RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 CD2APQ9Y5K6 639 aa25.48■■□□□ 1.67
LRPAP1-201ENST00000296325 FAM208AQ9UK61 1670 aaKnown RBP25.46■■□□□ 1.67
LRPAP1-201ENST00000296325 SYTL4Q96C24 671 aaPredicted RBP25.46■■□□□ 1.67
LRPAP1-201ENST00000296325 CCNL1Q9UK58 526 aaPredicted RBP25.46■■□□□ 1.67
LRPAP1-201ENST00000296325 MSL1Q68DK7 614 aa25.44■■□□□ 1.66
LRPAP1-201ENST00000296325 IP6K1Q92551 441 aa25.44■■□□□ 1.66
LRPAP1-201ENST00000296325 L3MBTL2Q969R5 705 aa25.42■■□□□ 1.66
LRPAP1-201ENST00000296325 EDC4Q6P2E9 1401 aaKnown RBP25.41■■□□□ 1.66
LRPAP1-201ENST00000296325 KIF3CO14782 793 aa25.4■■□□□ 1.66
LRPAP1-201ENST00000296325 MSH5O43196 834 aa25.4■■□□□ 1.66
LRPAP1-201ENST00000296325 ZNF526Q8TF50 670 aaPredicted RBP25.4■■□□□ 1.66
LRPAP1-201ENST00000296325 MEGF6O75095 1541 aa25.39■■□□□ 1.66
LRPAP1-201ENST00000296325 ROCK2O75116 1388 aaKnown RBP25.39■■□□□ 1.65
LRPAP1-201ENST00000296325 USP47Q96K76 1375 aa25.38■■□□□ 1.65
LRPAP1-201ENST00000296325 ZCRB1Q8TBF4 217 aaKnown RBP25.37■■□□□ 1.65
LRPAP1-201ENST00000296325 C5P01031 1676 aa25.36■■□□□ 1.65
LRPAP1-201ENST00000296325 LTV1Q96GA3 475 aaPredicted RBP25.35■■□□□ 1.65
LRPAP1-201ENST00000296325 FLAD1Q8NFF5 587 aa25.34■■□□□ 1.65
LRPAP1-201ENST00000296325 DNAJC5GQ8N7S2 189 aa25.33■■□□□ 1.65
LRPAP1-201ENST00000296325 SLC12A5Q9H2X9 1139 aa25.33■■□□□ 1.65
LRPAP1-201ENST00000296325 A0A1W2PP64 1363 aa25.32■■□□□ 1.64
LRPAP1-201ENST00000296325 HDGFL2Q7Z4V5 671 aaPredicted RBP25.32■■□□□ 1.64
LRPAP1-201ENST00000296325 CICQ96RK0 1608 aaPredicted RBP25.32■■□□□ 1.64
LRPAP1-201ENST00000296325 TAF1LQ8IZX4 1826 aa25.32■■□□□ 1.64
LRPAP1-201ENST00000296325 IGSF1Q8N6C5 1336 aa25.32■■□□□ 1.64
LRPAP1-201ENST00000296325 HOXC9P31274 260 aa25.31■■□□□ 1.64
LRPAP1-201ENST00000296325 APLP1P51693 650 aa25.31■■□□□ 1.64
LRPAP1-201ENST00000296325 TOGARAM1Q9Y4F4 1720 aa25.31■■□□□ 1.64
LRPAP1-201ENST00000296325 MAP3K19Q56UN5 1328 aa25.31■■□□□ 1.64
LRPAP1-201ENST00000296325 AMIGO3Q86WK7 504 aa25.3■■□□□ 1.64
LRPAP1-201ENST00000296325 RGPD2P0DJD1 1756 aa25.3■■□□□ 1.64
LRPAP1-201ENST00000296325 TMC1Q8TDI8 760 aa25.28■■□□□ 1.64
LRPAP1-201ENST00000296325 HMGB2P26583 209 aaKnown RBP25.27■■□□□ 1.64
LRPAP1-201ENST00000296325 PALLDQ8WX93 1383 aa25.27■■□□□ 1.64
LRPAP1-201ENST00000296325 C4BP0C0L5 1744 aa25.26■■□□□ 1.63
LRPAP1-201ENST00000296325 TERF2IPQ9NYB0 399 aa25.26■■□□□ 1.63
LRPAP1-201ENST00000296325 CGNL1Q0VF96 1302 aa25.26■■□□□ 1.63
LRPAP1-201ENST00000296325 UBR3Q6ZT12 1888 aa25.24■■□□□ 1.63
LRPAP1-201ENST00000296325 WWC3Q9ULE0 1092 aa25.24■■□□□ 1.63
LRPAP1-201ENST00000296325 NBPF6Q5VWK0 638 aa25.23■■□□□ 1.63
LRPAP1-201ENST00000296325 NBPF4Q96M43 638 aa25.23■■□□□ 1.63
LRPAP1-201ENST00000296325 RTL1A6NKG5 1358 aa25.22■■□□□ 1.63
LRPAP1-201ENST00000296325 PCNTO95613 3336 aa25.22■■□□□ 1.63
LRPAP1-201ENST00000296325 TOMM70O94826 608 aa25.22■■□□□ 1.63
LRPAP1-201ENST00000296325 FBLN1P23142 703 aa25.22■■□□□ 1.63
LRPAP1-201ENST00000296325 PUS7Q96PZ0 661 aaKnown RBP25.22■■□□□ 1.63
LRPAP1-201ENST00000296325 AMPHP49418 695 aa25.21■■□□□ 1.63
LRPAP1-201ENST00000296325 NSD3Q9BZ95 1437 aa25.19■■□□□ 1.62
LRPAP1-201ENST00000296325 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.18■■□□□ 1.62
LRPAP1-201ENST00000296325 SMIM5Q71RC9 77 aa25.18■■□□□ 1.62
LRPAP1-201ENST00000296325 COG3Q96JB2 828 aa25.18■■□□□ 1.62
LRPAP1-201ENST00000296325 AK7Q96M32 723 aa25.18■■□□□ 1.62
LRPAP1-201ENST00000296325 PCDH11XQ9BZA7 1347 aa25.17■■□□□ 1.62
LRPAP1-201ENST00000296325 PCDH11YQ9BZA8 1340 aa25.17■■□□□ 1.62
LRPAP1-201ENST00000296325 SIN3AQ96ST3 1273 aa25.17■■□□□ 1.62
LRPAP1-201ENST00000296325 PXDNLA1KZ92 1463 aa25.16■■□□□ 1.62
LRPAP1-201ENST00000296325 SSFA2P28290 1259 aa25.16■■□□□ 1.62
LRPAP1-201ENST00000296325 USHBP1Q8N6Y0 703 aa25.16■■□□□ 1.62
LRPAP1-201ENST00000296325 RAPGEF4Q8WZA2 1011 aa25.16■■□□□ 1.62
LRPAP1-201ENST00000296325 KIAA1551Q9HCM1 1747 aa25.16■■□□□ 1.62
LRPAP1-201ENST00000296325 MAP2P11137 1827 aaKnown RBP25.15■■□□□ 1.62
LRPAP1-201ENST00000296325 MPRIPQ6WCQ1 1025 aa25.15■■□□□ 1.62
LRPAP1-201ENST00000296325 SMARCC1Q92922 1105 aaPredicted RBP25.15■■□□□ 1.62
LRPAP1-201ENST00000296325 WDR90Q96KV7 1748 aa25.15■■□□□ 1.62
LRPAP1-201ENST00000296325 CYP27B1O15528 508 aa25.14■■□□□ 1.62
LRPAP1-201ENST00000296325 PHF14O94880 888 aa25.14■■□□□ 1.62
LRPAP1-201ENST00000296325 KIF13BQ9NQT8 1826 aa25.14■■□□□ 1.61
LRPAP1-201ENST00000296325 COL13A1Q5TAT6 717 aaPredicted RBP25.13■■□□□ 1.61
LRPAP1-201ENST00000296325 JMYQ8N9B5 988 aa25.13■■□□□ 1.61
LRPAP1-201ENST00000296325 ITGB4P16144 1822 aa25.13■■□□□ 1.61
LRPAP1-201ENST00000296325 TATP17735 454 aaPredicted RBP25.12■■□□□ 1.61
LRPAP1-201ENST00000296325 NMRK2Q9NPI5 230 aa25.12■■□□□ 1.61
LRPAP1-201ENST00000296325 RRS1Q15050 365 aaKnown RBP25.11■■□□□ 1.61
LRPAP1-201ENST00000296325 CARD11Q9BXL7 1154 aa25.11■■□□□ 1.61
LRPAP1-201ENST00000296325 LINC00116Q8NCU8 138 aa25.1■■□□□ 1.61
LRPAP1-201ENST00000296325 RBM46Q8TBY0 533 aaKnown RBP25.09■■□□□ 1.61
LRPAP1-201ENST00000296325 PIGBQ92521 554 aa25.09■■□□□ 1.61
LRPAP1-201ENST00000296325 KLRG1Q96E93 195 aa25.09■■□□□ 1.61
LRPAP1-201ENST00000296325 SMG6Q86US8 1419 aaKnown RBP25.09■■□□□ 1.61
LRPAP1-201ENST00000296325 INSRP06213 1382 aa25.07■■□□□ 1.6
LRPAP1-201ENST00000296325 PKD1L3Q7Z443 1732 aa25.07■■□□□ 1.6
LRPAP1-201ENST00000296325 C10orf71Q711Q0 1435 aa25.07■■□□□ 1.6
LRPAP1-201ENST00000296325 LOC102724428A0A0B4J2F2 783 aa25.07■■□□□ 1.6
LRPAP1-201ENST00000296325 SIK1P57059 783 aa25.07■■□□□ 1.6
LRPAP1-201ENST00000296325 MMP10P09238 476 aa25.06■■□□□ 1.6
LRPAP1-201ENST00000296325 TGFB2P61812 414 aa25.06■■□□□ 1.6
LRPAP1-201ENST00000296325 NKX1-1Q15270 411 aaPredicted RBP25.06■■□□□ 1.6
LRPAP1-201ENST00000296325 N4BP2Q86UW6 1770 aaPredicted RBP25.05■■□□□ 1.6
LRPAP1-201ENST00000296325 NCAPD2Q15021 1401 aa25.04■■□□□ 1.6
LRPAP1-201ENST00000296325 HTRA3P83110 453 aa25.04■■□□□ 1.6
LRPAP1-201ENST00000296325 NEUROD1Q13562 356 aa25.04■■□□□ 1.6
LRPAP1-201ENST00000296325 ITPK1Q13572 414 aa25.04■■□□□ 1.6
LRPAP1-201ENST00000296325 HSP90AB2PQ58FF8 381 aa25.04■■□□□ 1.6
LRPAP1-201ENST00000296325 TESK2Q96S53 571 aa25.04■■□□□ 1.6
LRPAP1-201ENST00000296325 BCS1LQ9Y276 419 aa25.04■■□□□ 1.6
LRPAP1-201ENST00000296325 BRCA1P38398 1863 aaKnown RBP25.02■■□□□ 1.6
LRPAP1-201ENST00000296325 FYB1O15117 783 aa25.02■■□□□ 1.6
LRPAP1-201ENST00000296325 GNPATO15228 680 aa25.02■■□□□ 1.6
LRPAP1-201ENST00000296325 KIF24Q5T7B8 1368 aa25.02■■□□□ 1.6
LRPAP1-201ENST00000296325 A0A0G2JLW4 131 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms