RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 KCNA6P17658 529 aa24.04■■□□□ 1.44
LPCAT3-201ENST00000261407 G2E3Q7L622 706 aa24.04■■□□□ 1.44
LPCAT3-201ENST00000261407 TTC21AQ8NDW8 1320 aa24.04■■□□□ 1.44
LPCAT3-201ENST00000261407 GSPT1P15170 499 aaKnown RBP24.03■■□□□ 1.44
LPCAT3-201ENST00000261407 NLRP6P59044 892 aa24.03■■□□□ 1.44
LPCAT3-201ENST00000261407 MEIS3Q99687 375 aa24.03■■□□□ 1.44
LPCAT3-201ENST00000261407 RTN4Q9NQC3 1192 aaKnown RBP24.03■■□□□ 1.44
LPCAT3-201ENST00000261407 ARHGAP23Q9P227 1491 aa24.03■■□□□ 1.44
LPCAT3-201ENST00000261407 DCTPP1Q9H773 170 aa24.03■■□□□ 1.44
LPCAT3-201ENST00000261407 MSH6P52701 1360 aa24.02■■□□□ 1.44
LPCAT3-201ENST00000261407 SLIT1O75093 1534 aa24.02■■□□□ 1.44
LPCAT3-201ENST00000261407 CEP170BQ9Y4F5 1589 aaPredicted RBP24.02■■□□□ 1.44
LPCAT3-201ENST00000261407 APBB1O00213 710 aa24.02■■□□□ 1.44
LPCAT3-201ENST00000261407 OTUD7AQ8TE49 926 aaPredicted RBP24.02■■□□□ 1.44
LPCAT3-201ENST00000261407 KIF2CQ99661 725 aa24.02■■□□□ 1.44
LPCAT3-201ENST00000261407 FLT4P35916 1363 aa24.02■■□□□ 1.44
LPCAT3-201ENST00000261407 DIP2AQ14689 1571 aa24.02■■□□□ 1.44
LPCAT3-201ENST00000261407 PLEKHM2Q8IWE5 1019 aa24.01■■□□□ 1.43
LPCAT3-201ENST00000261407 TSPYL4Q9UJ04 414 aa24.01■■□□□ 1.43
LPCAT3-201ENST00000261407 SBNO1A3KN83 1393 aa24.01■■□□□ 1.43
LPCAT3-201ENST00000261407 KIAA0232Q92628 1395 aa24.01■■□□□ 1.43
LPCAT3-201ENST00000261407 F6X3S4 739 aa24.01■■□□□ 1.43
LPCAT3-201ENST00000261407 ARHGEF10O15013 1369 aa24.01■■□□□ 1.43
LPCAT3-201ENST00000261407 THEMISQ8N1K5 641 aaPredicted RBP24.01■■□□□ 1.43
LPCAT3-201ENST00000261407 RBM33Q96EV2 1170 aaKnown RBP24.01■■□□□ 1.43
LPCAT3-201ENST00000261407 ATP10DQ9P241 1426 aa24■■□□□ 1.43
LPCAT3-201ENST00000261407 RTF1Q92541 710 aaKnown RBP24■■□□□ 1.43
LPCAT3-201ENST00000261407 CEP85Q6P2H3 762 aa24■■□□□ 1.43
LPCAT3-201ENST00000261407 HSCBQ8IWL3 235 aa24■■□□□ 1.43
LPCAT3-201ENST00000261407 SMARCA5O60264 1052 aaPredicted RBP23.99■■□□□ 1.43
LPCAT3-201ENST00000261407 CD2BP2O95400 341 aaKnown RBP23.99■■□□□ 1.43
LPCAT3-201ENST00000261407 ANKRD44Q8N8A2 993 aa23.99■■□□□ 1.43
LPCAT3-201ENST00000261407 RBM42Q9BTD8 480 aaKnown RBP23.99■■□□□ 1.43
LPCAT3-201ENST00000261407 KIF24Q5T7B8 1368 aa23.98■■□□□ 1.43
LPCAT3-201ENST00000261407 IGSF1Q8N6C5 1336 aa23.98■■□□□ 1.43
LPCAT3-201ENST00000261407 SLC4A10Q6U841 1118 aa23.98■■□□□ 1.43
LPCAT3-201ENST00000261407 LTV1Q96GA3 475 aaPredicted RBP23.98■■□□□ 1.43
LPCAT3-201ENST00000261407 RTL1A6NKG5 1358 aa23.97■■□□□ 1.43
LPCAT3-201ENST00000261407 KDRP35968 1356 aa23.97■■□□□ 1.43
LPCAT3-201ENST00000261407 PIK3C2AO00443 1686 aa23.97■■□□□ 1.43
LPCAT3-201ENST00000261407 PTPRCP08575 1304 aa23.96■■□□□ 1.43
LPCAT3-201ENST00000261407 NECTIN2Q92692 538 aa23.96■■□□□ 1.43
LPCAT3-201ENST00000261407 FMN2Q9NZ56 1722 aa23.95■■□□□ 1.42
LPCAT3-201ENST00000261407 HOXC9P31274 260 aa23.95■■□□□ 1.42
LPCAT3-201ENST00000261407 HAP1P54257 671 aaPredicted RBP23.95■■□□□ 1.42
LPCAT3-201ENST00000261407 ABTB2Q8N961 1025 aa23.94■■□□□ 1.42
LPCAT3-201ENST00000261407 CHMP5Q9NZZ3 219 aa23.94■■□□□ 1.42
LPCAT3-201ENST00000261407 RPAP2Q8IXW5 612 aaPredicted RBP23.93■■□□□ 1.42
LPCAT3-201ENST00000261407 MCM4P33991 863 aa23.93■■□□□ 1.42
LPCAT3-201ENST00000261407 C14orf37Q86TY3 774 aa23.93■■□□□ 1.42
LPCAT3-201ENST00000261407 USHBP1Q8N6Y0 703 aa23.93■■□□□ 1.42
LPCAT3-201ENST00000261407 FOXD4L1Q9NU39 408 aa23.93■■□□□ 1.42
LPCAT3-201ENST00000261407 SNX21Q969T3 373 aa23.92■■□□□ 1.42
LPCAT3-201ENST00000261407 CDC45O75419 566 aa23.91■■□□□ 1.42
LPCAT3-201ENST00000261407 TTC22Q5TAA0 569 aa23.91■■□□□ 1.42
LPCAT3-201ENST00000261407 FER1L4A9Z1Z3 1794 aa23.91■■□□□ 1.42
LPCAT3-201ENST00000261407 GAS2L2Q8NHY3 880 aa23.91■■□□□ 1.42
LPCAT3-201ENST00000261407 DDIT3P35638 169 aa23.9■■□□□ 1.42
LPCAT3-201ENST00000261407 IL17REQ8NFR9 667 aa23.9■■□□□ 1.42
LPCAT3-201ENST00000261407 NCOA3Q9Y6Q9 1424 aa23.88■■□□□ 1.41
LPCAT3-201ENST00000261407 GNAT3A8MTJ3 354 aa23.88■■□□□ 1.41
LPCAT3-201ENST00000261407 GZF1Q9H116 711 aaPredicted RBP23.88■■□□□ 1.41
LPCAT3-201ENST00000261407 XRN1Q8IZH2 1706 aaKnown RBP23.88■■□□□ 1.41
LPCAT3-201ENST00000261407 HSP90AB1P08238 724 aaKnown RBP23.87■■□□□ 1.41
LPCAT3-201ENST00000261407 ARXQ96QS3 562 aa23.86■■□□□ 1.41
LPCAT3-201ENST00000261407 SDSP20132 328 aa23.86■■□□□ 1.41
LPCAT3-201ENST00000261407 NWD1Q149M9 1564 aa23.85■■□□□ 1.41
LPCAT3-201ENST00000261407 MARF1Q9Y4F3 1742 aaKnown RBP23.85■■□□□ 1.41
LPCAT3-201ENST00000261407 FLIIQ13045 1269 aa23.84■■□□□ 1.41
LPCAT3-201ENST00000261407 PLEKHG5O94827 1062 aa23.84■■□□□ 1.41
LPCAT3-201ENST00000261407 FKBP5Q13451 457 aaPredicted RBP23.84■■□□□ 1.41
LPCAT3-201ENST00000261407 STK31Q9BXU1 1019 aa23.84■■□□□ 1.41
LPCAT3-201ENST00000261407 EXOC6BQ9Y2D4 811 aa23.83■■□□□ 1.41
LPCAT3-201ENST00000261407 CCT4P50991 539 aaKnown RBP23.82■■□□□ 1.4
LPCAT3-201ENST00000261407 TSHZ3Q63HK5 1081 aa23.82■■□□□ 1.4
LPCAT3-201ENST00000261407 ANKARQ7Z5J8 1434 aa23.82■■□□□ 1.4
LPCAT3-201ENST00000261407 ZBTB7CA1YPR0 619 aa23.81■■□□□ 1.4
LPCAT3-201ENST00000261407 TNPO1Q92973 898 aaKnown RBP23.81■■□□□ 1.4
LPCAT3-201ENST00000261407 PHF8Q9UPP1 1060 aa23.81■■□□□ 1.4
LPCAT3-201ENST00000261407 K7ELQ4 463 aaPredicted RBP23.8■■□□□ 1.4
LPCAT3-201ENST00000261407 HTATSF1O43719 755 aaKnown RBP23.8■■□□□ 1.4
LPCAT3-201ENST00000261407 TRHP20396 242 aaPredicted RBP23.8■■□□□ 1.4
LPCAT3-201ENST00000261407 USP26Q9BXU7 913 aa23.8■■□□□ 1.4
LPCAT3-201ENST00000261407 PNMA6EA0A0J9YXQ4 647 aa23.8■■□□□ 1.4
LPCAT3-201ENST00000261407 TRAK2O60296 914 aa23.8■■□□□ 1.4
LPCAT3-201ENST00000261407 CCDC30Q5VVM6 783 aa23.8■■□□□ 1.4
LPCAT3-201ENST00000261407 MAP3K5Q99683 1374 aa23.79■■□□□ 1.4
LPCAT3-201ENST00000261407 HSP90AA1P07900 732 aaKnown RBP23.79■■□□□ 1.4
LPCAT3-201ENST00000261407 GNAI2P04899 355 aa23.79■■□□□ 1.4
LPCAT3-201ENST00000261407 TAF7Q15545 349 aaPredicted RBP23.79■■□□□ 1.4
LPCAT3-201ENST00000261407 SETD1BQ9UPS6 1966 aaKnown RBP23.78■■□□□ 1.4
LPCAT3-201ENST00000261407 NBPF6Q5VWK0 638 aa23.78■■□□□ 1.4
LPCAT3-201ENST00000261407 NBPF4Q96M43 638 aa23.78■■□□□ 1.4
LPCAT3-201ENST00000261407 PHAXQ9H814 394 aaKnown RBP23.77■■□□□ 1.4
LPCAT3-201ENST00000261407 HMMRO75330 724 aa23.77■■□□□ 1.4
LPCAT3-201ENST00000261407 LGR6Q9HBX8 967 aa23.77■■□□□ 1.4
LPCAT3-201ENST00000261407 ESCO1Q5FWF5 840 aa23.76■■□□□ 1.39
LPCAT3-201ENST00000261407 LRRC37A3O60309 1634 aa23.75■■□□□ 1.39
LPCAT3-201ENST00000261407 PDE1AP54750 535 aa23.75■■□□□ 1.39
LPCAT3-201ENST00000261407 XPCQ01831 940 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms