RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PKD1L3Q7Z443 1732 aa25.15■■□□□ 1.62
CYSTM1-201ENST00000261811 UPF1Q92900 1129 aaKnown RBP eCLIP25.14■■□□□ 1.62
CYSTM1-201ENST00000261811 SPG7Q9UQ90 795 aa25.14■■□□□ 1.62
CYSTM1-201ENST00000261811 SHANK3Q9BYB0 1731 aa25.14■■□□□ 1.62
CYSTM1-201ENST00000261811 MYBBP1AQ9BQG0 1328 aaKnown RBP25.14■■□□□ 1.61
CYSTM1-201ENST00000261811 FAM182BQ5T319 152 aa25.13■■□□□ 1.61
CYSTM1-201ENST00000261811 COL3A1P02461 1466 aaPredicted RBP25.12■■□□□ 1.61
CYSTM1-201ENST00000261811 U2SURPO15042 1029 aaKnown RBP25.12■■□□□ 1.61
CYSTM1-201ENST00000261811 SULT6B1Q6IMI4 303 aa25.12■■□□□ 1.61
CYSTM1-201ENST00000261811 MARCH10Q8NA82 808 aaPredicted RBP25.12■■□□□ 1.61
CYSTM1-201ENST00000261811 DDX54Q8TDD1 881 aaKnown RBP25.12■■□□□ 1.61
CYSTM1-201ENST00000261811 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.12■■□□□ 1.61
CYSTM1-201ENST00000261811 PCDH11XQ9BZA7 1347 aa25.11■■□□□ 1.61
CYSTM1-201ENST00000261811 PCDH11YQ9BZA8 1340 aa25.11■■□□□ 1.61
CYSTM1-201ENST00000261811 EP400Q96L91 3159 aa25.11■■□□□ 1.61
CYSTM1-201ENST00000261811 PRKRIP1Q9H875 184 aaPredicted RBP25.11■■□□□ 1.61
CYSTM1-201ENST00000261811 BCL9O00512 1426 aa25.09■■□□□ 1.61
CYSTM1-201ENST00000261811 ANP32CO43423 234 aa25.09■■□□□ 1.61
CYSTM1-201ENST00000261811 KDRP35968 1356 aa25.08■■□□□ 1.61
CYSTM1-201ENST00000261811 AMOTQ4VCS5 1084 aa25.08■■□□□ 1.6
CYSTM1-201ENST00000261811 PLEKHO1Q53GL0 409 aaPredicted RBP25.08■■□□□ 1.6
CYSTM1-201ENST00000261811 TNS1Q9HBL0 1735 aaKnown RBP25.06■■□□□ 1.6
CYSTM1-201ENST00000261811 TRIM37O94972 964 aa25.05■■□□□ 1.6
CYSTM1-201ENST00000261811 HMOX1P09601 288 aa25.05■■□□□ 1.6
CYSTM1-201ENST00000261811 AEBP1Q8IUX7 1158 aa25.04■■□□□ 1.6
CYSTM1-201ENST00000261811 NHSQ6T4R5 1651 aa25.04■■□□□ 1.6
CYSTM1-201ENST00000261811 U2AF1L5P0DN76 240 aaPredicted RBP25.03■■□□□ 1.6
CYSTM1-201ENST00000261811 BAG6P46379 1132 aa25.03■■□□□ 1.6
CYSTM1-201ENST00000261811 U2AF1Q01081 240 aaKnown RBP eCLIP25.03■■□□□ 1.6
CYSTM1-201ENST00000261811 DOT1LQ8TEK3 1739 aa25.03■■□□□ 1.6
CYSTM1-201ENST00000261811 IFNL2Q8IZJ0 200 aa25.02■■□□□ 1.6
CYSTM1-201ENST00000261811 NEFMP07197 916 aa25.01■■□□□ 1.59
CYSTM1-201ENST00000261811 BCL11BQ9C0K0 894 aaPredicted RBP25.01■■□□□ 1.59
CYSTM1-201ENST00000261811 PNNQ9H307 717 aaKnown RBP25.01■■□□□ 1.59
CYSTM1-201ENST00000261811 VIRMAQ69YN4 1812 aaKnown RBP25.01■■□□□ 1.59
CYSTM1-201ENST00000261811 HSP90AB1P08238 724 aaKnown RBP25■■□□□ 1.59
CYSTM1-201ENST00000261811 C1orf141Q5JVX7 400 aa25■■□□□ 1.59
CYSTM1-201ENST00000261811 ITGB4P16144 1822 aa24.99■■□□□ 1.59
CYSTM1-201ENST00000261811 FCHSD2O94868 740 aa24.98■■□□□ 1.59
CYSTM1-201ENST00000261811 ZNF530Q6P9A1 599 aaPredicted RBP24.98■■□□□ 1.59
CYSTM1-201ENST00000261811 BTAF1O14981 1849 aa24.97■■□□□ 1.59
CYSTM1-201ENST00000261811 CYP27B1O15528 508 aa24.97■■□□□ 1.59
CYSTM1-201ENST00000261811 APBA3O96018 575 aa24.97■■□□□ 1.59
CYSTM1-201ENST00000261811 ACSBG1Q96GR2 724 aa24.97■■□□□ 1.59
CYSTM1-201ENST00000261811 PHKG2P15735 406 aa24.96■■□□□ 1.59
CYSTM1-201ENST00000261811 RGPD3A6NKT7 1758 aaPredicted RBP24.96■■□□□ 1.59
CYSTM1-201ENST00000261811 RGPD4Q7Z3J3 1758 aa24.96■■□□□ 1.59
CYSTM1-201ENST00000261811 NKX1-1Q15270 411 aaPredicted RBP24.95■■□□□ 1.58
CYSTM1-201ENST00000261811 SYTL4Q96C24 671 aaPredicted RBP24.95■■□□□ 1.58
CYSTM1-201ENST00000261811 WDR43Q15061 677 aaKnown RBP eCLIP24.94■■□□□ 1.58
CYSTM1-201ENST00000261811 PRKAR2BP31323 418 aa24.93■■□□□ 1.58
CYSTM1-201ENST00000261811 RSPH6AQ9H0K4 717 aa24.93■■□□□ 1.58
CYSTM1-201ENST00000261811 SCN11AQ9UI33 1791 aa24.93■■□□□ 1.58
CYSTM1-201ENST00000261811 GAS2L2Q8NHY3 880 aa24.92■■□□□ 1.58
CYSTM1-201ENST00000261811 PRIM1P49642 420 aaKnown RBP24.91■■□□□ 1.58
CYSTM1-201ENST00000261811 AKAP4Q5JQC9 854 aa24.91■■□□□ 1.58
CYSTM1-201ENST00000261811 DCAF5Q96JK2 942 aa24.91■■□□□ 1.58
CYSTM1-201ENST00000261811 KCNQ2O43526 872 aa24.9■■□□□ 1.58
CYSTM1-201ENST00000261811 TOGARAM1Q9Y4F4 1720 aa24.9■■□□□ 1.58
CYSTM1-201ENST00000261811 PLSCR1O15162 318 aa24.89■■□□□ 1.58
CYSTM1-201ENST00000261811 DEFB132Q7Z7B7 95 aa24.89■■□□□ 1.58
CYSTM1-201ENST00000261811 EN1Q05925 392 aaPredicted RBP24.88■■□□□ 1.57
CYSTM1-201ENST00000261811 MTHFSDQ2M296 383 aaKnown RBP24.87■■□□□ 1.57
CYSTM1-201ENST00000261811 MAPK8IP3Q9UPT6 1336 aa24.87■■□□□ 1.57
CYSTM1-201ENST00000261811 ERVV-2B6SEH9 535 aa24.86■■□□□ 1.57
CYSTM1-201ENST00000261811 DLG5Q8TDM6 1919 aa24.86■■□□□ 1.57
CYSTM1-201ENST00000261811 MPRIPQ6WCQ1 1025 aa24.86■■□□□ 1.57
CYSTM1-201ENST00000261811 TMOD3Q9NYL9 352 aa24.86■■□□□ 1.57
CYSTM1-201ENST00000261811 RREB1Q92766 1687 aa24.85■■□□□ 1.57
CYSTM1-201ENST00000261811 GNAT3A8MTJ3 354 aa24.84■■□□□ 1.57
CYSTM1-201ENST00000261811 CAMKK2Q96RR4 588 aa24.84■■□□□ 1.57
CYSTM1-201ENST00000261811 MAP3K5Q99683 1374 aa24.83■■□□□ 1.57
CYSTM1-201ENST00000261811 LY75O60449 1722 aa24.83■■□□□ 1.57
CYSTM1-201ENST00000261811 HMGB2P26583 209 aaKnown RBP24.83■■□□□ 1.56
CYSTM1-201ENST00000261811 CABP4P57796 275 aa24.83■■□□□ 1.56
CYSTM1-201ENST00000261811 EZH2Q15910 746 aaKnown RBP24.83■■□□□ 1.56
CYSTM1-201ENST00000261811 PTF1AQ7RTS3 328 aa24.83■■□□□ 1.56
CYSTM1-201ENST00000261811 PHACTR3Q96KR7 559 aa24.83■■□□□ 1.56
CYSTM1-201ENST00000261811 MRS2Q9HD23 443 aa24.82■■□□□ 1.56
CYSTM1-201ENST00000261811 RTF1Q92541 710 aaKnown RBP24.81■■□□□ 1.56
CYSTM1-201ENST00000261811 SMARCC1Q92922 1105 aaPredicted RBP24.81■■□□□ 1.56
CYSTM1-201ENST00000261811 KDM6AO15550 1401 aaPredicted RBP24.8■■□□□ 1.56
CYSTM1-201ENST00000261811 ADAMTS7Q9UKP4 1686 aa24.79■■□□□ 1.56
CYSTM1-201ENST00000261811 NUP188Q5SRE5 1749 aa24.79■■□□□ 1.56
CYSTM1-201ENST00000261811 RNMTO43148 476 aaKnown RBP24.78■■□□□ 1.56
CYSTM1-201ENST00000261811 PIGBQ92521 554 aa24.78■■□□□ 1.56
CYSTM1-201ENST00000261811 PLEKHF1Q96S99 279 aa24.78■■□□□ 1.56
CYSTM1-201ENST00000261811 ADAMTS8Q9UP79 889 aa24.78■■□□□ 1.56
CYSTM1-201ENST00000261811 HTATSF1O43719 755 aaKnown RBP24.77■■□□□ 1.56
CYSTM1-201ENST00000261811 NBPF14Q5TI25 921 aa24.77■■□□□ 1.56
CYSTM1-201ENST00000261811 DIEXFQ68CQ4 756 aaKnown RBP24.77■■□□□ 1.56
CYSTM1-201ENST00000261811 RUNDC1Q96C34 613 aa24.77■■□□□ 1.56
CYSTM1-201ENST00000261811 TXNRD1Q16881 649 aa24.76■■□□□ 1.55
CYSTM1-201ENST00000261811 SLC27A3Q5K4L6 730 aa24.76■■□□□ 1.55
CYSTM1-201ENST00000261811 TEFQ10587 303 aa24.75■■□□□ 1.55
CYSTM1-201ENST00000261811 NFATC2IPQ8NCF5 419 aa24.75■■□□□ 1.55
CYSTM1-201ENST00000261811 NFE2L2Q16236 605 aa24.74■■□□□ 1.55
CYSTM1-201ENST00000261811 SLC52A2Q9HAB3 445 aa24.74■■□□□ 1.55
CYSTM1-201ENST00000261811 LGR6Q9HBX8 967 aa24.74■■□□□ 1.55
CYSTM1-201ENST00000261811 PALLDQ8WX93 1383 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms