RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 KIAA0556O60303 1618 aa17.42■□□□□ 0.38
SEC16A-202ENST00000290037 HMG20BQ9P0W2 317 aa17.42■□□□□ 0.38
SEC16A-202ENST00000290037 PPFIBP1Q86W92 1011 aa17.42■□□□□ 0.38
SEC16A-202ENST00000290037 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
SEC16A-202ENST00000290037 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
SEC16A-202ENST00000290037 GSDMDP57764 484 aa17.41■□□□□ 0.38
SEC16A-202ENST00000290037 SYCP1Q15431 976 aa17.41■□□□□ 0.38
SEC16A-202ENST00000290037 IMMTQ16891 758 aaKnown RBP17.41■□□□□ 0.38
SEC16A-202ENST00000290037 TRAF1Q13077 416 aa17.41■□□□□ 0.38
SEC16A-202ENST00000290037 ZNF518AQ6AHZ1 1483 aa17.41■□□□□ 0.38
SEC16A-202ENST00000290037 PPP1R12BO60237 982 aaPredicted RBP17.41■□□□□ 0.38
SEC16A-202ENST00000290037 FMNL3Q8IVF7 1028 aa17.41■□□□□ 0.38
SEC16A-202ENST00000290037 CDK13Q14004 1512 aaKnown RBP17.41■□□□□ 0.38
SEC16A-202ENST00000290037 TULP1O00294 542 aaPredicted RBP17.4■□□□□ 0.38
SEC16A-202ENST00000290037 BMP15O95972 392 aa17.4■□□□□ 0.38
SEC16A-202ENST00000290037 NSD3Q9BZ95 1437 aa17.4■□□□□ 0.38
SEC16A-202ENST00000290037 STK38Q15208 465 aa17.4■□□□□ 0.38
SEC16A-202ENST00000290037 KIF1BPQ96EK5 621 aa17.4■□□□□ 0.38
SEC16A-202ENST00000290037 RAB34Q9BZG1 259 aa17.4■□□□□ 0.38
SEC16A-202ENST00000290037 CCAR2Q8N163 923 aaKnown RBP17.4■□□□□ 0.38
SEC16A-202ENST00000290037 ZNF397Q8NF99 534 aaPredicted RBP17.4■□□□□ 0.38
SEC16A-202ENST00000290037 LNPKQ9C0E8 428 aa17.4■□□□□ 0.38
SEC16A-202ENST00000290037 TUBBP07437 444 aa17.39■□□□□ 0.37
SEC16A-202ENST00000290037 CCDC178Q5BJE1 867 aa17.39■□□□□ 0.37
SEC16A-202ENST00000290037 MAST1Q9Y2H9 1570 aa17.39■□□□□ 0.37
SEC16A-202ENST00000290037 CCDC61Q9Y6R9 512 aa17.39■□□□□ 0.37
SEC16A-202ENST00000290037 PPIP5K1Q6PFW1 1433 aa17.39■□□□□ 0.37
SEC16A-202ENST00000290037 UVSSAQ2YD98 709 aa17.39■□□□□ 0.37
SEC16A-202ENST00000290037 KANK3Q6NY19 840 aa17.39■□□□□ 0.37
SEC16A-202ENST00000290037 SLF2Q8IX21 1173 aa17.39■□□□□ 0.37
SEC16A-202ENST00000290037 TEX13AQ9BXU3 409 aaPredicted RBP17.38■□□□□ 0.37
SEC16A-202ENST00000290037 EHBP1Q8NDI1 1231 aa17.38■□□□□ 0.37
SEC16A-202ENST00000290037 ZMYM4Q5VZL5 1548 aa17.38■□□□□ 0.37
SEC16A-202ENST00000290037 SLFN5Q08AF3 891 aa17.38■□□□□ 0.37
SEC16A-202ENST00000290037 ZNF652Q9Y2D9 606 aa17.38■□□□□ 0.37
SEC16A-202ENST00000290037 TNMDQ9H2S6 317 aa17.38■□□□□ 0.37
SEC16A-202ENST00000290037 NEK4P51957 841 aa17.38■□□□□ 0.37
SEC16A-202ENST00000290037 HS1BP3Q53T59 392 aa17.37■□□□□ 0.37
SEC16A-202ENST00000290037 LRRC27Q9C0I9 530 aa17.37■□□□□ 0.37
SEC16A-202ENST00000290037 CCDC9Q9Y3X0 531 aaKnown RBP17.37■□□□□ 0.37
SEC16A-202ENST00000290037 PRKAR2BP31323 418 aa17.37■□□□□ 0.37
SEC16A-202ENST00000290037 CETN2P41208 172 aa17.37■□□□□ 0.37
SEC16A-202ENST00000290037 ANAPC15P60006 121 aa17.37■□□□□ 0.37
SEC16A-202ENST00000290037 PLEKHG5O94827 1062 aa17.37■□□□□ 0.37
SEC16A-202ENST00000290037 HDGFL1Q5TGJ6 251 aa17.37■□□□□ 0.37
SEC16A-202ENST00000290037 BLOC1S2Q6QNY1 142 aa17.37■□□□□ 0.37
SEC16A-202ENST00000290037 CCDC112Q8NEF3 446 aa17.37■□□□□ 0.37
SEC16A-202ENST00000290037 SURF6O75683 361 aaKnown RBP17.37■□□□□ 0.37
SEC16A-202ENST00000290037 ARHGEF11O15085 1522 aa17.36■□□□□ 0.37
SEC16A-202ENST00000290037 PIK3C2GO75747 1445 aa17.36■□□□□ 0.37
SEC16A-202ENST00000290037 NLRP6P59044 892 aa17.36■□□□□ 0.37
SEC16A-202ENST00000290037 VPS36Q86VN1 386 aa17.36■□□□□ 0.37
SEC16A-202ENST00000290037 RNF41Q9H4P4 317 aaPredicted RBP17.36■□□□□ 0.37
SEC16A-202ENST00000290037 WDR62O43379 1518 aa17.36■□□□□ 0.37
SEC16A-202ENST00000290037 FAM69CQ0P6D2 419 aa17.35■□□□□ 0.37
SEC16A-202ENST00000290037 LTV1Q96GA3 475 aaPredicted RBP17.35■□□□□ 0.37
SEC16A-202ENST00000290037 KDM5BQ9UGL1 1544 aa17.35■□□□□ 0.37
SEC16A-202ENST00000290037 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
SEC16A-202ENST00000290037 POTEJP0CG39 1038 aa17.35■□□□□ 0.37
SEC16A-202ENST00000290037 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
SEC16A-202ENST00000290037 CREBRFQ8IUR6 639 aa17.35■□□□□ 0.37
SEC16A-202ENST00000290037 KIAA0754O94854 1291 aa17.35■□□□□ 0.37
SEC16A-202ENST00000290037 HYPKQ9NX55 129 aa17.35■□□□□ 0.37
SEC16A-202ENST00000290037 ZSCAN30Q86W11 494 aa17.35■□□□□ 0.37
SEC16A-202ENST00000290037 TTC21AQ8NDW8 1320 aa17.35■□□□□ 0.37
SEC16A-202ENST00000290037 EZRP15311 586 aaKnown RBP17.34■□□□□ 0.37
SEC16A-202ENST00000290037 WASHC4Q2M389 1173 aa17.34■□□□□ 0.37
SEC16A-202ENST00000290037 CCDC183Q5T5S1 534 aa17.34■□□□□ 0.37
SEC16A-202ENST00000290037 ABTB2Q8N961 1025 aa17.34■□□□□ 0.37
SEC16A-202ENST00000290037 BMP2KLQ5H9B9 411 aa17.34■□□□□ 0.37
SEC16A-202ENST00000290037 LARP1Q6PKG0 1096 aaKnown RBP17.34■□□□□ 0.37
SEC16A-202ENST00000290037 PDZRN3Q9UPQ7 1066 aa17.34■□□□□ 0.37
SEC16A-202ENST00000290037 FEZ1Q99689 392 aa17.34■□□□□ 0.37
SEC16A-202ENST00000290037 CCDC12Q8WUD4 166 aaPredicted RBP17.34■□□□□ 0.37
SEC16A-202ENST00000290037 TTF1Q15361 905 aaPredicted RBP17.33■□□□□ 0.37
SEC16A-202ENST00000290037 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.37
SEC16A-202ENST00000290037 GRPEL1Q9HAV7 217 aa17.33■□□□□ 0.36
SEC16A-202ENST00000290037 ABCC10Q5T3U5 1492 aa17.33■□□□□ 0.36
SEC16A-202ENST00000290037 SHROOM2Q13796 1616 aa17.33■□□□□ 0.36
SEC16A-202ENST00000290037 PLIN1O60240 522 aa17.33■□□□□ 0.36
SEC16A-202ENST00000290037 MAP3K11Q16584 847 aa17.33■□□□□ 0.36
SEC16A-202ENST00000290037 ANKLE2Q86XL3 938 aa17.33■□□□□ 0.36
SEC16A-202ENST00000290037 FANCAO15360 1455 aa17.33■□□□□ 0.36
SEC16A-202ENST00000290037 ARHGEF5Q12774 1597 aa17.33■□□□□ 0.36
SEC16A-202ENST00000290037 DDX19AQ9NUU7 478 aaKnown RBP17.33■□□□□ 0.36
SEC16A-202ENST00000290037 GNAT3A8MTJ3 354 aa17.33■□□□□ 0.36
SEC16A-202ENST00000290037 BCL2L13Q9BXK5 485 aa17.33■□□□□ 0.36
SEC16A-202ENST00000290037 ZNF592Q92610 1267 aa17.32■□□□□ 0.36
SEC16A-202ENST00000290037 TTC39AQ5SRH9 613 aa17.32■□□□□ 0.36
SEC16A-202ENST00000290037 HOOK3Q86VS8 718 aa17.32■□□□□ 0.36
SEC16A-202ENST00000290037 ATL3Q6DD88 541 aa17.32■□□□□ 0.36
SEC16A-202ENST00000290037 NOL8Q76FK4 1167 aaKnown RBP17.32■□□□□ 0.36
SEC16A-202ENST00000290037 CCDC69A6NI79 296 aa17.32■□□□□ 0.36
SEC16A-202ENST00000290037 EPB41L2O43491 1005 aaKnown RBP17.32■□□□□ 0.36
SEC16A-202ENST00000290037 ANO10Q9NW15 660 aa17.32■□□□□ 0.36
SEC16A-202ENST00000290037 RBM27Q9P2N5 1060 aaKnown RBP17.32■□□□□ 0.36
SEC16A-202ENST00000290037 CD109Q6YHK3 1445 aa17.32■□□□□ 0.36
SEC16A-202ENST00000290037 NUP62CLQ9H1M0 184 aa17.32■□□□□ 0.36
SEC16A-202ENST00000290037 CCDC148Q8NFR7 591 aa17.32■□□□□ 0.36
SEC16A-202ENST00000290037 JAKMIP3Q5VZ66 844 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 840.9 ms