RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 KDM2AQ9Y2K7 1162 aa21.34■■□□□ 1.01
RABEPK-201ENST00000259460 KCNH5Q8NCM2 988 aa21.33■■□□□ 1.01
RABEPK-201ENST00000259460 SYTL4Q96C24 671 aaPredicted RBP21.33■■□□□ 1.01
RABEPK-201ENST00000259460 FSTL1Q12841 308 aa21.32■■□□□ 1
RABEPK-201ENST00000259460 NLRP2Q9NX02 1062 aa21.32■■□□□ 1
RABEPK-201ENST00000259460 NSD2O96028 1365 aa21.31■■□□□ 1
RABEPK-201ENST00000259460 ERBB3P21860 1342 aa21.3■■□□□ 1
RABEPK-201ENST00000259460 CABP2Q9NPB3 220 aa21.29■■□□□ 1
RABEPK-201ENST00000259460 ANKRD36BQ8N2N9 1353 aa21.29■■□□□ 1
RABEPK-201ENST00000259460 PKD1L3Q7Z443 1732 aa21.29■■□□□ 1
RABEPK-201ENST00000259460 LTN1O94822 1766 aa21.28■■□□□ 1
RABEPK-201ENST00000259460 DCAF11Q8TEB1 546 aa21.28■■□□□ 1
RABEPK-201ENST00000259460 DDX54Q8TDD1 881 aaKnown RBP21.27■□□□□ 0.99
RABEPK-201ENST00000259460 TAF1LQ8IZX4 1826 aa21.26■□□□□ 0.99
RABEPK-201ENST00000259460 PRIM1P49642 420 aaKnown RBP21.26■□□□□ 0.99
RABEPK-201ENST00000259460 CABP1Q9NZU7 370 aa21.26■□□□□ 0.99
RABEPK-201ENST00000259460 KIAA1551Q9HCM1 1747 aa21.25■□□□□ 0.99
RABEPK-201ENST00000259460 TOGARAM1Q9Y4F4 1720 aa21.25■□□□□ 0.99
RABEPK-201ENST00000259460 TNRC6CQ9HCJ0 1690 aaKnown RBP21.25■□□□□ 0.99
RABEPK-201ENST00000259460 N4BP2Q86UW6 1770 aaPredicted RBP21.23■□□□□ 0.99
RABEPK-201ENST00000259460 KCPQ6ZWJ8 1503 aa21.23■□□□□ 0.99
RABEPK-201ENST00000259460 USP47Q96K76 1375 aa21.22■□□□□ 0.99
RABEPK-201ENST00000259460 PLEKHG2Q9H7P9 1386 aa21.22■□□□□ 0.99
RABEPK-201ENST00000259460 FLAD1Q8NFF5 587 aa21.22■□□□□ 0.99
RABEPK-201ENST00000259460 TTC21BQ7Z4L5 1316 aa21.21■□□□□ 0.99
RABEPK-201ENST00000259460 PXDNLA1KZ92 1463 aa21.21■□□□□ 0.99
RABEPK-201ENST00000259460 C10orf71Q711Q0 1435 aa21.21■□□□□ 0.99
RABEPK-201ENST00000259460 C4BP0C0L5 1744 aa21.2■□□□□ 0.98
RABEPK-201ENST00000259460 FAM161AQ3B820 660 aa21.2■□□□□ 0.98
RABEPK-201ENST00000259460 FAM208AQ9UK61 1670 aaKnown RBP21.19■□□□□ 0.98
RABEPK-201ENST00000259460 KIF13BQ9NQT8 1826 aa21.19■□□□□ 0.98
RABEPK-201ENST00000259460 ANKRD24Q8TF21 1146 aa21.19■□□□□ 0.98
RABEPK-201ENST00000259460 UBR3Q6ZT12 1888 aa21.19■□□□□ 0.98
RABEPK-201ENST00000259460 KIAA1210Q9ULL0 1709 aa21.18■□□□□ 0.98
RABEPK-201ENST00000259460 BCS1LQ9Y276 419 aa21.18■□□□□ 0.98
RABEPK-201ENST00000259460 ARHGAP27Q6ZUM4 889 aa21.17■□□□□ 0.98
RABEPK-201ENST00000259460 SMC1BQ8NDV3 1235 aa21.17■□□□□ 0.98
RABEPK-201ENST00000259460 TTC21AQ8NDW8 1320 aa21.16■□□□□ 0.98
RABEPK-201ENST00000259460 KDM2BQ8NHM5 1336 aa21.16■□□□□ 0.98
RABEPK-201ENST00000259460 PHF14O94880 888 aa21.14■□□□□ 0.97
RABEPK-201ENST00000259460 C9orf131Q5VYM1 1079 aa21.14■□□□□ 0.97
RABEPK-201ENST00000259460 CENPJQ9HC77 1338 aaPredicted RBP21.14■□□□□ 0.97
RABEPK-201ENST00000259460 BRCA1P38398 1863 aaKnown RBP21.14■□□□□ 0.97
RABEPK-201ENST00000259460 AMIGO3Q86WK7 504 aa21.13■□□□□ 0.97
RABEPK-201ENST00000259460 STAC3Q96MF2 364 aa21.13■□□□□ 0.97
RABEPK-201ENST00000259460 RRAGCQ9HB90 399 aa21.13■□□□□ 0.97
RABEPK-201ENST00000259460 AK7Q96M32 723 aa21.12■□□□□ 0.97
RABEPK-201ENST00000259460 MON2Q7Z3U7 1717 aa21.11■□□□□ 0.97
RABEPK-201ENST00000259460 ARFGEF1Q9Y6D6 1849 aa21.11■□□□□ 0.97
RABEPK-201ENST00000259460 SMIM5Q71RC9 77 aa21.1■□□□□ 0.97
RABEPK-201ENST00000259460 NSD3Q9BZ95 1437 aa21.09■□□□□ 0.97
RABEPK-201ENST00000259460 PALLDQ8WX93 1383 aa21.08■□□□□ 0.97
RABEPK-201ENST00000259460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.07■□□□□ 0.96
RABEPK-201ENST00000259460 FCHSD2O94868 740 aa21.07■□□□□ 0.96
RABEPK-201ENST00000259460 A0A0G2JLW4 131 aa21.06■□□□□ 0.96
RABEPK-201ENST00000259460 ZNF692Q9BU19 519 aaPredicted RBP21.06■□□□□ 0.96
RABEPK-201ENST00000259460 RNF181Q9P0P0 153 aa21.05■□□□□ 0.96
RABEPK-201ENST00000259460 MEGF6O75095 1541 aa21.05■□□□□ 0.96
RABEPK-201ENST00000259460 KTN1Q86UP2 1357 aaKnown RBP21.05■□□□□ 0.96
RABEPK-201ENST00000259460 RGPD2P0DJD1 1756 aa21.05■□□□□ 0.96
RABEPK-201ENST00000259460 FOXN1O15353 648 aa21.04■□□□□ 0.96
RABEPK-201ENST00000259460 HMGB2P26583 209 aaKnown RBP21.04■□□□□ 0.96
RABEPK-201ENST00000259460 TGFB2P61812 414 aa21.04■□□□□ 0.96
RABEPK-201ENST00000259460 PRDM10Q9NQV6 1147 aa21.04■□□□□ 0.96
RABEPK-201ENST00000259460 USP31Q70CQ4 1352 aa21.03■□□□□ 0.96
RABEPK-201ENST00000259460 MMP10P09238 476 aa21.03■□□□□ 0.96
RABEPK-201ENST00000259460 ZCRB1Q8TBF4 217 aaKnown RBP21.03■□□□□ 0.96
RABEPK-201ENST00000259460 LTV1Q96GA3 475 aaPredicted RBP21.03■□□□□ 0.96
RABEPK-201ENST00000259460 NBPF1Q3BBV0 1214 aa21.02■□□□□ 0.95
RABEPK-201ENST00000259460 SBF1O95248 1867 aa21.01■□□□□ 0.95
RABEPK-201ENST00000259460 DPEP1P16444 411 aa21.01■□□□□ 0.95
RABEPK-201ENST00000259460 SSFA2P28290 1259 aa21.01■□□□□ 0.95
RABEPK-201ENST00000259460 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.01■□□□□ 0.95
RABEPK-201ENST00000259460 EVC2Q86UK5 1308 aa20.99■□□□□ 0.95
RABEPK-201ENST00000259460 C4AP0C0L4 1744 aa20.99■□□□□ 0.95
RABEPK-201ENST00000259460 MLLT1Q03111 559 aaPredicted RBP20.99■□□□□ 0.95
RABEPK-201ENST00000259460 MKRN1Q9UHC7 482 aaKnown RBP20.99■□□□□ 0.95
RABEPK-201ENST00000259460 NME9Q86XW9 330 aa20.98■□□□□ 0.95
RABEPK-201ENST00000259460 ABHD8Q96I13 439 aa20.98■□□□□ 0.95
RABEPK-201ENST00000259460 ITGB4P16144 1822 aa20.97■□□□□ 0.95
RABEPK-201ENST00000259460 TIAM2Q8IVF5 1701 aa20.95■□□□□ 0.94
RABEPK-201ENST00000259460 CTCFP49711 727 aaPredicted RBP20.95■□□□□ 0.94
RABEPK-201ENST00000259460 AIDAQ96BJ3 306 aa20.95■□□□□ 0.94
RABEPK-201ENST00000259460 MAP2P11137 1827 aaKnown RBP20.95■□□□□ 0.94
RABEPK-201ENST00000259460 MPRIPQ6WCQ1 1025 aa20.94■□□□□ 0.94
RABEPK-201ENST00000259460 GNPATO15228 680 aa20.93■□□□□ 0.94
RABEPK-201ENST00000259460 IP6K1Q92551 441 aa20.93■□□□□ 0.94
RABEPK-201ENST00000259460 DCAF5Q96JK2 942 aa20.93■□□□□ 0.94
RABEPK-201ENST00000259460 CCDC87Q9NVE4 849 aa20.93■□□□□ 0.94
RABEPK-201ENST00000259460 VEGFAP15692 232 aaPredicted RBP20.92■□□□□ 0.94
RABEPK-201ENST00000259460 LINC00116Q8NCU8 138 aa20.92■□□□□ 0.94
RABEPK-201ENST00000259460 SMARCC1Q92922 1105 aaPredicted RBP20.91■□□□□ 0.94
RABEPK-201ENST00000259460 CREBZFQ9NS37 354 aa20.9■□□□□ 0.94
RABEPK-201ENST00000259460 SBNO2Q9Y2G9 1366 aa20.9■□□□□ 0.94
RABEPK-201ENST00000259460 KCNA3P22001 575 aa20.89■□□□□ 0.93
RABEPK-201ENST00000259460 LBX1P52954 281 aa20.89■□□□□ 0.93
RABEPK-201ENST00000259460 ZC3H4Q9UPT8 1303 aaKnown RBP20.89■□□□□ 0.93
RABEPK-201ENST00000259460 DALRD3Q5D0E6 543 aaKnown RBP20.88■□□□□ 0.93
RABEPK-201ENST00000259460 PIM2Q9P1W9 311 aa20.88■□□□□ 0.93
RABEPK-201ENST00000259460 CNTNAP1P78357 1384 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms