RNA–Protein interactions for RNA: ENST00000287820.10

PPARG-201, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPARG, Length 1,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-201ENST00000287820 RAPGEF4Q8WZA2 1011 aa11.46□□□□□ -0.57
PPARG-201ENST00000287820 TNS2Q63HR2 1409 aa11.46□□□□□ -0.57
PPARG-201ENST00000287820 RGPD1P0DJD0 1748 aa11.46□□□□□ -0.57
PPARG-201ENST00000287820 PLSCR1O15162 318 aa11.46□□□□□ -0.58
PPARG-201ENST00000287820 MTHFSP49914 203 aa11.46□□□□□ -0.58
PPARG-201ENST00000287820 TATP17735 454 aaPredicted RBP11.45□□□□□ -0.58
PPARG-201ENST00000287820 EZH2Q15910 746 aaKnown RBP11.45□□□□□ -0.58
PPARG-201ENST00000287820 SRCAPQ6ZRS2 3230 aa11.45□□□□□ -0.58
PPARG-201ENST00000287820 KCNQ2O43526 872 aa11.44□□□□□ -0.58
PPARG-201ENST00000287820 NCAPD2Q15021 1401 aa11.44□□□□□ -0.58
PPARG-201ENST00000287820 MEGF6O75095 1541 aa11.44□□□□□ -0.58
PPARG-201ENST00000287820 TNS1Q9HBL0 1735 aaKnown RBP11.43□□□□□ -0.58
PPARG-201ENST00000287820 IL13P35225 146 aa11.43□□□□□ -0.58
PPARG-201ENST00000287820 CNGB1Q14028 1251 aaPredicted RBP11.42□□□□□ -0.58
PPARG-201ENST00000287820 ACSBG1Q96GR2 724 aa11.42□□□□□ -0.58
PPARG-201ENST00000287820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.588e-10■□□□□ 8.2
PPARG-201ENST00000287820 IGSF1Q8N6C5 1336 aa11.42□□□□□ -0.58
PPARG-201ENST00000287820 PROM2Q8N271 834 aa11.42□□□□□ -0.58
PPARG-201ENST00000287820 PARD3Q8TEW0 1356 aa11.41□□□□□ -0.58
PPARG-201ENST00000287820 CYP27B1O15528 508 aa11.41□□□□□ -0.58
PPARG-201ENST00000287820 PRIM1P49642 420 aaKnown RBP11.4□□□□□ -0.58
PPARG-201ENST00000287820 SPG7Q9UQ90 795 aa11.4□□□□□ -0.58
PPARG-201ENST00000287820 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.59
PPARG-201ENST00000287820 SHANK3Q9BYB0 1731 aa11.39□□□□□ -0.59
PPARG-201ENST00000287820 PCDH11XQ9BZA7 1347 aa11.39□□□□□ -0.59
PPARG-201ENST00000287820 PCDH11YQ9BZA8 1340 aa11.39□□□□□ -0.59
PPARG-201ENST00000287820 DDX10Q13206 875 aaKnown RBP11.39□□□□□ -0.59
PPARG-201ENST00000287820 DIAPH1O60610 1272 aaKnown RBP11.38□□□□□ -0.59
PPARG-201ENST00000287820 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
PPARG-201ENST00000287820 TXNRD1Q16881 649 aa11.38□□□□□ -0.59
PPARG-201ENST00000287820 AEBP1Q8IUX7 1158 aa11.38□□□□□ -0.59
PPARG-201ENST00000287820 IFNL2Q8IZJ0 200 aa11.38□□□□□ -0.59
PPARG-201ENST00000287820 PLEKHG2Q9H7P9 1386 aa11.38□□□□□ -0.59
PPARG-201ENST00000287820 PPP2R1AP30153 589 aa11.37□□□□□ -0.59
PPARG-201ENST00000287820 AMOTQ4VCS5 1084 aa11.37□□□□□ -0.59
PPARG-201ENST00000287820 PLEKHO1Q53GL0 409 aaPredicted RBP11.37□□□□□ -0.59
PPARG-201ENST00000287820 PHKG2P15735 406 aa11.36□□□□□ -0.59
PPARG-201ENST00000287820 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
PPARG-201ENST00000287820 SYTL4Q96C24 671 aaPredicted RBP11.36□□□□□ -0.59
PPARG-201ENST00000287820 KDRP35968 1356 aa11.36□□□□□ -0.59
PPARG-201ENST00000287820 NHSQ6T4R5 1651 aa11.36□□□□□ -0.59
PPARG-201ENST00000287820 PKD1L3Q7Z443 1732 aa11.35□□□□□ -0.59
PPARG-201ENST00000287820 R3HDM1Q15032 1099 aaKnown RBP11.35□□□□□ -0.59
PPARG-201ENST00000287820 BTAF1O14981 1849 aa11.34□□□□□ -0.59
PPARG-201ENST00000287820 PSDA5PKW4 1024 aaPredicted RBP11.34□□□□□ -0.59
PPARG-201ENST00000287820 HMOX1P09601 288 aa11.34□□□□□ -0.59
PPARG-201ENST00000287820 RGPD3A6NKT7 1758 aaPredicted RBP11.34□□□□□ -0.59
PPARG-201ENST00000287820 RGPD4Q7Z3J3 1758 aa11.34□□□□□ -0.59
PPARG-201ENST00000287820 RREB1Q92766 1687 aa11.34□□□□□ -0.59
PPARG-201ENST00000287820 MPRIPQ6WCQ1 1025 aa11.34□□□□□ -0.59
PPARG-201ENST00000287820 CFAP53Q96M91 514 aa11.34□□□□□ -0.59
PPARG-201ENST00000287820 LRRC4BQ9NT99 713 aa11.34□□□□□ -0.59
PPARG-201ENST00000287820 PIGBQ92521 554 aa11.33□□□□□ -0.6
PPARG-201ENST00000287820 HSP90AB1P08238 724 aaKnown RBP11.32□□□□□ -0.6
PPARG-201ENST00000287820 SLC27A3Q5K4L6 730 aa11.32□□□□□ -0.6
PPARG-201ENST00000287820 ZNF530Q6P9A1 599 aaPredicted RBP11.32□□□□□ -0.6
PPARG-201ENST00000287820 DCAF5Q96JK2 942 aa11.32□□□□□ -0.6
PPARG-201ENST00000287820 COL3A1P02461 1466 aaPredicted RBP11.32□□□□□ -0.6
PPARG-201ENST00000287820 NUP188Q5SRE5 1749 aa11.32□□□□□ -0.6
PPARG-201ENST00000287820 ITGB4P16144 1822 aa11.32□□□□□ -0.6
PPARG-201ENST00000287820 ERVV-2B6SEH9 535 aa11.32□□□□□ -0.6
PPARG-201ENST00000287820 U2SURPO15042 1029 aaKnown RBP11.32□□□□□ -0.6
PPARG-201ENST00000287820 RALBP1Q15311 655 aa11.32□□□□□ -0.6
PPARG-201ENST00000287820 DOT1LQ8TEK3 1739 aa11.31□□□□□ -0.6
PPARG-201ENST00000287820 ANO8Q9HCE9 1232 aaPredicted RBP11.31□□□□□ -0.6
PPARG-201ENST00000287820 NUDCQ9Y266 331 aa11.31□□□□□ -0.6
PPARG-201ENST00000287820 SLC15A2Q16348 729 aa11.3□□□□□ -0.6
PPARG-201ENST00000287820 MTHFSDQ2M296 383 aaKnown RBP11.3□□□□□ -0.6
PPARG-201ENST00000287820 C1orf141Q5JVX7 400 aa11.3□□□□□ -0.6
PPARG-201ENST00000287820 KCNQ4P56696 695 aa11.29□□□□□ -0.6
PPARG-201ENST00000287820 AKAP4Q5JQC9 854 aa11.29□□□□□ -0.6
PPARG-201ENST00000287820 SMARCC1Q92922 1105 aaPredicted RBP11.29□□□□□ -0.6
PPARG-201ENST00000287820 TMOD3Q9NYL9 352 aa11.29□□□□□ -0.6
PPARG-201ENST00000287820 ZNF316A6NFI3 1004 aaPredicted RBP11.29□□□□□ -0.6
PPARG-201ENST00000287820 FCHSD2O94868 740 aa11.29□□□□□ -0.6
PPARG-201ENST00000287820 STK32BQ9NY57 414 aa11.29□□□□□ -0.6
PPARG-201ENST00000287820 ASAP1Q9ULH1 1129 aa11.29□□□□□ -0.6
PPARG-201ENST00000287820 TOGARAM1Q9Y4F4 1720 aa11.28□□□□□ -0.6
PPARG-201ENST00000287820 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
PPARG-201ENST00000287820 LGR6Q9HBX8 967 aa11.28□□□□□ -0.6
PPARG-201ENST00000287820 LY75O60449 1722 aa11.28□□□□□ -0.6
PPARG-201ENST00000287820 U2AF1L5P0DN76 240 aaPredicted RBP11.27□□□□□ -0.6
PPARG-201ENST00000287820 U2AF1Q01081 240 aaKnown RBP eCLIP11.27□□□□□ -0.6
PPARG-201ENST00000287820 NFATC2IPQ8NCF5 419 aa11.27□□□□□ -0.6
PPARG-201ENST00000287820 PHACTR3Q96KR7 559 aa11.27□□□□□ -0.6
PPARG-201ENST00000287820 RSPH6AQ9H0K4 717 aa11.27□□□□□ -0.6
PPARG-201ENST00000287820 ATG3Q9NT62 314 aa11.27□□□□□ -0.6
PPARG-201ENST00000287820 CCNL1Q9UK58 526 aaPredicted RBP11.27□□□□□ -0.6
PPARG-201ENST00000287820 HMGB2P26583 209 aaKnown RBP11.27□□□□□ -0.61
PPARG-201ENST00000287820 CABP4P57796 275 aa11.27□□□□□ -0.61
PPARG-201ENST00000287820 PDGFDQ9GZP0 370 aaPredicted RBP11.27□□□□□ -0.61
PPARG-201ENST00000287820 KDM6AO15550 1401 aaPredicted RBP11.26□□□□□ -0.61
PPARG-201ENST00000287820 PALLDQ8WX93 1383 aa11.26□□□□□ -0.61
PPARG-201ENST00000287820 RNMTO43148 476 aaKnown RBP11.26□□□□□ -0.61
PPARG-201ENST00000287820 PRKAR2BP31323 418 aa11.26□□□□□ -0.61
PPARG-201ENST00000287820 ZNF827Q17R98 1081 aa11.26□□□□□ -0.61
PPARG-201ENST00000287820 LOC102724428A0A0B4J2F2 783 aa11.25□□□□□ -0.61
PPARG-201ENST00000287820 SIK1P57059 783 aa11.25□□□□□ -0.61
PPARG-201ENST00000287820 PRKRIP1Q9H875 184 aaPredicted RBP11.25□□□□□ -0.61
PPARG-201ENST00000287820 IL17REQ8NFR9 667 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms