RNA–Protein interactions for RNA: ENST00000261303.12

PSMC1-201, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC1, Length 4,448 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-201ENST00000261303 CEP126Q9P2H0 1117 aa16.85■□□□□ 0.29
PSMC1-201ENST00000261303 TSR1Q2NL82 804 aaKnown RBP16.85■□□□□ 0.29
PSMC1-201ENST00000261303 ABCC2Q92887 1545 aa16.85■□□□□ 0.29
PSMC1-201ENST00000261303 PIK3C2GO75747 1445 aa16.85■□□□□ 0.29
PSMC1-201ENST00000261303 RAB11FIP3O75154 756 aa16.84■□□□□ 0.29
PSMC1-201ENST00000261303 GLRX3O76003 335 aaKnown RBP16.84■□□□□ 0.29
PSMC1-201ENST00000261303 FLIIQ13045 1269 aa16.84■□□□□ 0.29
PSMC1-201ENST00000261303 VPS53Q5VIR6 699 aa16.84■□□□□ 0.29
PSMC1-201ENST00000261303 TEX14Q8IWB6 1497 aa16.84■□□□□ 0.29
PSMC1-201ENST00000261303 LARP1Q6PKG0 1096 aaKnown RBP16.84■□□□□ 0.29
PSMC1-201ENST00000261303 BLOC1S2Q6QNY1 142 aa16.84■□□□□ 0.29
PSMC1-201ENST00000261303 NUTM1Q86Y26 1132 aa16.84■□□□□ 0.29
PSMC1-201ENST00000261303 DHX16O60231 1041 aaKnown RBP16.84■□□□□ 0.29
PSMC1-201ENST00000261303 SART3Q15020 963 aaKnown RBP16.84■□□□□ 0.29
PSMC1-201ENST00000261303 ARHGAP45Q92619 1136 aa16.84■□□□□ 0.29
PSMC1-201ENST00000261303 HSP90AB2PQ58FF8 381 aa16.83■□□□□ 0.29
PSMC1-201ENST00000261303 TTC39AQ5SRH9 613 aa16.83■□□□□ 0.29
PSMC1-201ENST00000261303 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
PSMC1-201ENST00000261303 LETM1O95202 739 aaPredicted RBP16.83■□□□□ 0.28
PSMC1-201ENST00000261303 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.28
PSMC1-201ENST00000261303 DBF4Q9UBU7 674 aaPredicted RBP16.82■□□□□ 0.28
PSMC1-201ENST00000261303 BMP2KLQ5H9B9 411 aa16.82■□□□□ 0.28
PSMC1-201ENST00000261303 AEBP1Q8IUX7 1158 aa16.82■□□□□ 0.28
PSMC1-201ENST00000261303 PCDHB15Q9Y5E8 787 aa16.82■□□□□ 0.28
PSMC1-201ENST00000261303 MEX3CQ5U5Q3 659 aaKnown RBP16.82■□□□□ 0.28
PSMC1-201ENST00000261303 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.82■□□□□ 0.28
PSMC1-201ENST00000261303 POLKQ9UBT6 870 aa16.82■□□□□ 0.28
PSMC1-201ENST00000261303 BRPF3Q9ULD4 1205 aa16.82■□□□□ 0.28
PSMC1-201ENST00000261303 COL17A1Q9UMD9 1497 aaPredicted RBP16.81■□□□□ 0.28
PSMC1-201ENST00000261303 HSP90AA2PQ14568 343 aaPredicted RBP16.81■□□□□ 0.28
PSMC1-201ENST00000261303 LRRFIP2Q9Y608 721 aaKnown RBP16.81■□□□□ 0.28
PSMC1-201ENST00000261303 PLEKHH1Q9ULM0 1364 aa16.81■□□□□ 0.28
PSMC1-201ENST00000261303 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
PSMC1-201ENST00000261303 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.81■□□□□ 0.28
PSMC1-201ENST00000261303 ANKRD20A12PQ8NF67 263 aa16.81■□□□□ 0.28
PSMC1-201ENST00000261303 CCDC47Q96A33 483 aaKnown RBP16.81■□□□□ 0.28
PSMC1-201ENST00000261303 HDAC1Q13547 482 aaPredicted RBP16.8■□□□□ 0.28
PSMC1-201ENST00000261303 KINO60870 393 aaKnown RBP16.8■□□□□ 0.28
PSMC1-201ENST00000261303 XBP1P17861 261 aa16.8■□□□□ 0.28
PSMC1-201ENST00000261303 TTC21AQ8NDW8 1320 aa16.8■□□□□ 0.28
PSMC1-201ENST00000261303 RIMS2Q9UQ26 1411 aa16.8■□□□□ 0.28
PSMC1-201ENST00000261303 FBXW7Q969H0 707 aa16.8■□□□□ 0.28
PSMC1-201ENST00000261303 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
PSMC1-201ENST00000261303 RAD21O60216 631 aa16.8■□□□□ 0.28
PSMC1-201ENST00000261303 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
PSMC1-201ENST00000261303 LARP1BQ659C4 914 aaKnown RBP16.8■□□□□ 0.28
PSMC1-201ENST00000261303 ZSCAN31Q96LW9 406 aaPredicted RBP16.8■□□□□ 0.28
PSMC1-201ENST00000261303 UPF3BQ9BZI7 483 aaKnown RBP16.8■□□□□ 0.28
PSMC1-201ENST00000261303 TRIM34Q9BYJ4 488 aa16.79■□□□□ 0.28
PSMC1-201ENST00000261303 TSPY26PQ9H489 355 aa16.79■□□□□ 0.28
PSMC1-201ENST00000261303 KRT32Q14532 448 aa16.79■□□□□ 0.28
PSMC1-201ENST00000261303 TPM2P07951 284 aa16.78■□□□□ 0.28
PSMC1-201ENST00000261303 KRT85P78386 507 aa16.78■□□□□ 0.28
PSMC1-201ENST00000261303 FKBP4Q02790 459 aaKnown RBP eCLIP16.78■□□□□ 0.28
PSMC1-201ENST00000261303 STK3Q13188 491 aa16.78■□□□□ 0.28
PSMC1-201ENST00000261303 ZNF592Q92610 1267 aa16.78■□□□□ 0.28
PSMC1-201ENST00000261303 NAT10Q9H0A0 1025 aaKnown RBP16.78■□□□□ 0.28
PSMC1-201ENST00000261303 PDRG1Q9NUG6 133 aa16.78■□□□□ 0.28
PSMC1-201ENST00000261303 MAGI3Q5TCQ9 1506 aa16.78■□□□□ 0.28
PSMC1-201ENST00000261303 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
PSMC1-201ENST00000261303 MPHOSPH8Q99549 860 aa16.78■□□□□ 0.28
PSMC1-201ENST00000261303 CCDC39Q9UFE4 941 aa16.78■□□□□ 0.28
PSMC1-201ENST00000261303 NPC1L1Q9UHC9 1359 aa16.78■□□□□ 0.28
PSMC1-201ENST00000261303 PPIP5K1Q6PFW1 1433 aa16.78■□□□□ 0.28
PSMC1-201ENST00000261303 ZNF396Q96N95 335 aaPredicted RBP16.77■□□□□ 0.28
PSMC1-201ENST00000261303 BRMS1Q9HCU9 246 aa16.77■□□□□ 0.28
PSMC1-201ENST00000261303 HYPKQ9NX55 129 aa16.77■□□□□ 0.28
PSMC1-201ENST00000261303 RRP12Q5JTH9 1297 aaKnown RBP16.76■□□□□ 0.27
PSMC1-201ENST00000261303 GNL3LQ9NVN8 582 aaKnown RBP16.76■□□□□ 0.27
PSMC1-201ENST00000261303 STARD3NLO95772 234 aa16.76■□□□□ 0.27
PSMC1-201ENST00000261303 KRT28Q7Z3Y7 464 aa16.76■□□□□ 0.27
PSMC1-201ENST00000261303 IPO7O95373 1038 aaKnown RBP16.76■□□□□ 0.27
PSMC1-201ENST00000261303 STK38Q15208 465 aa16.76■□□□□ 0.27
PSMC1-201ENST00000261303 ZSCAN25Q6NSZ9 544 aa16.76■□□□□ 0.27
PSMC1-201ENST00000261303 TBC1D9Q6ZT07 1266 aa16.76■□□□□ 0.27
PSMC1-201ENST00000261303 TBC1D32Q96NH3 1257 aa16.76■□□□□ 0.27
PSMC1-201ENST00000261303 GRPEL1Q9HAV7 217 aa16.76■□□□□ 0.27
PSMC1-201ENST00000261303 CTNNA3Q9UI47 895 aa16.76■□□□□ 0.27
PSMC1-201ENST00000261303 CCDC173Q0VFZ6 552 aa16.75■□□□□ 0.27
PSMC1-201ENST00000261303 HOMER1Q86YM7 354 aa16.75■□□□□ 0.27
PSMC1-201ENST00000261303 MYD88Q99836 296 aa16.75■□□□□ 0.27
PSMC1-201ENST00000261303 NACAP1Q9BZK3 213 aa16.75■□□□□ 0.27
PSMC1-201ENST00000261303 TRIM5Q9C035 493 aa16.75■□□□□ 0.27
PSMC1-201ENST00000261303 ZRANB1Q9UGI0 708 aa16.75■□□□□ 0.27
PSMC1-201ENST00000261303 PDIA4P13667 645 aaKnown RBP16.75■□□□□ 0.27
PSMC1-201ENST00000261303 ATP2B1P20020 1258 aa16.75■□□□□ 0.27
PSMC1-201ENST00000261303 EIF4A2Q14240 407 aaKnown RBP16.75■□□□□ 0.27
PSMC1-201ENST00000261303 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
PSMC1-201ENST00000261303 CASTP20810 708 aaKnown RBP16.74■□□□□ 0.27
PSMC1-201ENST00000261303 CEBPZQ03701 1054 aaKnown RBP16.74■□□□□ 0.27
PSMC1-201ENST00000261303 CCAR2Q8N163 923 aaKnown RBP16.74■□□□□ 0.27
PSMC1-201ENST00000261303 C8orf58Q8NAV2 365 aa16.74■□□□□ 0.27
PSMC1-201ENST00000261303 PI4KAP2A4QPH2 592 aa16.74■□□□□ 0.27
PSMC1-201ENST00000261303 PI4KAP1Q8N8J0 262 aa16.74■□□□□ 0.27
PSMC1-201ENST00000261303 BOLA2Q9H3K6 86 aa16.74■□□□□ 0.27
PSMC1-201ENST00000261303 NUCB1Q02818 461 aa16.73■□□□□ 0.27
PSMC1-201ENST00000261303 CCDC85AQ96PX6 553 aaPredicted RBP16.73■□□□□ 0.27
PSMC1-201ENST00000261303 PIK3R4Q99570 1358 aa16.73■□□□□ 0.27
PSMC1-201ENST00000261303 KDM4AO75164 1064 aa16.73■□□□□ 0.27
PSMC1-201ENST00000261303 PRKCSHP14314 528 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms