RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 OVOS2A0A0G2JMS6 1433 aa27.58■■■□□ 2.01
RTCA-201ENST00000260563 ONECUT3O60422 494 aaPredicted RBP27.57■■■□□ 2
RTCA-201ENST00000260563 HMOX1P09601 288 aa27.57■■■□□ 2
RTCA-201ENST00000260563 TNS2Q63HR2 1409 aa27.57■■■□□ 2
RTCA-201ENST00000260563 TATP17735 454 aaPredicted RBP27.57■■■□□ 2
RTCA-201ENST00000260563 SEPT12Q8IYM1 358 aa27.56■■■□□ 2
RTCA-201ENST00000260563 FAM9BQ8IZU0 186 aa27.56■■■□□ 2
RTCA-201ENST00000260563 PLEKHG2Q9H7P9 1386 aa27.55■■■□□ 2
RTCA-201ENST00000260563 WDR43Q15061 677 aaKnown RBP eCLIP27.55■■■□□ 2
RTCA-201ENST00000260563 DDB1Q16531 1140 aa27.52■■■□□ 2
RTCA-201ENST00000260563 RSPH6AQ9H0K4 717 aa27.5■■□□□ 1.99
RTCA-201ENST00000260563 EXOC5O00471 708 aa27.49■■□□□ 1.99
RTCA-201ENST00000260563 FCHSD2O94868 740 aa27.48■■□□□ 1.99
RTCA-201ENST00000260563 VIRMAQ69YN4 1812 aaKnown RBP27.48■■□□□ 1.99
RTCA-201ENST00000260563 PRKAR2BP31323 418 aa27.47■■□□□ 1.99
RTCA-201ENST00000260563 PDE3BQ13370 1112 aa27.46■■□□□ 1.99
RTCA-201ENST00000260563 ZCRB1Q8TBF4 217 aaKnown RBP27.46■■□□□ 1.99
RTCA-201ENST00000260563 YTHDC1Q96MU7 727 aaKnown RBP27.46■■□□□ 1.99
RTCA-201ENST00000260563 PCDH11XQ9BZA7 1347 aa27.45■■□□□ 1.98
RTCA-201ENST00000260563 PCDH11YQ9BZA8 1340 aa27.45■■□□□ 1.98
RTCA-201ENST00000260563 PNNQ9H307 717 aaKnown RBP27.45■■□□□ 1.98
RTCA-201ENST00000260563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.45■■□□□ 1.981e-6■■■□□ 15.7
RTCA-201ENST00000260563 SPG7Q9UQ90 795 aa27.45■■□□□ 1.98
RTCA-201ENST00000260563 AMOTQ4VCS5 1084 aa27.44■■□□□ 1.98
RTCA-201ENST00000260563 PLEKHO1Q53GL0 409 aaPredicted RBP27.44■■□□□ 1.98
RTCA-201ENST00000260563 DLG5Q8TDM6 1919 aa27.44■■□□□ 1.98
RTCA-201ENST00000260563 KRT27Q7Z3Y8 459 aa27.43■■□□□ 1.98
RTCA-201ENST00000260563 ADAMTS8Q9UP79 889 aa27.43■■□□□ 1.98
RTCA-201ENST00000260563 NEFMP07197 916 aa27.42■■□□□ 1.98
RTCA-201ENST00000260563 DOT1LQ8TEK3 1739 aa27.41■■□□□ 1.98
RTCA-201ENST00000260563 SBF2Q86WG5 1849 aa27.41■■□□□ 1.98
RTCA-201ENST00000260563 MAPK8IP3Q9UPT6 1336 aa27.4■■□□□ 1.98
RTCA-201ENST00000260563 DDX54Q8TDD1 881 aaKnown RBP27.4■■□□□ 1.98
RTCA-201ENST00000260563 PLEKHF1Q96S99 279 aa27.39■■□□□ 1.98
RTCA-201ENST00000260563 ZNF530Q6P9A1 599 aaPredicted RBP27.38■■□□□ 1.97
RTCA-201ENST00000260563 MARCH10Q8NA82 808 aaPredicted RBP27.37■■□□□ 1.97
RTCA-201ENST00000260563 KAT6BQ8WYB5 2073 aa27.37■■□□□ 1.97
RTCA-201ENST00000260563 TOGARAM1Q9Y4F4 1720 aa27.37■■□□□ 1.97
RTCA-201ENST00000260563 SCN11AQ9UI33 1791 aa27.37■■□□□ 1.97
RTCA-201ENST00000260563 MTHFSDQ2M296 383 aaKnown RBP27.36■■□□□ 1.97
RTCA-201ENST00000260563 CCDC146Q8IYE0 955 aa27.36■■□□□ 1.97
RTCA-201ENST00000260563 GAS2L2Q8NHY3 880 aa27.36■■□□□ 1.97
RTCA-201ENST00000260563 PHACTR3Q96KR7 559 aa27.36■■□□□ 1.97
RTCA-201ENST00000260563 EP400Q96L91 3159 aa27.36■■□□□ 1.97
RTCA-201ENST00000260563 CYP27B1O15528 508 aa27.36■■□□□ 1.97
RTCA-201ENST00000260563 IFNL2Q8IZJ0 200 aa27.36■■□□□ 1.97
RTCA-201ENST00000260563 C1orf141Q5JVX7 400 aa27.35■■□□□ 1.97
RTCA-201ENST00000260563 RUNDC1Q96C34 613 aa27.35■■□□□ 1.97
RTCA-201ENST00000260563 NHSQ6T4R5 1651 aa27.34■■□□□ 1.97
RTCA-201ENST00000260563 PHKG2P15735 406 aa27.34■■□□□ 1.97
RTCA-201ENST00000260563 FAM182BQ5T319 152 aa27.34■■□□□ 1.97
RTCA-201ENST00000260563 ITGB4P16144 1822 aa27.33■■□□□ 1.97
RTCA-201ENST00000260563 ADAMTS7Q9UKP4 1686 aa27.32■■□□□ 1.96
RTCA-201ENST00000260563 BCL9O00512 1426 aa27.32■■□□□ 1.96
RTCA-201ENST00000260563 AKAP4Q5JQC9 854 aa27.31■■□□□ 1.96
RTCA-201ENST00000260563 HNRNPUQ00839 825 aaKnown RBP eCLIP27.31■■□□□ 1.96
RTCA-201ENST00000260563 MAP3K5Q99683 1374 aa27.3■■□□□ 1.96
RTCA-201ENST00000260563 HSP90AB1P08238 724 aaKnown RBP27.3■■□□□ 1.96
RTCA-201ENST00000260563 FAM196AQ6ZSG2 479 aa27.3■■□□□ 1.96
RTCA-201ENST00000260563 ILDR2Q71H61 639 aa27.3■■□□□ 1.96
RTCA-201ENST00000260563 KDM6AO15550 1401 aaPredicted RBP27.27■■□□□ 1.96
RTCA-201ENST00000260563 NKX1-1Q15270 411 aaPredicted RBP27.27■■□□□ 1.96
RTCA-201ENST00000260563 NFE2L2Q16236 605 aa27.27■■□□□ 1.96
RTCA-201ENST00000260563 TNS1Q9HBL0 1735 aaKnown RBP27.26■■□□□ 1.96
RTCA-201ENST00000260563 GNAT3A8MTJ3 354 aa27.26■■□□□ 1.95
RTCA-201ENST00000260563 DCAF5Q96JK2 942 aa27.25■■□□□ 1.95
RTCA-201ENST00000260563 BTAF1O14981 1849 aa27.24■■□□□ 1.95
RTCA-201ENST00000260563 SIPA1L3O60292 1781 aaPredicted RBP27.24■■□□□ 1.95
RTCA-201ENST00000260563 TMPOP42166 694 aaKnown RBP27.23■■□□□ 1.95
RTCA-201ENST00000260563 MPRIPQ6WCQ1 1025 aa27.23■■□□□ 1.95
RTCA-201ENST00000260563 ACSBG1Q96GR2 724 aa27.22■■□□□ 1.95
RTCA-201ENST00000260563 MRC1P22897 1456 aa27.22■■□□□ 1.95
RTCA-201ENST00000260563 APAF1O14727 1248 aa27.21■■□□□ 1.95
RTCA-201ENST00000260563 RTF1Q92541 710 aaKnown RBP27.21■■□□□ 1.95
RTCA-201ENST00000260563 RRP7AQ9Y3A4 280 aaKnown RBP27.21■■□□□ 1.95
RTCA-201ENST00000260563 RIPK4P57078 832 aa27.21■■□□□ 1.95
RTCA-201ENST00000260563 NEUROD2Q15784 382 aa27.2■■□□□ 1.94
RTCA-201ENST00000260563 RNMTO43148 476 aaKnown RBP27.19■■□□□ 1.94
RTCA-201ENST00000260563 HTATSF1O43719 755 aaKnown RBP27.19■■□□□ 1.94
RTCA-201ENST00000260563 SYTL4Q96C24 671 aaPredicted RBP27.19■■□□□ 1.94
RTCA-201ENST00000260563 SENP3-EIF4A1A0A087X0R7 540 aa27.18■■□□□ 1.94
RTCA-201ENST00000260563 LMOD3Q0VAK6 560 aa27.18■■□□□ 1.94
RTCA-201ENST00000260563 ZBED9Q6R2W3 1325 aa27.17■■□□□ 1.94
RTCA-201ENST00000260563 ERVV-2B6SEH9 535 aa27.16■■□□□ 1.94
RTCA-201ENST00000260563 TRIM37O94972 964 aa27.16■■□□□ 1.94
RTCA-201ENST00000260563 LGR6Q9HBX8 967 aa27.16■■□□□ 1.94
RTCA-201ENST00000260563 CEMIPQ8WUJ3 1361 aa27.16■■□□□ 1.94
RTCA-201ENST00000260563 PRIM1P49642 420 aaKnown RBP27.16■■□□□ 1.94
RTCA-201ENST00000260563 KCNQ2O43526 872 aa27.15■■□□□ 1.94
RTCA-201ENST00000260563 MCM10Q7L590 875 aa27.15■■□□□ 1.94
RTCA-201ENST00000260563 PAPPAQ13219 1627 aa27.14■■□□□ 1.94
RTCA-201ENST00000260563 RGPD3A6NKT7 1758 aaPredicted RBP27.14■■□□□ 1.94
RTCA-201ENST00000260563 RGPD4Q7Z3J3 1758 aa27.14■■□□□ 1.94
RTCA-201ENST00000260563 CABP4P57796 275 aa27.14■■□□□ 1.94
RTCA-201ENST00000260563 DCTN1Q14203 1278 aa27.14■■□□□ 1.94
RTCA-201ENST00000260563 IL17REQ8NFR9 667 aa27.14■■□□□ 1.94
RTCA-201ENST00000260563 BCL11BQ9C0K0 894 aaPredicted RBP27.14■■□□□ 1.94
RTCA-201ENST00000260563 TMOD3Q9NYL9 352 aa27.14■■□□□ 1.94
RTCA-201ENST00000260563 SLC52A2Q9HAB3 445 aa27.12■■□□□ 1.93
RTCA-201ENST00000260563 SALL2Q9Y467 1007 aaPredicted RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms