RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 DDB1Q16531 1140 aa30.13■■■□□ 2.41
LINC01116-201ENST00000295549 MIER1Q8N108 512 aa30.13■■■□□ 2.41
LINC01116-201ENST00000295549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.13■■■□□ 2.41
LINC01116-201ENST00000295549 WDR43Q15061 677 aaKnown RBP eCLIP30.12■■■□□ 2.41
LINC01116-201ENST00000295549 RSPH6AQ9H0K4 717 aa30.12■■■□□ 2.41
LINC01116-201ENST00000295549 WNK3Q9BYP7 1800 aa30.11■■■□□ 2.41
LINC01116-201ENST00000295549 ZCRB1Q8TBF4 217 aaKnown RBP30.1■■■□□ 2.41
LINC01116-201ENST00000295549 PNISRQ8TF01 805 aaKnown RBP30.1■■■□□ 2.41
LINC01116-201ENST00000295549 PARP4Q9UKK3 1724 aaKnown RBP30.1■■■□□ 2.41
LINC01116-201ENST00000295549 TNS2Q63HR2 1409 aa30.08■■■□□ 2.41
LINC01116-201ENST00000295549 PDE3BQ13370 1112 aa30.07■■■□□ 2.4
LINC01116-201ENST00000295549 AMOTQ4VCS5 1084 aa30.07■■■□□ 2.4
LINC01116-201ENST00000295549 PNNQ9H307 717 aaKnown RBP30.07■■■□□ 2.4
LINC01116-201ENST00000295549 ADAMTS8Q9UP79 889 aa30.07■■■□□ 2.4
LINC01116-201ENST00000295549 SPG7Q9UQ90 795 aa30.07■■■□□ 2.4
LINC01116-201ENST00000295549 PRKAR2BP31323 418 aa30.06■■■□□ 2.4
LINC01116-201ENST00000295549 KRT27Q7Z3Y8 459 aa30.06■■■□□ 2.4
LINC01116-201ENST00000295549 PLEKHO1Q53GL0 409 aaPredicted RBP30.05■■■□□ 2.4
LINC01116-201ENST00000295549 LRRC37A3O60309 1634 aa30.05■■■□□ 2.4
LINC01116-201ENST00000295549 PLEKHF1Q96S99 279 aa30.04■■■□□ 2.4
LINC01116-201ENST00000295549 PCDH11XQ9BZA7 1347 aa30.02■■■□□ 2.4
LINC01116-201ENST00000295549 PCDH11YQ9BZA8 1340 aa30.02■■■□□ 2.4
LINC01116-201ENST00000295549 MARCH10Q8NA82 808 aaPredicted RBP30.01■■■□□ 2.39
LINC01116-201ENST00000295549 PHACTR3Q96KR7 559 aa30.01■■■□□ 2.39
LINC01116-201ENST00000295549 DDX54Q8TDD1 881 aaKnown RBP30■■■□□ 2.39
LINC01116-201ENST00000295549 CYP27B1O15528 508 aa29.99■■■□□ 2.39
LINC01116-201ENST00000295549 PKD1L3Q7Z443 1732 aa29.99■■■□□ 2.39
LINC01116-201ENST00000295549 NEFMP07197 916 aa29.98■■■□□ 2.39
LINC01116-201ENST00000295549 MTHFSDQ2M296 383 aaKnown RBP29.98■■■□□ 2.39
LINC01116-201ENST00000295549 BRWD3Q6RI45 1802 aa29.97■■■□□ 2.39
LINC01116-201ENST00000295549 IFNL2Q8IZJ0 200 aa29.96■■■□□ 2.39
LINC01116-201ENST00000295549 ZNF530Q6P9A1 599 aaPredicted RBP29.96■■■□□ 2.39
LINC01116-201ENST00000295549 GAS2L2Q8NHY3 880 aa29.96■■■□□ 2.39
LINC01116-201ENST00000295549 PHKG2P15735 406 aa29.95■■■□□ 2.38
LINC01116-201ENST00000295549 RUNDC1Q96C34 613 aa29.95■■■□□ 2.38
LINC01116-201ENST00000295549 BCL9O00512 1426 aa29.94■■■□□ 2.38
LINC01116-201ENST00000295549 NKX1-1Q15270 411 aaPredicted RBP29.94■■■□□ 2.38
LINC01116-201ENST00000295549 ILDR2Q71H61 639 aa29.94■■■□□ 2.38
LINC01116-201ENST00000295549 MAPK8IP3Q9UPT6 1336 aa29.94■■■□□ 2.38
LINC01116-201ENST00000295549 SHANK3Q9BYB0 1731 aa29.93■■■□□ 2.38
LINC01116-201ENST00000295549 FAM182BQ5T319 152 aa29.93■■■□□ 2.38
LINC01116-201ENST00000295549 FAM196AQ6ZSG2 479 aa29.93■■■□□ 2.38
LINC01116-201ENST00000295549 FAM9BQ8IZU0 186 aa29.93■■■□□ 2.38
LINC01116-201ENST00000295549 AKAP4Q5JQC9 854 aa29.92■■■□□ 2.38
LINC01116-201ENST00000295549 C1orf141Q5JVX7 400 aa29.92■■■□□ 2.38
LINC01116-201ENST00000295549 CCDC146Q8IYE0 955 aa29.91■■■□□ 2.38
LINC01116-201ENST00000295549 HSP90AB1P08238 724 aaKnown RBP29.9■■■□□ 2.38
LINC01116-201ENST00000295549 NFE2L2Q16236 605 aa29.88■■■□□ 2.37
LINC01116-201ENST00000295549 DCAF5Q96JK2 942 aa29.87■■■□□ 2.37
LINC01116-201ENST00000295549 EP400Q96L91 3159 aa29.86■■■□□ 2.37
LINC01116-201ENST00000295549 GNAT3A8MTJ3 354 aa29.85■■■□□ 2.37
LINC01116-201ENST00000295549 MAP3K5Q99683 1374 aa29.84■■■□□ 2.37
LINC01116-201ENST00000295549 HTATSF1O43719 755 aaKnown RBP29.83■■■□□ 2.37
LINC01116-201ENST00000295549 TMPOP42166 694 aaKnown RBP29.83■■■□□ 2.37
LINC01116-201ENST00000295549 MPRIPQ6WCQ1 1025 aa29.82■■■□□ 2.36
LINC01116-201ENST00000295549 APAF1O14727 1248 aa29.81■■■□□ 2.36
LINC01116-201ENST00000295549 KDM6AO15550 1401 aaPredicted RBP29.8■■■□□ 2.36
LINC01116-201ENST00000295549 ERVV-2B6SEH9 535 aa29.79■■■□□ 2.36
LINC01116-201ENST00000295549 RIPK4P57078 832 aa29.79■■■□□ 2.36
LINC01116-201ENST00000295549 RTF1Q92541 710 aaKnown RBP29.79■■■□□ 2.36
LINC01116-201ENST00000295549 RNMTO43148 476 aaKnown RBP29.78■■■□□ 2.36
LINC01116-201ENST00000295549 IL17REQ8NFR9 667 aa29.78■■■□□ 2.36
LINC01116-201ENST00000295549 ACSBG1Q96GR2 724 aa29.78■■■□□ 2.36
LINC01116-201ENST00000295549 LGR6Q9HBX8 967 aa29.78■■■□□ 2.36
LINC01116-201ENST00000295549 PRIM1P49642 420 aaKnown RBP29.77■■■□□ 2.36
LINC01116-201ENST00000295549 BCL11BQ9C0K0 894 aaPredicted RBP29.77■■■□□ 2.36
LINC01116-201ENST00000295549 RRP7AQ9Y3A4 280 aaKnown RBP29.77■■■□□ 2.36
LINC01116-201ENST00000295549 KCNQ2O43526 872 aa29.76■■■□□ 2.35
LINC01116-201ENST00000295549 CEMIPQ8WUJ3 1361 aa29.75■■■□□ 2.35
LINC01116-201ENST00000295549 TRIM37O94972 964 aa29.75■■■□□ 2.35
LINC01116-201ENST00000295549 LMOD3Q0VAK6 560 aa29.75■■■□□ 2.35
LINC01116-201ENST00000295549 NCBP3Q53F19 620 aaKnown RBP29.75■■■□□ 2.35
LINC01116-201ENST00000295549 NEUROD2Q15784 382 aa29.74■■■□□ 2.35
LINC01116-201ENST00000295549 SYTL4Q96C24 671 aaPredicted RBP29.73■■■□□ 2.35
LINC01116-201ENST00000295549 ADAMTS7Q9UKP4 1686 aa29.73■■■□□ 2.35
LINC01116-201ENST00000295549 CCDC125Q86Z20 511 aa29.72■■■□□ 2.35
LINC01116-201ENST00000295549 CABP4P57796 275 aa29.71■■■□□ 2.35
LINC01116-201ENST00000295549 MCM10Q7L590 875 aa29.71■■■□□ 2.35
LINC01116-201ENST00000295549 TRIM35Q9UPQ4 493 aa29.71■■■□□ 2.35
LINC01116-201ENST00000295549 PTF1AQ7RTS3 328 aa29.71■■■□□ 2.35
LINC01116-201ENST00000295549 SLC52A2Q9HAB3 445 aa29.71■■■□□ 2.35
LINC01116-201ENST00000295549 TMOD3Q9NYL9 352 aa29.71■■■□□ 2.35
LINC01116-201ENST00000295549 TOGARAM1Q9Y4F4 1720 aa29.7■■■□□ 2.35
LINC01116-201ENST00000295549 SBF2Q86WG5 1849 aa29.7■■■□□ 2.34
LINC01116-201ENST00000295549 DCTN1Q14203 1278 aa29.7■■■□□ 2.34
LINC01116-201ENST00000295549 NGEFQ8N5V2 710 aa29.7■■■□□ 2.34
LINC01116-201ENST00000295549 PIGBQ92521 554 aa29.7■■■□□ 2.34
LINC01116-201ENST00000295549 NHSQ6T4R5 1651 aa29.69■■■□□ 2.34
LINC01116-201ENST00000295549 CCDC27Q2M243 656 aa29.69■■■□□ 2.34
LINC01116-201ENST00000295549 NFATC2IPQ8NCF5 419 aa29.69■■■□□ 2.34
LINC01116-201ENST00000295549 DOT1LQ8TEK3 1739 aa29.69■■■□□ 2.34
LINC01116-201ENST00000295549 SCN11AQ9UI33 1791 aa29.68■■■□□ 2.34
LINC01116-201ENST00000295549 MRC1P22897 1456 aa29.68■■■□□ 2.34
LINC01116-201ENST00000295549 TEFQ10587 303 aa29.67■■■□□ 2.34
LINC01116-201ENST00000295549 UPF1Q92900 1129 aaKnown RBP eCLIP29.67■■■□□ 2.34
LINC01116-201ENST00000295549 DLG5Q8TDM6 1919 aa29.66■■■□□ 2.34
LINC01116-201ENST00000295549 KAT6BQ8WYB5 2073 aa29.65■■■□□ 2.34
LINC01116-201ENST00000295549 SF3B2Q13435 895 aaKnown RBP29.63■■■□□ 2.33
LINC01116-201ENST00000295549 THUMPD2Q9BTF0 503 aaKnown RBP29.63■■■□□ 2.33
LINC01116-201ENST00000295549 APBA3O96018 575 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms