RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 TIGD1Q96MW7 591 aa19.61■□□□□ 0.73
LRRC58-201ENST00000295628 NUP62CLQ9H1M0 184 aa19.6■□□□□ 0.73
LRRC58-201ENST00000295628 UBA5Q9GZZ9 404 aa19.6■□□□□ 0.73
LRRC58-201ENST00000295628 KIF5CO60282 957 aa19.6■□□□□ 0.73
LRRC58-201ENST00000295628 CACNA2D4Q7Z3S7 1137 aa19.6■□□□□ 0.73
LRRC58-201ENST00000295628 TMEM87AQ8NBN3 555 aa19.6■□□□□ 0.73
LRRC58-201ENST00000295628 RRP9O43818 475 aaKnown RBP19.59■□□□□ 0.73
LRRC58-201ENST00000295628 DAAM2Q86T65 1068 aa19.59■□□□□ 0.73
LRRC58-201ENST00000295628 GBP3Q9H0R5 595 aa19.59■□□□□ 0.73
LRRC58-201ENST00000295628 KLHL10Q6JEL2 608 aa19.59■□□□□ 0.73
LRRC58-201ENST00000295628 TDO2P48775 406 aa19.59■□□□□ 0.73
LRRC58-201ENST00000295628 SPECC1Q5M775 1068 aa19.59■□□□□ 0.73
LRRC58-201ENST00000295628 ATF3P18847 181 aa19.58■□□□□ 0.73
LRRC58-201ENST00000295628 CCDC150Q8NCX0 1101 aa19.58■□□□□ 0.72
LRRC58-201ENST00000295628 GIGYF2Q6Y7W6 1299 aaKnown RBP19.58■□□□□ 0.72
LRRC58-201ENST00000295628 MCM3P25205 808 aa19.57■□□□□ 0.72
LRRC58-201ENST00000295628 PTPN14Q15678 1187 aa19.57■□□□□ 0.72
LRRC58-201ENST00000295628 MRPS9P82933 396 aaKnown RBP19.57■□□□□ 0.72
LRRC58-201ENST00000295628 CGNQ9P2M7 1197 aaKnown RBP19.57■□□□□ 0.72
LRRC58-201ENST00000295628 FERMT2Q96AC1 680 aa19.57■□□□□ 0.72
LRRC58-201ENST00000295628 CDKL5O76039 1030 aa19.57■□□□□ 0.72
LRRC58-201ENST00000295628 GNAI2P04899 355 aa19.57■□□□□ 0.72
LRRC58-201ENST00000295628 DRC1Q96MC2 740 aa19.57■□□□□ 0.72
LRRC58-201ENST00000295628 UBAC1Q9BSL1 405 aa19.56■□□□□ 0.72
LRRC58-201ENST00000295628 PRKRIP1Q9H875 184 aaPredicted RBP19.56■□□□□ 0.72
LRRC58-201ENST00000295628 PABPN1LA6NDY0 278 aaKnown RBP19.56■□□□□ 0.72
LRRC58-201ENST00000295628 HLTFQ14527 1009 aaKnown RBP eCLIP19.56■□□□□ 0.72
LRRC58-201ENST00000295628 CTR9Q6PD62 1173 aa19.56■□□□□ 0.72
LRRC58-201ENST00000295628 VGFO15240 615 aaPredicted RBP19.56■□□□□ 0.72
LRRC58-201ENST00000295628 K7ELQ4 463 aaPredicted RBP19.55■□□□□ 0.72
LRRC58-201ENST00000295628 URI1O94763 535 aaPredicted RBP19.55■□□□□ 0.72
LRRC58-201ENST00000295628 KIF4BQ2VIQ3 1234 aa19.55■□□□□ 0.72
LRRC58-201ENST00000295628 MYL6BP14649 208 aa19.55■□□□□ 0.72
LRRC58-201ENST00000295628 PPP4R3AQ6IN85 833 aa19.55■□□□□ 0.72
LRRC58-201ENST00000295628 FKBP15Q5T1M5 1219 aa19.55■□□□□ 0.72
LRRC58-201ENST00000295628 TSG101Q99816 390 aa19.54■□□□□ 0.72
LRRC58-201ENST00000295628 ARL1P40616 181 aaPredicted RBP19.54■□□□□ 0.72
LRRC58-201ENST00000295628 GNAI3P08754 354 aa19.54■□□□□ 0.72
LRRC58-201ENST00000295628 C6orf163Q5TEZ5 329 aa19.54■□□□□ 0.72
LRRC58-201ENST00000295628 AEBP2Q6ZN18 517 aaPredicted RBP19.54■□□□□ 0.72
LRRC58-201ENST00000295628 NUP88Q99567 741 aaPredicted RBP19.54■□□□□ 0.72
LRRC58-201ENST00000295628 SYCE3A1L190 88 aa19.53■□□□□ 0.72
LRRC58-201ENST00000295628 LMAN1P49257 510 aa19.53■□□□□ 0.72
LRRC58-201ENST00000295628 PRPF4BQ13523 1007 aaKnown RBP19.53■□□□□ 0.72
LRRC58-201ENST00000295628 CEP131Q9UPN4 1083 aa19.53■□□□□ 0.72
LRRC58-201ENST00000295628 PPP1R14CQ8TAE6 165 aa19.53■□□□□ 0.72
LRRC58-201ENST00000295628 GTF2F1P35269 517 aaKnown RBP eCLIP19.53■□□□□ 0.72
LRRC58-201ENST00000295628 CWC27Q6UX04 472 aaKnown RBP19.53■□□□□ 0.72
LRRC58-201ENST00000295628 PDRG1Q9NUG6 133 aa19.53■□□□□ 0.72
LRRC58-201ENST00000295628 ATP2C2O75185 946 aa19.53■□□□□ 0.72
LRRC58-201ENST00000295628 MPHOSPH8Q99549 860 aa19.53■□□□□ 0.72
LRRC58-201ENST00000295628 FAM107BQ9H098 131 aa19.53■□□□□ 0.72
LRRC58-201ENST00000295628 LIG1P18858 919 aa19.53■□□□□ 0.72
LRRC58-201ENST00000295628 TNIP1Q15025 636 aa19.53■□□□□ 0.72
LRRC58-201ENST00000295628 TSNARE1Q96NA8 513 aa19.52■□□□□ 0.72
LRRC58-201ENST00000295628 PAIP2Q9BPZ3 127 aaKnown RBP19.52■□□□□ 0.72
LRRC58-201ENST00000295628 TAOK3Q9H2K8 898 aa19.52■□□□□ 0.72
LRRC58-201ENST00000295628 NOB1Q9ULX3 412 aaKnown RBP19.52■□□□□ 0.72
LRRC58-201ENST00000295628 CALCOCO1Q9P1Z2 691 aa19.52■□□□□ 0.72
LRRC58-201ENST00000295628 RB1CC1Q8TDY2 1594 aa19.52■□□□□ 0.72
LRRC58-201ENST00000295628 PLCD3Q8N3E9 789 aa19.52■□□□□ 0.72
LRRC58-201ENST00000295628 SEC63Q9UGP8 760 aaKnown RBP19.52■□□□□ 0.72
LRRC58-201ENST00000295628 VPS36Q86VN1 386 aa19.52■□□□□ 0.71
LRRC58-201ENST00000295628 NAP1L3Q99457 506 aaPredicted RBP19.52■□□□□ 0.71
LRRC58-201ENST00000295628 STRN4Q9NRL3 753 aa19.52■□□□□ 0.71
LRRC58-201ENST00000295628 PDZRN3Q9UPQ7 1066 aa19.52■□□□□ 0.71
LRRC58-201ENST00000295628 FSD2A1L4K1 749 aa19.51■□□□□ 0.71
LRRC58-201ENST00000295628 MAATS1Q7Z4T9 603 aa19.51■□□□□ 0.71
LRRC58-201ENST00000295628 MAP3K11Q16584 847 aa19.51■□□□□ 0.71
LRRC58-201ENST00000295628 CCDC96Q2M329 555 aa19.51■□□□□ 0.71
LRRC58-201ENST00000295628 KIF18AQ8NI77 898 aa19.51■□□□□ 0.71
LRRC58-201ENST00000295628 JAKMIP1Q96N16 626 aaKnown RBP19.51■□□□□ 0.71
LRRC58-201ENST00000295628 SSX2IPQ9Y2D8 614 aa19.51■□□□□ 0.71
LRRC58-201ENST00000295628 ZSCAN12O43309 604 aa19.51■□□□□ 0.71
LRRC58-201ENST00000295628 MXRA7P84157 204 aa19.51■□□□□ 0.71
LRRC58-201ENST00000295628 TRMT1Q9NXH9 659 aaKnown RBP19.5■□□□□ 0.71
LRRC58-201ENST00000295628 A0A1W2PRG0 241 aa19.5■□□□□ 0.71
LRRC58-201ENST00000295628 WDR78Q5VTH9 848 aa19.5■□□□□ 0.71
LRRC58-201ENST00000295628 BLOC1S2Q6QNY1 142 aa19.5■□□□□ 0.71
LRRC58-201ENST00000295628 CCDC18Q5T9S5 1454 aa19.49■□□□□ 0.71
LRRC58-201ENST00000295628 ZSCAN25Q6NSZ9 544 aa19.49■□□□□ 0.71
LRRC58-201ENST00000295628 RAB3IL1Q8TBN0 382 aa19.49■□□□□ 0.71
LRRC58-201ENST00000295628 SPECC1LQ69YQ0 1117 aa19.49■□□□□ 0.71
LRRC58-201ENST00000295628 SFPQP23246 707 aaKnown RBP eCLIP19.49■□□□□ 0.71
LRRC58-201ENST00000295628 TDRD12Q587J7 1177 aaKnown RBP19.49■□□□□ 0.71
LRRC58-201ENST00000295628 VPS8Q8N3P4 1428 aa19.49■□□□□ 0.71
LRRC58-201ENST00000295628 PAFAH1B1P43034 410 aa19.48■□□□□ 0.71
LRRC58-201ENST00000295628 PSMC4P43686 418 aa19.48■□□□□ 0.71
LRRC58-201ENST00000295628 CLGNO14967 610 aa19.48■□□□□ 0.71
LRRC58-201ENST00000295628 CASTP20810 708 aaKnown RBP19.48■□□□□ 0.71
LRRC58-201ENST00000295628 MNAT1P51948 309 aa19.48■□□□□ 0.71
LRRC58-201ENST00000295628 AACSQ86V21 672 aa19.48■□□□□ 0.71
LRRC58-201ENST00000295628 FBF1Q8TES7 1133 aa19.48■□□□□ 0.71
LRRC58-201ENST00000295628 TOP1P11387 765 aaKnown RBP19.47■□□□□ 0.71
LRRC58-201ENST00000295628 SMG6Q86US8 1419 aaKnown RBP19.47■□□□□ 0.71
LRRC58-201ENST00000295628 CPLX3Q8WVH0 158 aa19.47■□□□□ 0.71
LRRC58-201ENST00000295628 ZHX1Q9UKY1 873 aaPredicted RBP19.47■□□□□ 0.71
LRRC58-201ENST00000295628 CA8P35219 290 aa19.47■□□□□ 0.71
LRRC58-201ENST00000295628 LRP2BPQ9P2M1 347 aa19.47■□□□□ 0.71
LRRC58-201ENST00000295628 IKBKGQ9Y6K9 419 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms