLHDC2-201ENST00000298307 NCAPD3P42695 1498 aa23.39■■□□□ 1.34
KLHDC2-201ENST00000298307 SRGAP3O43295 1099 aa23.39■■□□□ 1.33
KLHDC2-201ENST00000298307 AFAP1Q8N556 730 aa23.39■■□□□ 1.33
KLHDC2-201ENST00000298307 AQRO60306 1485 aaKnown RBP eCLIP23.39■■□□□ 1.334e-6■■■■■ 31
KLHDC2-201ENST00000298307 GTF2E1P29083 439 aaPredicted RBP23.39■■□□□ 1.33
KLHDC2-201ENST00000298307 POLR3GO15318 223 aaPredicted RBP23.38■■□□□ 1.33
KLHDC2-201ENST00000298307 SNX21Q969T3 373 aa23.38■■□□□ 1.33
KLHDC2-201ENST00000298307 CKAP2LQ8IYA6 745 aa23.38■■□□□ 1.33
KLHDC2-201ENST00000298307 ZNF830Q96NB3 372 aaPredicted RBP23.38■■□□□ 1.33
KLHDC2-201ENST00000298307 ABCC11Q96J66 1382 aa23.38■■□□□ 1.33
KLHDC2-201ENST00000298307 NUTM1Q86Y26 1132 aa23.38■■□□□ 1.33
KLHDC2-201ENST00000298307 TRMT1Q9NXH9 659 aaKnown RBP23.38■■□□□ 1.33
KLHDC2-201ENST00000298307 URI1O94763 535 aaPredicted RBP23.37■■□□□ 1.33
KLHDC2-201ENST00000298307 HS1BP3Q53T59 392 aa23.37■■□□□ 1.33
KLHDC2-201ENST00000298307 THUMPD2Q9BTF0 503 aaKnown RBP23.37■■□□□ 1.33
KLHDC2-201ENST00000298307 GTF2F1P35269 517 aaKnown RBP eCLIP23.37■■□□□ 1.33
KLHDC2-201ENST00000298307 CFAP100Q494V2 611 aa23.37■■□□□ 1.33
KLHDC2-201ENST00000298307 ANO10Q9NW15 660 aa23.37■■□□□ 1.33
KLHDC2-201ENST00000298307 CABP1Q9NZU7 370 aa23.37■■□□□ 1.33
KLHDC2-201ENST00000298307 MAGEC2Q9UBF1 373 aaPredicted RBP23.37■■□□□ 1.33
KLHDC2-201ENST00000298307 NEMFO60524 1076 aa23.37■■□□□ 1.33
KLHDC2-201ENST00000298307 ZNHIT6Q9NWK9 470 aaKnown RBP23.37■■□□□ 1.33
KLHDC2-201ENST00000298307 HDAC1Q13547 482 aaPredicted RBP23.36■■□□□ 1.33
KLHDC2-201ENST00000298307 HCLS1P14317 486 aaPredicted RBP23.36■■□□□ 1.33
KLHDC2-201ENST00000298307 FAM193AP78312 1265 aa23.36■■□□□ 1.33
KLHDC2-201ENST00000298307 AACSQ86V21 672 aa23.36■■□□□ 1.33
KLHDC2-201ENST00000298307 NOL10Q9BSC4 688 aaKnown RBP23.36■■□□□ 1.33
KLHDC2-201ENST00000298307 DDX11Q96FC9 970 aa23.35■■□□□ 1.33
KLHDC2-201ENST00000298307 KRT32Q14532 448 aa23.35■■□□□ 1.33
KLHDC2-201ENST00000298307 SH2B1Q9NRF2 756 aaPredicted RBP23.35■■□□□ 1.33
KLHDC2-201ENST00000298307 ZSCAN12O43309 604 aa23.35■■□□□ 1.33
KLHDC2-201ENST00000298307 CCDC94Q9BW85 323 aaPredicted RBP23.35■■□□□ 1.33
KLHDC2-201ENST00000298307 LIMCH1Q9UPQ0 1083 aa23.34■■□□□ 1.33
KLHDC2-201ENST00000298307 SART3Q15020 963 aaKnown RBP23.34■■□□□ 1.33
KLHDC2-201ENST00000298307 RAB3GAP1Q15042 981 aa23.34■■□□□ 1.33
KLHDC2-201ENST00000298307 PRPF40BQ6NWY9 871 aaKnown RBP23.34■■□□□ 1.33
KLHDC2-201ENST00000298307 AMOTL1Q8IY63 956 aa23.34■■□□□ 1.33
KLHDC2-201ENST00000298307 ABCC5O15440 1437 aa23.34■■□□□ 1.33
KLHDC2-201ENST00000298307 NUCB1Q02818 461 aa23.34■■□□□ 1.33
KLHDC2-201ENST00000298307 PAXBP1Q9Y5B6 917 aa23.34■■□□□ 1.33
KLHDC2-201ENST00000298307 SIL1Q9H173 461 aa23.33■■□□□ 1.33
KLHDC2-201ENST00000298307 SEC24BO95487 1268 aa23.33■■□□□ 1.33
KLHDC2-201ENST00000298307 PRIM1P49642 420 aaKnown RBP23.33■■□□□ 1.33
KLHDC2-201ENST00000298307 GBP3Q9H0R5 595 aa23.33■■□□□ 1.33
KLHDC2-201ENST00000298307 EPRSP07814 1512 aaKnown RBP23.33■■□□□ 1.33
KLHDC2-201ENST00000298307 GOLGA6L10A6NI86 522 aa23.33■■□□□ 1.33
KLHDC2-201ENST00000298307 TIGD1Q96MW7 591 aa23.33■■□□□ 1.33
KLHDC2-201ENST00000298307 CDK19Q9BWU1 502 aa23.33■■□□□ 1.32
KLHDC2-201ENST00000298307 CDK13Q14004 1512 aaKnown RBP23.32■■□□□ 1.32
KLHDC2-201ENST00000298307 UBE2HP62256 183 aa23.32■■□□□ 1.32
KLHDC2-201ENST00000298307 DDX19AQ9NUU7 478 aaKnown RBP23.32■■□□□ 1.32
KLHDC2-201ENST00000298307 KRT222Q8N1A0 295 aa23.31■■□□□ 1.32
KLHDC2-201ENST00000298307 GTPBP4Q9BZE4 634 aaKnown RBP23.31■■□□□ 1.32
KLHDC2-201ENST00000298307 STX6O43752 255 aa23.31■■□□□ 1.32
KLHDC2-201ENST00000298307 ARHGAP29Q52LW3 1261 aa23.31■■□□□ 1.32
KLHDC2-201ENST00000298307 CCDC181Q5TID7 509 aa23.31■■□□□ 1.32
KLHDC2-201ENST00000298307 SMC5Q8IY18 1101 aa23.31■■□□□ 1.32
KLHDC2-201ENST00000298307 MYO6Q9UM54 1294 aa23.31■■□□□ 1.32
KLHDC2-201ENST00000298307 BMS1Q14692 1282 aaKnown RBP23.31■■□□□ 1.32
KLHDC2-201ENST00000298307 CEP135Q66GS9 1140 aa23.31■■□□□ 1.32
KLHDC2-201ENST00000298307 EPS15P42566 896 aa23.3■■□□□ 1.32
KLHDC2-201ENST00000298307 DISP3Q9P2K9 1392 aa23.3■■□□□ 1.32
KLHDC2-201ENST00000298307 TTC22Q5TAA0 569 aa23.3■■□□□ 1.32
KLHDC2-201ENST00000298307 CASQ1P31415 396 aa23.3■■□□□ 1.32
KLHDC2-201ENST00000298307 NLRP6P59044 892 aa23.3■■□□□ 1.32
KLHDC2-201ENST00000298307 TXLNAP40222 546 aa23.29■■□□□ 1.32
KLHDC2-201ENST00000298307 EPB41L2O43491 1005 aaKnown RBP23.29■■□□□ 1.32
KLHDC2-201ENST00000298307 NUTM2GQ5VZR2 741 aa23.28■■□□□ 1.32
KLHDC2-201ENST00000298307 TMX3Q96JJ7 454 aa23.28■■□□□ 1.32
KLHDC2-201ENST00000298307 CTAGE5O15320 804 aa23.28■■□□□ 1.32
KLHDC2-201ENST00000298307 GSDMDP57764 484 aa23.28■■□□□ 1.32
KLHDC2-201ENST00000298307 GIMAP6Q6P9H5 292 aa23.28■■□□□ 1.32
KLHDC2-201ENST00000298307 IQCEQ6IPM2 695 aa23.28■■□□□ 1.32
KLHDC2-201ENST00000298307 KIF1BPQ96EK5 621 aa23.28■■□□□ 1.32
KLHDC2-201ENST00000298307 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
KLHDC2-201ENST00000298307 GLRX3O76003 335 aaKnown RBP23.27■■□□□ 1.32
KLHDC2-201ENST00000298307 ZNF165P49910 485 aa23.27■■□□□ 1.32
KLHDC2-201ENST00000298307 STK11IPQ8N1F8 1099 aa23.27■■□□□ 1.32
KLHDC2-201ENST00000298307 DDX54Q8TDD1 881 aaKnown RBP23.27■■□□□ 1.32
KLHDC2-201ENST00000298307 TTC12Q9H892 705 aaPredicted RBP23.27■■□□□ 1.32
KLHDC2-201ENST00000298307 TBC1D2BQ9UPU7 963 aa23.27■■□□□ 1.32
KLHDC2-201ENST00000298307 VPS37DQ86XT2 251 aa23.27■■□□□ 1.32
KLHDC2-201ENST00000298307 CRACR2AQ9BSW2 395 aa23.27■■□□□ 1.32
KLHDC2-201ENST00000298307 LARP6Q9BRS8 491 aaKnown RBP23.27■■□□□ 1.32
KLHDC2-201ENST00000298307 RBM42Q9BTD8 480 aaKnown RBP23.26■■□□□ 1.31
KLHDC2-201ENST00000298307 TRIM34Q9BYJ4 488 aa23.26■■□□□ 1.31
KLHDC2-201ENST00000298307 SNW1Q13573 536 aaKnown RBP23.26■■□□□ 1.31
KLHDC2-201ENST00000298307 JAKMIP3Q5VZ66 844 aa23.26■■□□□ 1.31
KLHDC2-201ENST00000298307 SMAP1Q8IYB5 467 aaPredicted RBP23.26■■□□□ 1.31
KLHDC2-201ENST00000298307 BBXQ8WY36 941 aaPredicted RBP23.26■■□□□ 1.31
KLHDC2-201ENST00000298307 RAB11FIP3O75154 756 aa23.25■■□□□ 1.31
KLHDC2-201ENST00000298307 GJB2P29033 226 aa23.25■■□□□ 1.31
KLHDC2-201ENST00000298307 ATAD2Q6PL18 1390 aa23.25■■□□□ 1.31
KLHDC2-201ENST00000298307 PSME1Q06323 249 aa23.25■■□□□ 1.31
KLHDC2-201ENST00000298307 PARD3Q8TEW0 1356 aa23.25■■□□□ 1.31
KLHDC2-201ENST00000298307 TOP1P11387 765 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms