RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ZNF444Q8N0Y2 327 aaPredicted RBP4.79□□□□□ -1.64
RNF38-201ENST00000259605 UBAC1Q9BSL1 405 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 C19orf44Q9H6X5 657 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 VEZTQ9HBM0 779 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 ABT1Q9ULW3 272 aaKnown RBP4.79□□□□□ -1.64
RNF38-201ENST00000259605 DCAF1Q9Y4B6 1507 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 BECN2A8MW95 431 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 SLC5A1P13866 664 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 STIM1Q13586 685 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 PPP4R3CPQ6ZMV5 832 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 CCDC146Q8IYE0 955 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 PDILTQ8N807 584 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 CTNNA3Q9UI47 895 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 GOLGA6L19H0YKK7 550 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 M0QZ92 97 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 NPM3O75607 178 aaKnown RBP4.79□□□□□ -1.64
RNF38-201ENST00000259605 FCHSD2O94868 740 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 CCDC96Q2M329 555 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 HACE1Q8IYU2 909 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 AFAP1Q8N556 730 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 RAB34Q9BZG1 259 aa4.79□□□□□ -1.64
RNF38-201ENST00000259605 RBM28Q9NW13 759 aaKnown RBP4.79□□□□□ -1.64
RNF38-201ENST00000259605 TDO2P48775 406 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 RRP12Q5JTH9 1297 aaKnown RBP4.78□□□□□ -1.64
RNF38-201ENST00000259605 NIM1KQ8IY84 436 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 DENND4BO75064 1496 aaPredicted RBP4.78□□□□□ -1.64
RNF38-201ENST00000259605 ATAD2Q6PL18 1390 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 FOXO3O43524 673 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 CCDC178Q5BJE1 867 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 TRAPPC3LQ5T215 181 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 SPOUT1Q5T280 376 aaKnown RBP4.78□□□□□ -1.64
RNF38-201ENST00000259605 ZKSCAN2Q63HK3 967 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 STXBP4Q6ZWJ1 553 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 NECTIN2Q92692 538 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 ANO2Q9NQ90 1003 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 MAGEC2Q9UBF1 373 aaPredicted RBP4.78□□□□□ -1.64
RNF38-201ENST00000259605 CCDC61Q9Y6R9 512 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 NR1I2O75469 434 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 KIF20AO95235 890 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 SMC2O95347 1197 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 SLU7O95391 586 aaKnown RBP4.78□□□□□ -1.64
RNF38-201ENST00000259605 VIMP08670 466 aaKnown RBP4.78□□□□□ -1.64
RNF38-201ENST00000259605 MSNP26038 577 aaKnown RBP4.78□□□□□ -1.64
RNF38-201ENST00000259605 HOXD10P28358 340 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 RIPK4P57078 832 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 HDGFL1Q5TGJ6 251 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 RNF216Q9NWF9 866 aaPredicted RBP4.78□□□□□ -1.64
RNF38-201ENST00000259605 TRMT112Q9UI30 125 aaKnown RBP4.78□□□□□ -1.64
RNF38-201ENST00000259605 CSADQ9Y600 493 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 DAPK1P53355 1430 aa4.78□□□□□ -1.64
RNF38-201ENST00000259605 ELL2O00472 640 aaPredicted RBP4.78□□□□□ -1.65
RNF38-201ENST00000259605 EZRP15311 586 aaKnown RBP4.78□□□□□ -1.65
RNF38-201ENST00000259605 XPCQ01831 940 aaPredicted RBP4.78□□□□□ -1.65
RNF38-201ENST00000259605 TNFAIP1Q13829 316 aa4.78□□□□□ -1.65
RNF38-201ENST00000259605 FAM161AQ3B820 660 aa4.78□□□□□ -1.65
RNF38-201ENST00000259605 IFNL2Q8IZJ0 200 aa4.78□□□□□ -1.65
RNF38-201ENST00000259605 DCPSQ96C86 337 aaKnown RBP4.78□□□□□ -1.65
RNF38-201ENST00000259605 PRAM1Q96QH2 718 aa4.78□□□□□ -1.65
RNF38-201ENST00000259605 FSD1Q9BTV5 496 aa4.78□□□□□ -1.65
RNF38-201ENST00000259605 BCS1LQ9Y276 419 aa4.78□□□□□ -1.65
RNF38-201ENST00000259605 EPRSP07814 1512 aaKnown RBP4.77□□□□□ -1.65
RNF38-201ENST00000259605 CCDC69A6NI79 296 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 PLCG2P16885 1265 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 KMT5BQ4FZB7 885 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 AMOTL2Q9Y2J4 779 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 COMMD10Q9Y6G5 202 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 TNRQ92752 1358 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 NCOA2Q15596 1464 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 CDKL5O76039 1030 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 BAG4O95429 457 aaKnown RBP4.77□□□□□ -1.65
RNF38-201ENST00000259605 SKIV2LQ15477 1246 aaKnown RBP4.77□□□□□ -1.65
RNF38-201ENST00000259605 METTL24Q5JXM2 366 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 ZNF804AQ7Z570 1209 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 USP37Q86T82 979 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 SULF1Q8IWU6 871 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 JMYQ8N9B5 988 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 CCDC12Q8WUD4 166 aaPredicted RBP4.77□□□□□ -1.65
RNF38-201ENST00000259605 RBM17Q96I25 401 aaKnown RBP4.77□□□□□ -1.65
RNF38-201ENST00000259605 ABCF2Q9UG63 623 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 PDZRN3Q9UPQ7 1066 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 ANKRD18BA2A2Z9 1011 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 NAP1L1P55209 391 aaKnown RBP4.77□□□□□ -1.65
RNF38-201ENST00000259605 LARGE2Q8N3Y3 721 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 SMCR8Q8TEV9 937 aaPredicted RBP4.77□□□□□ -1.65
RNF38-201ENST00000259605 FMNL2Q96PY5 1086 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 ZHX3Q9H4I2 956 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 MAST3O60307 1309 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 PTCD1O75127 700 aaKnown RBP4.77□□□□□ -1.65
RNF38-201ENST00000259605 MAP3K12Q12852 859 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 RBM26Q5T8P6 1007 aaKnown RBP4.77□□□□□ -1.65
RNF38-201ENST00000259605 CPLX3Q8WVH0 158 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 WASF1Q92558 559 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 EXOC4Q96A65 974 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 RTEL1Q9NZ71 1219 aa4.77□□□□□ -1.65
RNF38-201ENST00000259605 BTBD11A6QL63 1104 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 STK25O00506 426 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 CBX1P83916 185 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 CNTROBQ8N137 903 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 SLC17A8Q8NDX2 589 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 USP47Q96K76 1375 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms