RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 UBR1Q8IWV7 1749 aa18.93■□□□□ 0.62
DDX56-201ENST00000258772 RAB3GAP1Q15042 981 aa18.92■□□□□ 0.62
DDX56-201ENST00000258772 ATP10DQ9P241 1426 aa18.92■□□□□ 0.62
DDX56-201ENST00000258772 NUTM2FA1L443 756 aa18.92■□□□□ 0.62
DDX56-201ENST00000258772 PTPRCP08575 1304 aa18.92■□□□□ 0.62
DDX56-201ENST00000258772 USP6P35125 1406 aa18.92■□□□□ 0.62
DDX56-201ENST00000258772 EIF5BO60841 1220 aaKnown RBP18.91■□□□□ 0.62
DDX56-201ENST00000258772 TTC22Q5TAA0 569 aa18.91■□□□□ 0.62
DDX56-201ENST00000258772 C16orf71Q8IYS4 520 aaPredicted RBP18.91■□□□□ 0.62
DDX56-201ENST00000258772 ARXQ96QS3 562 aa18.91■□□□□ 0.62
DDX56-201ENST00000258772 TOPAZ1Q8N9V7 1692 aa18.91■□□□□ 0.62
DDX56-201ENST00000258772 PEAK1Q9H792 1746 aa18.91■□□□□ 0.62
DDX56-201ENST00000258772 HSP90AA1P07900 732 aaKnown RBP18.91■□□□□ 0.62
DDX56-201ENST00000258772 CEP85Q6P2H3 762 aa18.91■□□□□ 0.62
DDX56-201ENST00000258772 RGPD1P0DJD0 1748 aa18.9■□□□□ 0.62
DDX56-201ENST00000258772 USP31Q70CQ4 1352 aa18.9■□□□□ 0.62
DDX56-201ENST00000258772 NALCNQ8IZF0 1738 aa18.9■□□□□ 0.62
DDX56-201ENST00000258772 GBP4Q96PP9 640 aa18.9■□□□□ 0.62
DDX56-201ENST00000258772 RTL1A6NKG5 1358 aa18.89■□□□□ 0.61
DDX56-201ENST00000258772 CRB1P82279 1406 aa18.89■□□□□ 0.61
DDX56-201ENST00000258772 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
DDX56-201ENST00000258772 LTKP29376 864 aa18.88■□□□□ 0.61
DDX56-201ENST00000258772 FOXD4L1Q9NU39 408 aa18.88■□□□□ 0.61
DDX56-201ENST00000258772 MSH6P52701 1360 aa18.88■□□□□ 0.61
DDX56-201ENST00000258772 MEIS3Q99687 375 aa18.88■□□□□ 0.61
DDX56-201ENST00000258772 OTUD7AQ8TE49 926 aaPredicted RBP18.87■□□□□ 0.61
DDX56-201ENST00000258772 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
DDX56-201ENST00000258772 PLEKHG1Q9ULL1 1385 aa18.87■□□□□ 0.61
DDX56-201ENST00000258772 SOX12O15370 315 aa18.86■□□□□ 0.61
DDX56-201ENST00000258772 MRE11P49959 708 aa18.86■□□□□ 0.61
DDX56-201ENST00000258772 GAS2L2Q8NHY3 880 aa18.86■□□□□ 0.61
DDX56-201ENST00000258772 USP26Q9BXU7 913 aa18.86■□□□□ 0.61
DDX56-201ENST00000258772 PANK2Q9BZ23 570 aa18.86■□□□□ 0.61
DDX56-201ENST00000258772 MIS18AQ9NYP9 233 aa18.86■□□□□ 0.61
DDX56-201ENST00000258772 MAP3K19Q56UN5 1328 aa18.85■□□□□ 0.61
DDX56-201ENST00000258772 RABEP1Q15276 862 aa18.85■□□□□ 0.61
DDX56-201ENST00000258772 ARHGEF10O15013 1369 aa18.85■□□□□ 0.61
DDX56-201ENST00000258772 FOXO3O43524 673 aa18.85■□□□□ 0.61
DDX56-201ENST00000258772 SMARCA5O60264 1052 aaPredicted RBP18.85■□□□□ 0.61
DDX56-201ENST00000258772 MTHFSDQ2M296 383 aaKnown RBP18.85■□□□□ 0.61
DDX56-201ENST00000258772 SKOR2Q2VWA4 1001 aaPredicted RBP18.84■□□□□ 0.61
DDX56-201ENST00000258772 ISY1Q9ULR0 285 aaKnown RBP18.84■□□□□ 0.61
DDX56-201ENST00000258772 SDSP20132 328 aa18.84■□□□□ 0.61
DDX56-201ENST00000258772 PTMSP20962 102 aa18.84■□□□□ 0.61
DDX56-201ENST00000258772 RTF1Q92541 710 aaKnown RBP18.84■□□□□ 0.61
DDX56-201ENST00000258772 TTC21AQ8NDW8 1320 aa18.83■□□□□ 0.61
DDX56-201ENST00000258772 PTPRUQ92729 1446 aa18.83■□□□□ 0.61
DDX56-201ENST00000258772 SLC26A8Q96RN1 970 aa18.83■□□□□ 0.61
DDX56-201ENST00000258772 RRAGDQ9NQL2 400 aaPredicted RBP18.83■□□□□ 0.61
DDX56-201ENST00000258772 KIF13AQ9H1H9 1805 aa18.83■□□□□ 0.6
DDX56-201ENST00000258772 APBB1O00213 710 aa18.83■□□□□ 0.6
DDX56-201ENST00000258772 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.83■□□□□ 0.6
DDX56-201ENST00000258772 TSPYL4Q9UJ04 414 aa18.83■□□□□ 0.6
DDX56-201ENST00000258772 G2E3Q7L622 706 aa18.82■□□□□ 0.6
DDX56-201ENST00000258772 GRPEL1Q9HAV7 217 aa18.82■□□□□ 0.6
DDX56-201ENST00000258772 FMN2Q9NZ56 1722 aa18.82■□□□□ 0.6
DDX56-201ENST00000258772 HMMRO75330 724 aa18.81■□□□□ 0.6
DDX56-201ENST00000258772 SSFA2P28290 1259 aa18.81■□□□□ 0.6
DDX56-201ENST00000258772 CLEC17AQ6ZS10 378 aa18.81■□□□□ 0.6
DDX56-201ENST00000258772 FLT4P35916 1363 aa18.81■□□□□ 0.6
DDX56-201ENST00000258772 KDRP35968 1356 aa18.81■□□□□ 0.6
DDX56-201ENST00000258772 SBNO1A3KN83 1393 aa18.8■□□□□ 0.6
DDX56-201ENST00000258772 CASC1Q6TDU7 716 aa18.8■□□□□ 0.6
DDX56-201ENST00000258772 SLC4A10Q6U841 1118 aa18.8■□□□□ 0.6
DDX56-201ENST00000258772 AK9Q5TCS8 1911 aa18.8■□□□□ 0.6
DDX56-201ENST00000258772 F6X3S4 739 aa18.8■□□□□ 0.6
DDX56-201ENST00000258772 CCT4P50991 539 aaKnown RBP18.8■□□□□ 0.6
DDX56-201ENST00000258772 RIMS1Q86UR5 1692 aaKnown RBP18.8■□□□□ 0.6
DDX56-201ENST00000258772 AMOTL2Q9Y2J4 779 aa18.79■□□□□ 0.6
DDX56-201ENST00000258772 EYA1Q99502 592 aa18.79■□□□□ 0.6
DDX56-201ENST00000258772 AMPHP49418 695 aa18.78■□□□□ 0.6
DDX56-201ENST00000258772 NGDNQ8NEJ9 315 aaKnown RBP18.78■□□□□ 0.6
DDX56-201ENST00000258772 OSBPL3Q9H4L5 887 aa18.78■□□□□ 0.6
DDX56-201ENST00000258772 EID1Q9Y6B2 187 aa18.78■□□□□ 0.6
DDX56-201ENST00000258772 IGSF1Q8N6C5 1336 aa18.78■□□□□ 0.6
DDX56-201ENST00000258772 GOLGA6L22H0YM25 854 aa18.77■□□□□ 0.59
DDX56-201ENST00000258772 GAS2L3Q86XJ1 694 aa18.77■□□□□ 0.59
DDX56-201ENST00000258772 RGPD8O14715 1765 aaPredicted RBP18.76■□□□□ 0.59
DDX56-201ENST00000258772 REC8O95072 547 aa18.76■□□□□ 0.59
DDX56-201ENST00000258772 BAG4O95429 457 aaKnown RBP18.76■□□□□ 0.59
DDX56-201ENST00000258772 CEP170BQ9Y4F5 1589 aaPredicted RBP18.76■□□□□ 0.59
DDX56-201ENST00000258772 PDE1AP54750 535 aa18.75■□□□□ 0.59
DDX56-201ENST00000258772 STK31Q9BXU1 1019 aa18.75■□□□□ 0.59
DDX56-201ENST00000258772 HTATSF1O43719 755 aaKnown RBP18.75■□□□□ 0.59
DDX56-201ENST00000258772 GNAI2P04899 355 aa18.75■□□□□ 0.59
DDX56-201ENST00000258772 CEBPAP49715 358 aaPredicted RBP18.75■□□□□ 0.59
DDX56-201ENST00000258772 TBX22Q9Y458 520 aa18.75■□□□□ 0.59
DDX56-201ENST00000258772 ERC2O15083 957 aa18.74■□□□□ 0.59
DDX56-201ENST00000258772 NUCB2P80303 420 aa18.74■□□□□ 0.59
DDX56-201ENST00000258772 ST18O60284 1047 aa18.73■□□□□ 0.59
DDX56-201ENST00000258772 CYP2E1P05181 493 aaPredicted RBP18.72■□□□□ 0.59
DDX56-201ENST00000258772 FLIIQ13045 1269 aa18.72■□□□□ 0.59
DDX56-201ENST00000258772 CCDC30Q5VVM6 783 aa18.72■□□□□ 0.59
DDX56-201ENST00000258772 CACNA1FO60840 1977 aa18.72■□□□□ 0.59
DDX56-201ENST00000258772 PIK3C2AO00443 1686 aa18.72■□□□□ 0.59
DDX56-201ENST00000258772 NLRP6P59044 892 aa18.72■□□□□ 0.59
DDX56-201ENST00000258772 KLHL40Q2TBA0 621 aa18.72■□□□□ 0.59
DDX56-201ENST00000258772 CWC22Q9HCG8 908 aaKnown RBP18.72■□□□□ 0.59
DDX56-201ENST00000258772 EXOC6BQ9Y2D4 811 aa18.72■□□□□ 0.59
DDX56-201ENST00000258772 DIP2AQ14689 1571 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms