RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 ABCA5Q8WWZ7 1642 aa18.15■□□□□ 0.5
ARHGEF28-202ENST00000296799 DNAAF4Q8WXU2 420 aa18.15■□□□□ 0.5
ARHGEF28-202ENST00000296799 CTDP1Q9Y5B0 961 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF28-202ENST00000296799 CCDC73Q6ZRK6 1079 aa18.14■□□□□ 0.49
ARHGEF28-202ENST00000296799 PUS7Q96PZ0 661 aaKnown RBP18.14■□□□□ 0.49
ARHGEF28-202ENST00000296799 SAMD1Q6SPF0 538 aaPredicted RBP18.14■□□□□ 0.49
ARHGEF28-202ENST00000296799 BICDL1Q6ZP65 573 aa18.14■□□□□ 0.49
ARHGEF28-202ENST00000296799 NUTM1Q86Y26 1132 aa18.14■□□□□ 0.49
ARHGEF28-202ENST00000296799 IFNL2Q8IZJ0 200 aa18.14■□□□□ 0.49
ARHGEF28-202ENST00000296799 POLKQ9UBT6 870 aa18.14■□□□□ 0.49
ARHGEF28-202ENST00000296799 PDCP20941 246 aa18.14■□□□□ 0.49
ARHGEF28-202ENST00000296799 CARD14Q9BXL6 1004 aa18.14■□□□□ 0.49
ARHGEF28-202ENST00000296799 PPIP5K1Q6PFW1 1433 aa18.13■□□□□ 0.49
ARHGEF28-202ENST00000296799 MYD88Q99836 296 aa18.13■□□□□ 0.49
ARHGEF28-202ENST00000296799 CYP46A1Q9Y6A2 500 aa18.13■□□□□ 0.49
ARHGEF28-202ENST00000296799 PZPP20742 1482 aa18.13■□□□□ 0.49
ARHGEF28-202ENST00000296799 CWC27Q6UX04 472 aaKnown RBP18.13■□□□□ 0.49
ARHGEF28-202ENST00000296799 NGLY1Q96IV0 654 aa18.12■□□□□ 0.49
ARHGEF28-202ENST00000296799 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
ARHGEF28-202ENST00000296799 EXOC5O00471 708 aa18.12■□□□□ 0.49
ARHGEF28-202ENST00000296799 SMARCA5O60264 1052 aaPredicted RBP18.12■□□□□ 0.49
ARHGEF28-202ENST00000296799 KCNA6P17658 529 aa18.11■□□□□ 0.49
ARHGEF28-202ENST00000296799 ASXL1Q8IXJ9 1541 aa18.11■□□□□ 0.49
ARHGEF28-202ENST00000296799 IL16Q14005 1332 aa18.11■□□□□ 0.49
ARHGEF28-202ENST00000296799 PARD3Q8TEW0 1356 aa18.11■□□□□ 0.49
ARHGEF28-202ENST00000296799 KDM4AO75164 1064 aa18.11■□□□□ 0.49
ARHGEF28-202ENST00000296799 AEBP1Q8IUX7 1158 aa18.11■□□□□ 0.49
ARHGEF28-202ENST00000296799 HYPKQ9NX55 129 aa18.1■□□□□ 0.49
ARHGEF28-202ENST00000296799 LRRFIP2Q9Y608 721 aaKnown RBP18.1■□□□□ 0.49
ARHGEF28-202ENST00000296799 NPHP3Q7Z494 1330 aa18.1■□□□□ 0.49
ARHGEF28-202ENST00000296799 XBP1P17861 261 aa18.1■□□□□ 0.49
ARHGEF28-202ENST00000296799 MX1P20591 662 aa18.09■□□□□ 0.49
ARHGEF28-202ENST00000296799 SF3B2Q13435 895 aaKnown RBP18.09■□□□□ 0.49
ARHGEF28-202ENST00000296799 MSH6P52701 1360 aa18.09■□□□□ 0.49
ARHGEF28-202ENST00000296799 PER1O15534 1290 aaPredicted RBP18.09■□□□□ 0.49
ARHGEF28-202ENST00000296799 GLRX3O76003 335 aaKnown RBP18.09■□□□□ 0.49
ARHGEF28-202ENST00000296799 ATP2B1P20020 1258 aa18.09■□□□□ 0.49
ARHGEF28-202ENST00000296799 NACAP1Q9BZK3 213 aa18.09■□□□□ 0.49
ARHGEF28-202ENST00000296799 PTPRCP08575 1304 aa18.09■□□□□ 0.49
ARHGEF28-202ENST00000296799 NCKAP5LQ9HCH0 1330 aa18.09■□□□□ 0.49
ARHGEF28-202ENST00000296799 HOOK1Q9UJC3 728 aaKnown RBP18.09■□□□□ 0.49
ARHGEF28-202ENST00000296799 CEP170Q5SW79 1584 aa18.09■□□□□ 0.49
ARHGEF28-202ENST00000296799 ANXA1P04083 346 aa18.08■□□□□ 0.49
ARHGEF28-202ENST00000296799 EIF4A2Q14240 407 aaKnown RBP18.08■□□□□ 0.49
ARHGEF28-202ENST00000296799 SASS6Q6UVJ0 657 aa18.08■□□□□ 0.49
ARHGEF28-202ENST00000296799 SDF4Q9BRK5 362 aa18.08■□□□□ 0.49
ARHGEF28-202ENST00000296799 TBX22Q9Y458 520 aa18.08■□□□□ 0.49
ARHGEF28-202ENST00000296799 A0A087WZG4 1122 aa18.08■□□□□ 0.48
ARHGEF28-202ENST00000296799 PI4KAP2A4QPH2 592 aa18.08■□□□□ 0.48
ARHGEF28-202ENST00000296799 HSPA2P54652 639 aa18.08■□□□□ 0.48
ARHGEF28-202ENST00000296799 BLOC1S2Q6QNY1 142 aa18.08■□□□□ 0.48
ARHGEF28-202ENST00000296799 PI4KAP1Q8N8J0 262 aa18.08■□□□□ 0.48
ARHGEF28-202ENST00000296799 TCEAL9Q9UHQ7 104 aa18.08■□□□□ 0.48
ARHGEF28-202ENST00000296799 TPM3P06753 285 aa18.08■□□□□ 0.48
ARHGEF28-202ENST00000296799 TSR1Q2NL82 804 aaKnown RBP18.08■□□□□ 0.48
ARHGEF28-202ENST00000296799 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 IGHMBP2P38935 993 aaKnown RBP18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 METTL24Q5JXM2 366 aa18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 CCDC47Q96A33 483 aaKnown RBP18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 RAB11FIP3O75154 756 aa18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 SLC3A2P08195 630 aaKnown RBP18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 C19orf44Q9H6X5 657 aa18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 K7ELQ4 463 aaPredicted RBP18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 ZBTB3Q9H5J0 574 aa18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 STK3Q13188 491 aa18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 ZSCAN25Q6NSZ9 544 aa18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 PPP1R1BQ9UD71 204 aaPredicted RBP18.07■□□□□ 0.48
ARHGEF28-202ENST00000296799 TRAK2O60296 914 aa18.06■□□□□ 0.48
ARHGEF28-202ENST00000296799 IDH1O75874 414 aaKnown RBP18.06■□□□□ 0.48
ARHGEF28-202ENST00000296799 STK11IPQ8N1F8 1099 aa18.06■□□□□ 0.48
ARHGEF28-202ENST00000296799 BRMS1Q9HCU9 246 aa18.06■□□□□ 0.48
ARHGEF28-202ENST00000296799 FIBPO43427 364 aa18.06■□□□□ 0.48
ARHGEF28-202ENST00000296799 BOLA2Q9H3K6 86 aa18.06■□□□□ 0.48
ARHGEF28-202ENST00000296799 ZNF652Q9Y2D9 606 aa18.06■□□□□ 0.48
ARHGEF28-202ENST00000296799 POLR3AO14802 1390 aaPredicted RBP18.06■□□□□ 0.48
ARHGEF28-202ENST00000296799 TPM1P09493 284 aa18.05■□□□□ 0.48
ARHGEF28-202ENST00000296799 NCBP3Q53F19 620 aaKnown RBP18.05■□□□□ 0.48
ARHGEF28-202ENST00000296799 ARHGEF12Q9NZN5 1544 aa18.05■□□□□ 0.48
ARHGEF28-202ENST00000296799 ADGRL2O95490 1459 aa18.05■□□□□ 0.48
ARHGEF28-202ENST00000296799 ANKRD1Q15327 319 aa18.05■□□□□ 0.48
ARHGEF28-202ENST00000296799 IKQ13123 557 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF28-202ENST00000296799 SPINK5Q9NQ38 1064 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF28-202ENST00000296799 PRPF40AO75400 957 aaKnown RBP18.05■□□□□ 0.48
ARHGEF28-202ENST00000296799 JAKMIP1Q96N16 626 aaKnown RBP18.04■□□□□ 0.48
ARHGEF28-202ENST00000296799 LRP2BPQ9P2M1 347 aa18.04■□□□□ 0.48
ARHGEF28-202ENST00000296799 ABCF2Q9UG63 623 aa18.04■□□□□ 0.48
ARHGEF28-202ENST00000296799 YTHDC2Q9H6S0 1430 aaKnown RBP18.04■□□□□ 0.48
ARHGEF28-202ENST00000296799 NPATQ14207 1427 aa18.04■□□□□ 0.48
ARHGEF28-202ENST00000296799 A0A1W2PP64 1363 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 CWC22Q9HCG8 908 aaKnown RBP18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 TRMT112Q9UI30 125 aaKnown RBP18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 MAP3K2Q9Y2U5 619 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 SAMD9Q5K651 1589 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 MBD3O95983 291 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 IFIT5Q13325 482 aaKnown RBP18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 CCDC8Q9H0W5 538 aaPredicted RBP18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 KAT6BQ8WYB5 2073 aa18.03■□□□□ 0.48
ARHGEF28-202ENST00000296799 CAVIN1Q6NZI2 390 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms