RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 GNAI2P04899 355 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 CBFA2T2O43439 604 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 CEP120Q8N960 986 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 PPM1EQ8WY54 764 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 LUC7LQ9NQ29 371 aaKnown RBP6.69□□□□□ -1.34
VCAN-201ENST00000265077 KRT85P78386 507 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 FILIP1LQ4L180 1135 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 DACH1Q9UI36 760 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 PTPN14Q15678 1187 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 NUTM2DQ5VT03 806 aaPredicted RBP6.69□□□□□ -1.34
VCAN-201ENST00000265077 MICALCLQ6ZW33 695 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 TNMDQ9H2S6 317 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 TCEAL9Q9UHQ7 104 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 TCP11L2Q8N4U5 519 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 FBXW7Q969H0 707 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 PRM3Q9NNZ6 103 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 NKTRP30414 1462 aaKnown RBP6.68□□□□□ -1.34
VCAN-201ENST00000265077 MYH10P35580 1976 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 CTTNBP2Q8WZ74 1663 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 G3V3G9 751 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 DCAF8Q5TAQ9 597 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 ZNHIT6Q9NWK9 470 aaKnown RBP6.68□□□□□ -1.34
VCAN-201ENST00000265077 ERBINQ96RT1 1412 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 ERLIN2O94905 339 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 EIF2S2P20042 333 aaKnown RBP6.68□□□□□ -1.34
VCAN-201ENST00000265077 ZNF397Q8NF99 534 aaPredicted RBP6.68□□□□□ -1.34
VCAN-201ENST00000265077 SWAP70Q9UH65 585 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 NOLC1Q14978 699 aaKnown RBP eCLIP6.68□□□□□ -1.34
VCAN-201ENST00000265077 RBBP5Q15291 538 aaKnown RBP6.68□□□□□ -1.34
VCAN-201ENST00000265077 CCDC102AQ96A19 550 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 CDCA7LQ96GN5 454 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 NEBLO76041 1014 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 IBSPP21815 317 aaPredicted RBP6.68□□□□□ -1.34
VCAN-201ENST00000265077 CCDC30Q5VVM6 783 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 EZRP15311 586 aaKnown RBP6.68□□□□□ -1.34
VCAN-201ENST00000265077 PPFIBP1Q86W92 1011 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 CCDC141Q6ZP82 1450 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 KIF1CO43896 1103 aaKnown RBP6.68□□□□□ -1.34
VCAN-201ENST00000265077 FSD1Q9BTV5 496 aa6.68□□□□□ -1.34
VCAN-201ENST00000265077 PDILTQ8N807 584 aa6.67□□□□□ -1.34
VCAN-201ENST00000265077 NOB1Q9ULX3 412 aaKnown RBP6.67□□□□□ -1.34
VCAN-201ENST00000265077 CC2D2AQ9P2K1 1620 aa6.67□□□□□ -1.34
VCAN-201ENST00000265077 STIM1Q13586 685 aa6.67□□□□□ -1.34
VCAN-201ENST00000265077 C16orf45Q96MC5 204 aaPredicted RBP6.67□□□□□ -1.34
VCAN-201ENST00000265077 VPS37DQ86XT2 251 aa6.67□□□□□ -1.34
VCAN-201ENST00000265077 ANKRD18AQ8IVF6 992 aa6.67□□□□□ -1.34
VCAN-201ENST00000265077 ZSCAN31Q96LW9 406 aaPredicted RBP6.67□□□□□ -1.34
VCAN-201ENST00000265077 MAGEC2Q9UBF1 373 aaPredicted RBP6.67□□□□□ -1.34
VCAN-201ENST00000265077 SURF6O75683 361 aaKnown RBP6.67□□□□□ -1.34
VCAN-201ENST00000265077 CCDC172P0C7W6 258 aa6.67□□□□□ -1.34
VCAN-201ENST00000265077 MYO9BQ13459 2157 aa6.67□□□□□ -1.34
VCAN-201ENST00000265077 DHX29Q7Z478 1369 aaKnown RBP6.67□□□□□ -1.34
VCAN-201ENST00000265077 GEMIN8Q9NWZ8 242 aaKnown RBP6.67□□□□□ -1.34
VCAN-201ENST00000265077 ICE2Q659A1 982 aa6.67□□□□□ -1.34
VCAN-201ENST00000265077 RIC3Q7Z5B4 369 aa6.67□□□□□ -1.34
VCAN-201ENST00000265077 LRRCC1Q9C099 1032 aa6.67□□□□□ -1.34
VCAN-201ENST00000265077 TNPO1Q92973 898 aaKnown RBP6.67□□□□□ -1.34
VCAN-201ENST00000265077 PCF11O94913 1555 aaKnown RBP6.66□□□□□ -1.34
VCAN-201ENST00000265077 KRBA2Q6ZNG9 492 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 PRXQ9BXM0 1461 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 MTHFSP49914 203 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 PPP2R5AQ15172 486 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 SYNJ2O15056 1496 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 CEP83Q9Y592 693 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 MIPOL1Q8TD10 442 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 CCDC43Q96MW1 224 aaKnown RBP6.66□□□□□ -1.34
VCAN-201ENST00000265077 WDR66Q8TBY9 1149 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 MICALL1Q8N3F8 863 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 GBP3Q9H0R5 595 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 GPRASP1Q5JY77 1395 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 CCDC27Q2M243 656 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 CEP57L1Q8IYX8 460 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 CHD1LQ86WJ1 897 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 TBC1D2Q9BYX2 928 aa6.66□□□□□ -1.34
VCAN-201ENST00000265077 SLC3A2P08195 630 aaKnown RBP6.65□□□□□ -1.34
VCAN-201ENST00000265077 CASQ1P31415 396 aa6.65□□□□□ -1.34
VCAN-201ENST00000265077 IRX5P78411 483 aaPredicted RBP6.65□□□□□ -1.34
VCAN-201ENST00000265077 KRT32Q14532 448 aa6.65□□□□□ -1.34
VCAN-201ENST00000265077 CDKL5O76039 1030 aa6.65□□□□□ -1.34
VCAN-201ENST00000265077 STK38Q15208 465 aa6.65□□□□□ -1.34
VCAN-201ENST00000265077 DAPK1P53355 1430 aa6.65□□□□□ -1.34
VCAN-201ENST00000265077 AQRO60306 1485 aaKnown RBP eCLIP6.65□□□□□ -1.34
VCAN-201ENST00000265077 ODF2Q5BJF6 829 aa6.65□□□□□ -1.34
VCAN-201ENST00000265077 ATF7IPQ6VMQ6 1270 aa6.65□□□□□ -1.34
VCAN-201ENST00000265077 KLHL40Q2TBA0 621 aa6.65□□□□□ -1.34
VCAN-201ENST00000265077 TWISTNBQ3B726 338 aaPredicted RBP6.65□□□□□ -1.34
VCAN-201ENST00000265077 TBC1D2BQ9UPU7 963 aa6.65□□□□□ -1.34
VCAN-201ENST00000265077 CYP46A1Q9Y6A2 500 aa6.65□□□□□ -1.34
VCAN-201ENST00000265077 SMTNL1A8MU46 457 aa6.65□□□□□ -1.35
VCAN-201ENST00000265077 U2AF2P26368 475 aaKnown RBP eCLIP6.65□□□□□ -1.35
VCAN-201ENST00000265077 RSRC1Q96IZ7 334 aaKnown RBP6.65□□□□□ -1.35
VCAN-201ENST00000265077 PDE4DIPQ5VU43 2346 aa6.65□□□□□ -1.35
VCAN-201ENST00000265077 ANKRD12Q6UB98 2062 aa6.65□□□□□ -1.35
VCAN-201ENST00000265077 CAVIN2O95810 425 aa6.65□□□□□ -1.35
VCAN-201ENST00000265077 LOC102724159A0A0B4J2E5 919 aa6.65□□□□□ -1.35
VCAN-201ENST00000265077 CTAGE5O15320 804 aa6.65□□□□□ -1.35
VCAN-201ENST00000265077 CLNS1AP54105 237 aaKnown RBP6.65□□□□□ -1.35
VCAN-201ENST00000265077 PWP2Q15269 919 aaKnown RBP6.65□□□□□ -1.35
VCAN-201ENST00000265077 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.65□□□□□ -1.35
VCAN-201ENST00000265077 PPP6R1Q9UPN7 881 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms