RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 NFE2L2Q16236 605 aa17.13■□□□□ 0.33
LPCAT1-201ENST00000283415 MRPL50Q8N5N7 158 aaKnown RBP17.13■□□□□ 0.33
LPCAT1-201ENST00000283415 PRR36Q9H6K5 1346 aa17.13■□□□□ 0.33
LPCAT1-201ENST00000283415 TRIM6-TRIM34B2RNG4 842 aa17.13■□□□□ 0.33
LPCAT1-201ENST00000283415 FAM208AQ9UK61 1670 aaKnown RBP17.12■□□□□ 0.33
LPCAT1-201ENST00000283415 ZBTB7BO15156 539 aaPredicted RBP17.12■□□□□ 0.33
LPCAT1-201ENST00000283415 TMEM2Q9UHN6 1383 aa17.12■□□□□ 0.33
LPCAT1-201ENST00000283415 IFT57Q9NWB7 429 aa17.12■□□□□ 0.33
LPCAT1-201ENST00000283415 MCM10Q7L590 875 aa17.12■□□□□ 0.33
LPCAT1-201ENST00000283415 ROBO2Q9HCK4 1378 aa17.11■□□□□ 0.33
LPCAT1-201ENST00000283415 PTPRUQ92729 1446 aa17.11■□□□□ 0.33
LPCAT1-201ENST00000283415 HDGFP51858 240 aaKnown RBP17.11■□□□□ 0.33
LPCAT1-201ENST00000283415 ZNF692Q9BU19 519 aaPredicted RBP17.11■□□□□ 0.33
LPCAT1-201ENST00000283415 NWD1Q149M9 1564 aa17.11■□□□□ 0.33
LPCAT1-201ENST00000283415 PLEKHG1Q9ULL1 1385 aa17.1■□□□□ 0.33
LPCAT1-201ENST00000283415 TWISTNBQ3B726 338 aaPredicted RBP17.1■□□□□ 0.33
LPCAT1-201ENST00000283415 TBC1D2Q9BYX2 928 aa17.1■□□□□ 0.33
LPCAT1-201ENST00000283415 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
LPCAT1-201ENST00000283415 RBM25P49756 843 aaKnown RBP17.09■□□□□ 0.33
LPCAT1-201ENST00000283415 KRT24Q2M2I5 525 aa17.09■□□□□ 0.33
LPCAT1-201ENST00000283415 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.09■□□□□ 0.33
LPCAT1-201ENST00000283415 RILPL2Q969X0 211 aa17.09■□□□□ 0.33
LPCAT1-201ENST00000283415 SIRT2Q8IXJ6 389 aa17.08■□□□□ 0.32
LPCAT1-201ENST00000283415 PHRF1Q9P1Y6 1649 aaKnown RBP17.08■□□□□ 0.32
LPCAT1-201ENST00000283415 ATP10DQ9P241 1426 aa17.07■□□□□ 0.32
LPCAT1-201ENST00000283415 STK31Q9BXU1 1019 aa17.07■□□□□ 0.32
LPCAT1-201ENST00000283415 USP6P35125 1406 aa17.07■□□□□ 0.32
LPCAT1-201ENST00000283415 CRB1P82279 1406 aa17.07■□□□□ 0.32
LPCAT1-201ENST00000283415 NLRP6P59044 892 aa17.07■□□□□ 0.32
LPCAT1-201ENST00000283415 EID1Q9Y6B2 187 aa17.07■□□□□ 0.32
LPCAT1-201ENST00000283415 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
LPCAT1-201ENST00000283415 PTMAP06454 111 aaKnown RBP17.06■□□□□ 0.32
LPCAT1-201ENST00000283415 CALD1Q05682 793 aaKnown RBP17.06■□□□□ 0.32
LPCAT1-201ENST00000283415 CASC1Q6TDU7 716 aa17.06■□□□□ 0.32
LPCAT1-201ENST00000283415 PRKCSHP14314 528 aaPredicted RBP17.06■□□□□ 0.32
LPCAT1-201ENST00000283415 NUDT16Q96DE0 195 aaKnown RBP17.06■□□□□ 0.32
LPCAT1-201ENST00000283415 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
LPCAT1-201ENST00000283415 CACNA1FO60840 1977 aa17.05■□□□□ 0.32
LPCAT1-201ENST00000283415 TNRQ92752 1358 aa17.05■□□□□ 0.32
LPCAT1-201ENST00000283415 TSPYL6Q8N831 410 aa17.05■□□□□ 0.32
LPCAT1-201ENST00000283415 KIF2CQ99661 725 aa17.05■□□□□ 0.32
LPCAT1-201ENST00000283415 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
LPCAT1-201ENST00000283415 PLEKHG3A1L390 1219 aa17.05■□□□□ 0.32
LPCAT1-201ENST00000283415 FKBP5Q13451 457 aaPredicted RBP17.05■□□□□ 0.32
LPCAT1-201ENST00000283415 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
LPCAT1-201ENST00000283415 TSPYL4Q9UJ04 414 aa17.05■□□□□ 0.32
LPCAT1-201ENST00000283415 GLIPR1L2Q4G1C9 344 aa17.04■□□□□ 0.32
LPCAT1-201ENST00000283415 GNAI1P63096 354 aa17.04■□□□□ 0.32
LPCAT1-201ENST00000283415 SMARCA5O60264 1052 aaPredicted RBP17.04■□□□□ 0.32
LPCAT1-201ENST00000283415 AEBP1Q8IUX7 1158 aa17.04■□□□□ 0.32
LPCAT1-201ENST00000283415 KIAA0232Q92628 1395 aa17.03■□□□□ 0.32
LPCAT1-201ENST00000283415 TRAK2O60296 914 aa17.03■□□□□ 0.32
LPCAT1-201ENST00000283415 KDRP35968 1356 aa17.03■□□□□ 0.32
LPCAT1-201ENST00000283415 CCDC61Q9Y6R9 512 aa17.03■□□□□ 0.32
LPCAT1-201ENST00000283415 DNTTIP2Q5QJE6 756 aaKnown RBP17.03■□□□□ 0.32
LPCAT1-201ENST00000283415 F6X3S4 739 aa17.02■□□□□ 0.32
LPCAT1-201ENST00000283415 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
LPCAT1-201ENST00000283415 GBP4Q96PP9 640 aa17.02■□□□□ 0.32
LPCAT1-201ENST00000283415 CHMP5Q9NZZ3 219 aa17.02■□□□□ 0.32
LPCAT1-201ENST00000283415 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.31
LPCAT1-201ENST00000283415 DDX49Q9Y6V7 483 aaKnown RBP17.02■□□□□ 0.31
LPCAT1-201ENST00000283415 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.31
LPCAT1-201ENST00000283415 FER1L4A9Z1Z3 1794 aa17.01■□□□□ 0.31
LPCAT1-201ENST00000283415 HAP1P54257 671 aaPredicted RBP17.01■□□□□ 0.31
LPCAT1-201ENST00000283415 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
LPCAT1-201ENST00000283415 SNX21Q969T3 373 aa17.01■□□□□ 0.31
LPCAT1-201ENST00000283415 KCNJ4P48050 445 aa17.01■□□□□ 0.31
LPCAT1-201ENST00000283415 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
LPCAT1-201ENST00000283415 CHD1LQ86WJ1 897 aa17■□□□□ 0.31
LPCAT1-201ENST00000283415 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
LPCAT1-201ENST00000283415 TSHZ3Q63HK5 1081 aa16.99■□□□□ 0.31
LPCAT1-201ENST00000283415 GCC1Q96CN9 775 aa16.99■□□□□ 0.31
LPCAT1-201ENST00000283415 PANK2Q9BZ23 570 aa16.99■□□□□ 0.31
LPCAT1-201ENST00000283415 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
LPCAT1-201ENST00000283415 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
LPCAT1-201ENST00000283415 CEP170BQ9Y4F5 1589 aaPredicted RBP16.98■□□□□ 0.31
LPCAT1-201ENST00000283415 INTS3Q68E01 1043 aaKnown RBP16.98■□□□□ 0.31
LPCAT1-201ENST00000283415 KDM3BQ7LBC6 1761 aa16.98■□□□□ 0.31
LPCAT1-201ENST00000283415 CHL1O00533 1208 aa16.97■□□□□ 0.31
LPCAT1-201ENST00000283415 HSP90AB2PQ58FF8 381 aa16.97■□□□□ 0.31
LPCAT1-201ENST00000283415 CRYBG1Q9Y4K1 1723 aa16.97■□□□□ 0.31
LPCAT1-201ENST00000283415 MPNDQ8N594 471 aa16.97■□□□□ 0.31
LPCAT1-201ENST00000283415 NAP1L2Q9ULW6 460 aaPredicted RBP16.97■□□□□ 0.31
LPCAT1-201ENST00000283415 CHD2O14647 1828 aaKnown RBP16.97■□□□□ 0.31
LPCAT1-201ENST00000283415 TTC21BQ7Z4L5 1316 aa16.97■□□□□ 0.31
LPCAT1-201ENST00000283415 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
LPCAT1-201ENST00000283415 MAP4K4O95819 1239 aaPredicted RBP16.96■□□□□ 0.31
LPCAT1-201ENST00000283415 CSB-PGBD3P0DP91 1061 aa16.96■□□□□ 0.31
LPCAT1-201ENST00000283415 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
LPCAT1-201ENST00000283415 MSNP26038 577 aaKnown RBP16.96■□□□□ 0.31
LPCAT1-201ENST00000283415 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
LPCAT1-201ENST00000283415 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
LPCAT1-201ENST00000283415 MCM4P33991 863 aa16.96■□□□□ 0.31
LPCAT1-201ENST00000283415 LTN1O94822 1766 aa16.96■□□□□ 0.3
LPCAT1-201ENST00000283415 API5Q9BZZ5 524 aaKnown RBP16.96■□□□□ 0.3
LPCAT1-201ENST00000283415 RTL1A6NKG5 1358 aa16.95■□□□□ 0.3
LPCAT1-201ENST00000283415 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
LPCAT1-201ENST00000283415 EXOC6BQ9Y2D4 811 aa16.95■□□□□ 0.3
LPCAT1-201ENST00000283415 FSD2A1L4K1 749 aa16.95■□□□□ 0.3
LPCAT1-201ENST00000283415 AIMP1Q12904 312 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms