RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 NRXN3Q9Y4C0 1643 aa27.41■■□□□ 1.98
CDR2-201ENST00000268383 F6X3S4 739 aa27.4■■□□□ 1.98
CDR2-201ENST00000268383 USP26Q9BXU7 913 aa27.4■■□□□ 1.98
CDR2-201ENST00000268383 SLC4A10Q6U841 1118 aa27.4■■□□□ 1.98
CDR2-201ENST00000268383 CHL1O00533 1208 aa27.39■■□□□ 1.98
CDR2-201ENST00000268383 SLC4A2P04920 1241 aa27.39■■□□□ 1.98
CDR2-201ENST00000268383 G2E3Q7L622 706 aa27.39■■□□□ 1.98
CDR2-201ENST00000268383 BAG4O95429 457 aaKnown RBP27.38■■□□□ 1.97
CDR2-201ENST00000268383 TSHZ3Q63HK5 1081 aa27.38■■□□□ 1.97
CDR2-201ENST00000268383 CHAMP1Q96JM3 812 aa27.37■■□□□ 1.97
CDR2-201ENST00000268383 NAP1L5Q96NT1 182 aaPredicted RBP27.37■■□□□ 1.97
CDR2-201ENST00000268383 RTL1A6NKG5 1358 aa27.37■■□□□ 1.97
CDR2-201ENST00000268383 DDX49Q9Y6V7 483 aaKnown RBP27.35■■□□□ 1.97
CDR2-201ENST00000268383 ACEP12821 1306 aa27.35■■□□□ 1.97
CDR2-201ENST00000268383 TTC21BQ7Z4L5 1316 aa27.35■■□□□ 1.97
CDR2-201ENST00000268383 MCTP1Q6DN14 999 aa27.35■■□□□ 1.97
CDR2-201ENST00000268383 ZGPATQ8N5A5 531 aaKnown RBP27.35■■□□□ 1.97
CDR2-201ENST00000268383 CLCN1P35523 988 aa27.34■■□□□ 1.97
CDR2-201ENST00000268383 RABEP1Q15276 862 aa27.34■■□□□ 1.97
CDR2-201ENST00000268383 MON2Q7Z3U7 1717 aa27.34■■□□□ 1.97
CDR2-201ENST00000268383 SPATA31D1Q6ZQQ2 1576 aa27.34■■□□□ 1.97
CDR2-201ENST00000268383 ROBO2Q9HCK4 1378 aa27.33■■□□□ 1.97
CDR2-201ENST00000268383 RPAP2Q8IXW5 612 aaPredicted RBP27.33■■□□□ 1.97
CDR2-201ENST00000268383 NCLP19338 710 aaKnown RBP27.32■■□□□ 1.96
CDR2-201ENST00000268383 SKOR2Q2VWA4 1001 aaPredicted RBP27.32■■□□□ 1.96
CDR2-201ENST00000268383 C3P01024 1663 aa27.32■■□□□ 1.96
CDR2-201ENST00000268383 NECTIN2Q92692 538 aa27.32■■□□□ 1.96
CDR2-201ENST00000268383 ESPNB1AK53 854 aa27.31■■□□□ 1.96
CDR2-201ENST00000268383 FOXD4L5Q5VV16 416 aaPredicted RBP27.3■■□□□ 1.96
CDR2-201ENST00000268383 FOXD4L4Q8WXT5 416 aaPredicted RBP27.3■■□□□ 1.96
CDR2-201ENST00000268383 KIF24Q5T7B8 1368 aa27.29■■□□□ 1.96
CDR2-201ENST00000268383 EXOC6BQ9Y2D4 811 aa27.29■■□□□ 1.96
CDR2-201ENST00000268383 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.29■■□□□ 1.96
CDR2-201ENST00000268383 GOLGA6L22H0YM25 854 aa27.28■■□□□ 1.96
CDR2-201ENST00000268383 ITSN1Q15811 1721 aa27.28■■□□□ 1.96
CDR2-201ENST00000268383 MTHFSDQ2M296 383 aaKnown RBP27.28■■□□□ 1.96
CDR2-201ENST00000268383 ESF1Q9H501 851 aaKnown RBP27.28■■□□□ 1.96
CDR2-201ENST00000268383 MAP3K19Q56UN5 1328 aa27.28■■□□□ 1.96
CDR2-201ENST00000268383 TRIM44Q96DX7 344 aaPredicted RBP27.28■■□□□ 1.96
CDR2-201ENST00000268383 AKAP12Q02952 1782 aa27.28■■□□□ 1.96
CDR2-201ENST00000268383 TSPYL4Q9UJ04 414 aa27.27■■□□□ 1.96
CDR2-201ENST00000268383 RIMS1Q86UR5 1692 aaKnown RBP27.26■■□□□ 1.96
CDR2-201ENST00000268383 CAVIN1Q6NZI2 390 aaKnown RBP27.26■■□□□ 1.95
CDR2-201ENST00000268383 PEAK1Q9H792 1746 aa27.25■■□□□ 1.95
CDR2-201ENST00000268383 ISY1Q9ULR0 285 aaKnown RBP27.25■■□□□ 1.95
CDR2-201ENST00000268383 CRB1P82279 1406 aa27.25■■□□□ 1.95
CDR2-201ENST00000268383 PTPRCP08575 1304 aa27.24■■□□□ 1.95
CDR2-201ENST00000268383 KLHL40Q2TBA0 621 aa27.24■■□□□ 1.95
CDR2-201ENST00000268383 PPP6R1Q9UPN7 881 aa27.24■■□□□ 1.95
CDR2-201ENST00000268383 SLC26A8Q96RN1 970 aa27.23■■□□□ 1.95
CDR2-201ENST00000268383 KIAA0232Q92628 1395 aa27.23■■□□□ 1.95
CDR2-201ENST00000268383 NASPP49321 788 aaPredicted RBP27.23■■□□□ 1.95
CDR2-201ENST00000268383 CASC1Q6TDU7 716 aa27.23■■□□□ 1.95
CDR2-201ENST00000268383 REREQ9P2R6 1566 aa27.22■■□□□ 1.95
CDR2-201ENST00000268383 PDE1AP54750 535 aa27.22■■□□□ 1.95
CDR2-201ENST00000268383 NOL8Q76FK4 1167 aaKnown RBP27.22■■□□□ 1.95
CDR2-201ENST00000268383 ZDHHC9Q9Y397 364 aa27.22■■□□□ 1.95
CDR2-201ENST00000268383 CLEC17AQ6ZS10 378 aa27.22■■□□□ 1.95
CDR2-201ENST00000268383 LMBRD1Q9NUN5 540 aa27.22■■□□□ 1.95
CDR2-201ENST00000268383 RBM27Q9P2N5 1060 aaKnown RBP27.22■■□□□ 1.95
CDR2-201ENST00000268383 CYP2E1P05181 493 aaPredicted RBP27.21■■□□□ 1.95
CDR2-201ENST00000268383 PLPPR3Q6T4P5 718 aa27.21■■□□□ 1.95
CDR2-201ENST00000268383 NRKQ7Z2Y5 1582 aa27.21■■□□□ 1.95
CDR2-201ENST00000268383 PRPF40AO75400 957 aaKnown RBP27.21■■□□□ 1.95
CDR2-201ENST00000268383 RTF1Q92541 710 aaKnown RBP27.21■■□□□ 1.95
CDR2-201ENST00000268383 OVOS2A0A0J9YW53 1432 aa27.2■■□□□ 1.95
CDR2-201ENST00000268383 AGLP35573 1532 aa27.2■■□□□ 1.95
CDR2-201ENST00000268383 OVOS2Q6IE36 1432 aa27.2■■□□□ 1.95
CDR2-201ENST00000268383 ST18O60284 1047 aa27.2■■□□□ 1.94
CDR2-201ENST00000268383 ERC2O15083 957 aa27.19■■□□□ 1.94
CDR2-201ENST00000268383 PTMSP20962 102 aa27.19■■□□□ 1.94
CDR2-201ENST00000268383 HAP1P54257 671 aaPredicted RBP27.19■■□□□ 1.94
CDR2-201ENST00000268383 NUCB2P80303 420 aa27.19■■□□□ 1.94
CDR2-201ENST00000268383 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.19■■□□□ 1.94
CDR2-201ENST00000268383 LTKP29376 864 aa27.18■■□□□ 1.94
CDR2-201ENST00000268383 PNMA6EA0A0J9YXQ4 647 aa27.18■■□□□ 1.94
CDR2-201ENST00000268383 TECPR2O15040 1411 aa27.18■■□□□ 1.94
CDR2-201ENST00000268383 NUTM2GQ5VZR2 741 aa27.18■■□□□ 1.94
CDR2-201ENST00000268383 REC8O95072 547 aa27.17■■□□□ 1.94
CDR2-201ENST00000268383 NEK4P51957 841 aa27.17■■□□□ 1.94
CDR2-201ENST00000268383 DIP2BQ9P265 1576 aa27.17■■□□□ 1.94
CDR2-201ENST00000268383 HMMRO75330 724 aa27.17■■□□□ 1.94
CDR2-201ENST00000268383 ZSCAN23Q3MJ62 389 aa27.17■■□□□ 1.94
CDR2-201ENST00000268383 USP6P35125 1406 aa27.17■■□□□ 1.94
CDR2-201ENST00000268383 PALD1Q9ULE6 856 aa27.16■■□□□ 1.94
CDR2-201ENST00000268383 SIRT1Q96EB6 747 aa27.16■■□□□ 1.94
CDR2-201ENST00000268383 EYA1Q99502 592 aa27.16■■□□□ 1.94
CDR2-201ENST00000268383 NSFL1CQ9UNZ2 370 aaKnown RBP27.16■■□□□ 1.94
CDR2-201ENST00000268383 GPT2Q8TD30 523 aa27.15■■□□□ 1.94
CDR2-201ENST00000268383 FKBP5Q13451 457 aaPredicted RBP27.15■■□□□ 1.94
CDR2-201ENST00000268383 RILPL2Q969X0 211 aa27.15■■□□□ 1.94
CDR2-201ENST00000268383 PLEKHG3A1L390 1219 aa27.13■■□□□ 1.93
CDR2-201ENST00000268383 GNAI2P04899 355 aa27.13■■□□□ 1.93
CDR2-201ENST00000268383 TMEM2Q9UHN6 1383 aa27.13■■□□□ 1.93
CDR2-201ENST00000268383 HDGFP51858 240 aaKnown RBP27.13■■□□□ 1.93
CDR2-201ENST00000268383 TRIM6-TRIM34B2RNG4 842 aa27.12■■□□□ 1.93
CDR2-201ENST00000268383 AMPHP49418 695 aa27.12■■□□□ 1.93
CDR2-201ENST00000268383 FOXD4L6Q3SYB3 417 aaPredicted RBP27.12■■□□□ 1.93
CDR2-201ENST00000268383 FOXD4L3Q6VB84 417 aaPredicted RBP27.12■■□□□ 1.93
CDR2-201ENST00000268383 ADAMTS13Q76LX8 1427 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms