RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 SYTL4Q96C24 671 aaPredicted RBP21.3■■□□□ 1
SOD1-201ENST00000270142 NSD2O96028 1365 aa21.3■■□□□ 1
SOD1-201ENST00000270142 SMG6Q86US8 1419 aaKnown RBP21.29■■□□□ 1
SOD1-201ENST00000270142 PRIM1P49642 420 aaKnown RBP21.29■■□□□ 1
SOD1-201ENST00000270142 KAT6BQ8WYB5 2073 aa21.28■■□□□ 1
SOD1-201ENST00000270142 DCAF8L1A6NGE4 600 aa21.28■■□□□ 1
SOD1-201ENST00000270142 HSP90AB2PQ58FF8 381 aa21.28■■□□□ 1
SOD1-201ENST00000270142 SLC27A3Q5K4L6 730 aa21.28■■□□□ 1
SOD1-201ENST00000270142 AKT1S1Q96B36 256 aa21.28■■□□□ 1
SOD1-201ENST00000270142 CARD14Q9BXL6 1004 aa21.28■■□□□ 1
SOD1-201ENST00000270142 NSD3Q9BZ95 1437 aa21.28■■□□□ 1
SOD1-201ENST00000270142 INSRP06213 1382 aa21.27■■□□□ 1
SOD1-201ENST00000270142 FHDC1Q9C0D6 1143 aaPredicted RBP21.27■■□□□ 1
SOD1-201ENST00000270142 FLT4P35916 1363 aa21.26■□□□□ 0.99
SOD1-201ENST00000270142 TIMELESSQ9UNS1 1208 aa21.26■□□□□ 0.99
SOD1-201ENST00000270142 KCNQ4P56696 695 aa21.25■□□□□ 0.99
SOD1-201ENST00000270142 SYT17Q9BSW7 474 aa21.25■□□□□ 0.99
SOD1-201ENST00000270142 CGNL1Q0VF96 1302 aa21.25■□□□□ 0.99
SOD1-201ENST00000270142 KIF24Q5T7B8 1368 aa21.24■□□□□ 0.99
SOD1-201ENST00000270142 RAPGEF4Q8WZA2 1011 aa21.24■□□□□ 0.99
SOD1-201ENST00000270142 TATP17735 454 aaPredicted RBP21.23■□□□□ 0.99
SOD1-201ENST00000270142 EMILIN1Q9Y6C2 1016 aa21.23■□□□□ 0.99
SOD1-201ENST00000270142 LY75O60449 1722 aa21.23■□□□□ 0.99
SOD1-201ENST00000270142 ARXQ96QS3 562 aa21.22■□□□□ 0.99
SOD1-201ENST00000270142 PNPLA7Q6ZV29 1317 aa21.22■□□□□ 0.99
SOD1-201ENST00000270142 CLSPNQ9HAW4 1339 aa21.22■□□□□ 0.99
SOD1-201ENST00000270142 QSER1Q2KHR3 1735 aa21.21■□□□□ 0.99
SOD1-201ENST00000270142 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
SOD1-201ENST00000270142 UTRNP46939 3433 aa21.2■□□□□ 0.98
SOD1-201ENST00000270142 TFCP2L1Q9NZI6 479 aa21.19■□□□□ 0.98
SOD1-201ENST00000270142 CCNL1Q9UK58 526 aaPredicted RBP21.19■□□□□ 0.98
SOD1-201ENST00000270142 TUBGCP6Q96RT7 1819 aa21.19■□□□□ 0.98
SOD1-201ENST00000270142 PCDH11XQ9BZA7 1347 aa21.19■□□□□ 0.98
SOD1-201ENST00000270142 PCDH11YQ9BZA8 1340 aa21.19■□□□□ 0.98
SOD1-201ENST00000270142 SLC16A10Q8TF71 515 aa21.18■□□□□ 0.98
SOD1-201ENST00000270142 MAP3K5Q99683 1374 aa21.17■□□□□ 0.98
SOD1-201ENST00000270142 ANKRD26Q9UPS8 1709 aa21.16■□□□□ 0.98
SOD1-201ENST00000270142 NCAPD2Q15021 1401 aa21.16■□□□□ 0.98
SOD1-201ENST00000270142 PPM1GO15355 546 aaPredicted RBP21.16■□□□□ 0.98
SOD1-201ENST00000270142 CYP27B1O15528 508 aa21.15■□□□□ 0.98
SOD1-201ENST00000270142 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
SOD1-201ENST00000270142 COL24A1Q17RW2 1714 aa21.14■□□□□ 0.97
SOD1-201ENST00000270142 PKD1L3Q7Z443 1732 aa21.13■□□□□ 0.97
SOD1-201ENST00000270142 TOGARAM1Q9Y4F4 1720 aa21.13■□□□□ 0.97
SOD1-201ENST00000270142 WASHC2AQ641Q2 1341 aa21.13■□□□□ 0.97
SOD1-201ENST00000270142 POLD1P28340 1107 aa21.13■□□□□ 0.97
SOD1-201ENST00000270142 MPRIPQ6WCQ1 1025 aa21.12■□□□□ 0.97
SOD1-201ENST00000270142 PALLDQ8WX93 1383 aa21.11■□□□□ 0.97
SOD1-201ENST00000270142 KLHL34Q8N239 644 aa21.11■□□□□ 0.97
SOD1-201ENST00000270142 POLKQ9UBT6 870 aa21.11■□□□□ 0.97
SOD1-201ENST00000270142 COL23A1Q86Y22 540 aaPredicted RBP21.1■□□□□ 0.97
SOD1-201ENST00000270142 EYA1Q99502 592 aa21.1■□□□□ 0.97
SOD1-201ENST00000270142 C5P01031 1676 aa21.09■□□□□ 0.97
SOD1-201ENST00000270142 MAP2P11137 1827 aaKnown RBP21.08■□□□□ 0.97
SOD1-201ENST00000270142 MSH5O43196 834 aa21.08■□□□□ 0.97
SOD1-201ENST00000270142 HSPA5P11021 654 aaKnown RBP21.08■□□□□ 0.97
SOD1-201ENST00000270142 TNNT2P45379 298 aaPredicted RBP21.07■□□□□ 0.96
SOD1-201ENST00000270142 EIF4G2P78344 907 aaKnown RBP eCLIP21.07■□□□□ 0.96
SOD1-201ENST00000270142 NKX1-1Q15270 411 aaPredicted RBP21.07■□□□□ 0.96
SOD1-201ENST00000270142 SPG7Q9UQ90 795 aa21.07■□□□□ 0.96
SOD1-201ENST00000270142 ITGB4P16144 1822 aa21.06■□□□□ 0.96
SOD1-201ENST00000270142 EIF4A2Q14240 407 aaKnown RBP21.05■□□□□ 0.96
SOD1-201ENST00000270142 ZNF784Q8NCA9 323 aaPredicted RBP21.05■□□□□ 0.96
SOD1-201ENST00000270142 NLGN2Q8NFZ4 835 aa21.05■□□□□ 0.96
SOD1-201ENST00000270142 PIGBQ92521 554 aa21.05■□□□□ 0.96
SOD1-201ENST00000270142 TAF1LQ8IZX4 1826 aa21.04■□□□□ 0.96
SOD1-201ENST00000270142 GPR162Q16538 588 aa21.04■□□□□ 0.96
SOD1-201ENST00000270142 MSL1Q68DK7 614 aa21.04■□□□□ 0.96
SOD1-201ENST00000270142 SMARCC1Q92922 1105 aaPredicted RBP21.04■□□□□ 0.96
SOD1-201ENST00000270142 PANK3Q9H999 370 aa21.04■□□□□ 0.96
SOD1-201ENST00000270142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.03■□□□□ 0.96
SOD1-201ENST00000270142 C4BP0C0L5 1744 aa21.03■□□□□ 0.96
SOD1-201ENST00000270142 PHKG2P15735 406 aa21.02■□□□□ 0.96
SOD1-201ENST00000270142 AMIGO3Q86WK7 504 aa21.01■□□□□ 0.95
SOD1-201ENST00000270142 IFNL2Q8IZJ0 200 aa21.01■□□□□ 0.95
SOD1-201ENST00000270142 PELP1Q8IZL8 1130 aaKnown RBP21.01■□□□□ 0.95
SOD1-201ENST00000270142 HMGB2P26583 209 aaKnown RBP21■□□□□ 0.95
SOD1-201ENST00000270142 FLAD1Q8NFF5 587 aa21■□□□□ 0.95
SOD1-201ENST00000270142 CCER1Q8TC90 406 aaPredicted RBP21■□□□□ 0.95
SOD1-201ENST00000270142 AK7Q96M32 723 aa21■□□□□ 0.95
SOD1-201ENST00000270142 CHD4Q14839 1912 aa21■□□□□ 0.95
SOD1-201ENST00000270142 TMOD3Q9NYL9 352 aa20.99■□□□□ 0.95
SOD1-201ENST00000270142 IGSF1Q8N6C5 1336 aa20.99■□□□□ 0.95
SOD1-201ENST00000270142 GOLGB1Q14789 3259 aaKnown RBP20.98■□□□□ 0.95
SOD1-201ENST00000270142 LOC102724428A0A0B4J2F2 783 aa20.98■□□□□ 0.95
SOD1-201ENST00000270142 SIK1P57059 783 aa20.98■□□□□ 0.95
SOD1-201ENST00000270142 SMIM5Q71RC9 77 aa20.98■□□□□ 0.95
SOD1-201ENST00000270142 PLEKHG2Q9H7P9 1386 aa20.97■□□□□ 0.95
SOD1-201ENST00000270142 PHF14O94880 888 aa20.97■□□□□ 0.95
SOD1-201ENST00000270142 LINC00116Q8NCU8 138 aa20.97■□□□□ 0.95
SOD1-201ENST00000270142 ASAP1Q9ULH1 1129 aa20.97■□□□□ 0.95
SOD1-201ENST00000270142 UBR3Q6ZT12 1888 aa20.95■□□□□ 0.94
SOD1-201ENST00000270142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.94■□□□□ 0.94
SOD1-201ENST00000270142 YBX3P16989 372 aaKnown RBP eCLIP20.94■□□□□ 0.94
SOD1-201ENST00000270142 ITPK1Q13572 414 aa20.94■□□□□ 0.94
SOD1-201ENST00000270142 ATG3Q9NT62 314 aa20.94■□□□□ 0.94
SOD1-201ENST00000270142 SSFA2P28290 1259 aa20.93■□□□□ 0.94
SOD1-201ENST00000270142 MORC1Q86VD1 984 aa20.93■□□□□ 0.94
SOD1-201ENST00000270142 ATP6V1AP38606 617 aa20.92■□□□□ 0.94
SOD1-201ENST00000270142 CD2APQ9Y5K6 639 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms