RNA–Protein interactions for RNA: ENST00000275080.11

CD164-201, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-201ENST00000275080 SLC26A8Q96RN1 970 aa11.24□□□□□ -0.61
CD164-201ENST00000275080 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
CD164-201ENST00000275080 XPCQ01831 940 aaPredicted RBP11.24□□□□□ -0.61
CD164-201ENST00000275080 ESF1Q9H501 851 aaKnown RBP11.24□□□□□ -0.61
CD164-201ENST00000275080 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
CD164-201ENST00000275080 MSNP26038 577 aaKnown RBP11.23□□□□□ -0.61
CD164-201ENST00000275080 API5Q9BZZ5 524 aaKnown RBP11.23□□□□□ -0.61
CD164-201ENST00000275080 EIF2S2P20042 333 aaKnown RBP11.22□□□□□ -0.61
CD164-201ENST00000275080 FKBP5Q13451 457 aaPredicted RBP11.22□□□□□ -0.61
CD164-201ENST00000275080 TTC22Q5TAA0 569 aa11.22□□□□□ -0.61
CD164-201ENST00000275080 SNX21Q969T3 373 aa11.22□□□□□ -0.61
CD164-201ENST00000275080 IFT57Q9NWB7 429 aa11.22□□□□□ -0.61
CD164-201ENST00000275080 FAM13BQ9NYF5 915 aa11.22□□□□□ -0.61
CD164-201ENST00000275080 TSPYL4Q9UJ04 414 aa11.22□□□□□ -0.61
CD164-201ENST00000275080 R3HCC1Q9Y3T6 440 aaKnown RBP11.22□□□□□ -0.61
CD164-201ENST00000275080 KIAA1211Q6ZU35 1233 aa11.22□□□□□ -0.61
CD164-201ENST00000275080 USP26Q9BXU7 913 aa11.22□□□□□ -0.61
CD164-201ENST00000275080 IL16Q14005 1332 aa11.22□□□□□ -0.61
CD164-201ENST00000275080 YTHDC2Q9H6S0 1430 aaKnown RBP11.22□□□□□ -0.61
CD164-201ENST00000275080 FAM69CQ0P6D2 419 aa11.22□□□□□ -0.61
CD164-201ENST00000275080 EIF4A2Q14240 407 aaKnown RBP11.22□□□□□ -0.61
CD164-201ENST00000275080 INTS3Q68E01 1043 aaKnown RBP11.22□□□□□ -0.61
CD164-201ENST00000275080 PPP6R1Q9UPN7 881 aa11.22□□□□□ -0.61
CD164-201ENST00000275080 CHMP3Q9Y3E7 222 aa11.22□□□□□ -0.61
CD164-201ENST00000275080 CLTCQ00610 1675 aaKnown RBP11.22□□□□□ -0.61
CD164-201ENST00000275080 PTPRMP28827 1452 aa11.21□□□□□ -0.61
CD164-201ENST00000275080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.21□□□□□ -0.61
CD164-201ENST00000275080 CEP85Q6P2H3 762 aa11.21□□□□□ -0.61
CD164-201ENST00000275080 USHBP1Q8N6Y0 703 aa11.21□□□□□ -0.61
CD164-201ENST00000275080 UBE2Q2Q8WVN8 375 aa11.21□□□□□ -0.61
CD164-201ENST00000275080 RTF1Q92541 710 aaKnown RBP11.21□□□□□ -0.61
CD164-201ENST00000275080 RBSNQ9H1K0 784 aa11.21□□□□□ -0.61
CD164-201ENST00000275080 ANXA1P04083 346 aa11.21□□□□□ -0.62
CD164-201ENST00000275080 DDIT3P35638 169 aa11.21□□□□□ -0.62
CD164-201ENST00000275080 ZSCAN23Q3MJ62 389 aa11.21□□□□□ -0.62
CD164-201ENST00000275080 CASC1Q6TDU7 716 aa11.21□□□□□ -0.62
CD164-201ENST00000275080 NUTM1Q86Y26 1132 aa11.21□□□□□ -0.62
CD164-201ENST00000275080 MYO5BQ9ULV0 1848 aa11.21□□□□□ -0.62
CD164-201ENST00000275080 WASLO00401 505 aaPredicted RBP11.2□□□□□ -0.62
CD164-201ENST00000275080 PTMAP06454 111 aaKnown RBP11.2□□□□□ -0.62
CD164-201ENST00000275080 DCTPP1Q9H773 170 aa11.2□□□□□ -0.62
CD164-201ENST00000275080 PALD1Q9ULE6 856 aa11.2□□□□□ -0.62
CD164-201ENST00000275080 MED14O60244 1454 aa11.2□□□□□ -0.62
CD164-201ENST00000275080 MSH6P52701 1360 aa11.2□□□□□ -0.62
CD164-201ENST00000275080 ST18O60284 1047 aa11.2□□□□□ -0.62
CD164-201ENST00000275080 ZNF830Q96NB3 372 aaPredicted RBP11.19□□□□□ -0.62
CD164-201ENST00000275080 CPA1P15085 419 aa11.19□□□□□ -0.62
CD164-201ENST00000275080 JARID2Q92833 1246 aaPredicted RBP11.19□□□□□ -0.62
CD164-201ENST00000275080 ANKRD26Q9UPS8 1709 aa11.19□□□□□ -0.62
CD164-201ENST00000275080 PNMA6EA0A0J9YXQ4 647 aa11.19□□□□□ -0.62
CD164-201ENST00000275080 RABEP1Q15276 862 aa11.19□□□□□ -0.62
CD164-201ENST00000275080 SKOR2Q2VWA4 1001 aaPredicted RBP11.19□□□□□ -0.62
CD164-201ENST00000275080 GPT2Q8TD30 523 aa11.19□□□□□ -0.62
CD164-201ENST00000275080 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
CD164-201ENST00000275080 ADGRB2O60241 1585 aa11.19□□□□□ -0.62
CD164-201ENST00000275080 KIF13AQ9H1H9 1805 aa11.18□□□□□ -0.62
CD164-201ENST00000275080 UNC5CLQ8IV45 518 aa11.18□□□□□ -0.62
CD164-201ENST00000275080 ABCC4O15439 1325 aa11.18□□□□□ -0.62
CD164-201ENST00000275080 ALKQ9UM73 1620 aa11.18□□□□□ -0.62
CD164-201ENST00000275080 AMPHP49418 695 aa11.18□□□□□ -0.62
CD164-201ENST00000275080 DNTTIP2Q5QJE6 756 aaKnown RBP11.18□□□□□ -0.62
CD164-201ENST00000275080 FAM177BA6PVY3 158 aa11.17□□□□□ -0.62
CD164-201ENST00000275080 CEBPAP49715 358 aaPredicted RBP11.17□□□□□ -0.62
CD164-201ENST00000275080 ANKRD44Q8N8A2 993 aa11.17□□□□□ -0.62
CD164-201ENST00000275080 LMBRD1Q9NUN5 540 aa11.17□□□□□ -0.62
CD164-201ENST00000275080 TMEM63CQ9P1W3 806 aa11.17□□□□□ -0.62
CD164-201ENST00000275080 TAOK2Q9UL54 1235 aa11.17□□□□□ -0.62
CD164-201ENST00000275080 KLHL40Q2TBA0 621 aa11.17□□□□□ -0.62
CD164-201ENST00000275080 CHMP4BQ9H444 224 aaKnown RBP11.17□□□□□ -0.62
CD164-201ENST00000275080 CIZ1Q9ULV3 898 aaPredicted RBP11.17□□□□□ -0.62
CD164-201ENST00000275080 ZDHHC9Q9Y397 364 aa11.17□□□□□ -0.62
CD164-201ENST00000275080 MTHFSDQ2M296 383 aaKnown RBP11.16□□□□□ -0.62
CD164-201ENST00000275080 TSC1Q92574 1164 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 TMX3Q96JJ7 454 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 LRRC7Q96NW7 1537 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 SPATA31D1Q6ZQQ2 1576 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 ERC2O15083 957 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 ZNF853P0CG23 659 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 PDE1AP54750 535 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 LMOD3Q0VAK6 560 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 NGDNQ8NEJ9 315 aaKnown RBP11.16□□□□□ -0.62
CD164-201ENST00000275080 DLC1Q96QB1 1528 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 C17orf53Q8N3J3 647 aaPredicted RBP11.16□□□□□ -0.62
CD164-201ENST00000275080 ARHGAP45Q92619 1136 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 STK31Q9BXU1 1019 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 IL25Q9H293 177 aa11.16□□□□□ -0.62
CD164-201ENST00000275080 CCDC9Q9Y3X0 531 aaKnown RBP11.16□□□□□ -0.62
CD164-201ENST00000275080 LRRFIP2Q9Y608 721 aaKnown RBP11.16□□□□□ -0.62
CD164-201ENST00000275080 CD163L1Q9NR16 1453 aa11.15□□□□□ -0.62
CD164-201ENST00000275080 ARHGEF40Q8TER5 1519 aa11.15□□□□□ -0.62
CD164-201ENST00000275080 GADD45BO75293 160 aaPredicted RBP11.15□□□□□ -0.62
CD164-201ENST00000275080 REC8O95072 547 aa11.15□□□□□ -0.62
CD164-201ENST00000275080 LMOD2Q6P5Q4 547 aa11.15□□□□□ -0.62
CD164-201ENST00000275080 METP08581 1390 aa11.15□□□□□ -0.62
CD164-201ENST00000275080 ACEP12821 1306 aa11.15□□□□□ -0.62
CD164-201ENST00000275080 NUCB2P80303 420 aa11.15□□□□□ -0.62
CD164-201ENST00000275080 COL3A1P02461 1466 aaPredicted RBP11.14□□□□□ -0.63
CD164-201ENST00000275080 RIMS2Q9UQ26 1411 aa11.14□□□□□ -0.63
CD164-201ENST00000275080 PHAXQ9H814 394 aaKnown RBP11.14□□□□□ -0.63
CD164-201ENST00000275080 SPG7Q9UQ90 795 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms