RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 RAPGEF4Q8WZA2 1011 aa26.72■■□□□ 1.87
SNRPA-201ENST00000243563 GJD4Q96KN9 370 aaPredicted RBP26.72■■□□□ 1.87
SNRPA-201ENST00000243563 APAF1O14727 1248 aa26.71■■□□□ 1.87
SNRPA-201ENST00000243563 FAM98CQ17RN3 349 aaKnown RBP26.71■■□□□ 1.87
SNRPA-201ENST00000243563 MTHFSDQ2M296 383 aaKnown RBP26.71■■□□□ 1.87
SNRPA-201ENST00000243563 RRP7AQ9Y3A4 280 aaKnown RBP26.71■■□□□ 1.87
SNRPA-201ENST00000243563 TATP17735 454 aaPredicted RBP26.7■■□□□ 1.86
SNRPA-201ENST00000243563 ZNF772Q68DY9 489 aaPredicted RBP26.69■■□□□ 1.86
SNRPA-201ENST00000243563 BARGINQ6ZT62 677 aa26.68■■□□□ 1.86
SNRPA-201ENST00000243563 THRAP3Q9Y2W1 955 aaKnown RBP26.68■■□□□ 1.86
SNRPA-201ENST00000243563 MAPK8IP3Q9UPT6 1336 aa26.68■■□□□ 1.86
SNRPA-201ENST00000243563 POTEAQ6S8J7 498 aa26.68■■□□□ 1.86
SNRPA-201ENST00000243563 BRWD3Q6RI45 1802 aa26.67■■□□□ 1.86
SNRPA-201ENST00000243563 PNNQ9H307 717 aaKnown RBP26.65■■□□□ 1.86
SNRPA-201ENST00000243563 TMPOP42166 694 aaKnown RBP26.65■■□□□ 1.86
SNRPA-201ENST00000243563 YTHDC1Q96MU7 727 aaKnown RBP26.65■■□□□ 1.86
SNRPA-201ENST00000243563 PHF23Q9BUL5 403 aaPredicted RBP26.65■■□□□ 1.86
SNRPA-201ENST00000243563 SALL2Q9Y467 1007 aaPredicted RBP26.65■■□□□ 1.86
SNRPA-201ENST00000243563 TNS2Q63HR2 1409 aa26.64■■□□□ 1.86
SNRPA-201ENST00000243563 NEUROD2Q15784 382 aa26.64■■□□□ 1.85
SNRPA-201ENST00000243563 NFE2L2Q16236 605 aa26.64■■□□□ 1.85
SNRPA-201ENST00000243563 PLEKHO1Q53GL0 409 aaPredicted RBP26.62■■□□□ 1.85
SNRPA-201ENST00000243563 ZCRB1Q8TBF4 217 aaKnown RBP26.62■■□□□ 1.85
SNRPA-201ENST00000243563 CYP27B1O15528 508 aa26.61■■□□□ 1.85
SNRPA-201ENST00000243563 HNRNPUQ00839 825 aaKnown RBP eCLIP26.61■■□□□ 1.85
SNRPA-201ENST00000243563 ZNF530Q6P9A1 599 aaPredicted RBP26.61■■□□□ 1.85
SNRPA-201ENST00000243563 PLEKHG2Q9H7P9 1386 aa26.61■■□□□ 1.85
SNRPA-201ENST00000243563 TOGARAM1Q9Y4F4 1720 aa26.61■■□□□ 1.85
SNRPA-201ENST00000243563 ADAMTS7Q9UKP4 1686 aa26.6■■□□□ 1.85
SNRPA-201ENST00000243563 ONECUT3O60422 494 aaPredicted RBP26.6■■□□□ 1.85
SNRPA-201ENST00000243563 AMOTQ4VCS5 1084 aa26.6■■□□□ 1.85
SNRPA-201ENST00000243563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.6■■□□□ 1.85
SNRPA-201ENST00000243563 SCN11AQ9UI33 1791 aa26.6■■□□□ 1.85
SNRPA-201ENST00000243563 TRIM35Q9UPQ4 493 aa26.59■■□□□ 1.85
SNRPA-201ENST00000243563 NEFMP07197 916 aa26.58■■□□□ 1.85
SNRPA-201ENST00000243563 RIPK4P57078 832 aa26.58■■□□□ 1.85
SNRPA-201ENST00000243563 RBM6P78332 1123 aaKnown RBP26.58■■□□□ 1.85
SNRPA-201ENST00000243563 CDCA7Q9BWT1 371 aaPredicted RBP26.58■■□□□ 1.85
SNRPA-201ENST00000243563 SPG7Q9UQ90 795 aa26.58■■□□□ 1.85
SNRPA-201ENST00000243563 GAS2L2Q8NHY3 880 aa26.57■■□□□ 1.84
SNRPA-201ENST00000243563 MAP3K5Q99683 1374 aa26.57■■□□□ 1.84
SNRPA-201ENST00000243563 PHKG2P15735 406 aa26.57■■□□□ 1.84
SNRPA-201ENST00000243563 DCTN1Q14203 1278 aa26.57■■□□□ 1.84
SNRPA-201ENST00000243563 DDX54Q8TDD1 881 aaKnown RBP26.57■■□□□ 1.84
SNRPA-201ENST00000243563 A0A0G2JS52 829 aa26.56■■□□□ 1.84
SNRPA-201ENST00000243563 MYT1Q01538 1121 aa26.56■■□□□ 1.84
SNRPA-201ENST00000243563 DDB1Q16531 1140 aa26.56■■□□□ 1.84
SNRPA-201ENST00000243563 SEPT12Q8IYM1 358 aa26.56■■□□□ 1.84
SNRPA-201ENST00000243563 RGS12O14924 1447 aa26.56■■□□□ 1.84
SNRPA-201ENST00000243563 KDM6AO15550 1401 aaPredicted RBP26.56■■□□□ 1.84
SNRPA-201ENST00000243563 PCDH11XQ9BZA7 1347 aa26.55■■□□□ 1.84
SNRPA-201ENST00000243563 PCDH11YQ9BZA8 1340 aa26.55■■□□□ 1.84
SNRPA-201ENST00000243563 EXOC5O00471 708 aa26.55■■□□□ 1.84
SNRPA-201ENST00000243563 THUMPD2Q9BTF0 503 aaKnown RBP26.55■■□□□ 1.84
SNRPA-201ENST00000243563 DOT1LQ8TEK3 1739 aa26.54■■□□□ 1.84
SNRPA-201ENST00000243563 AKAP4Q5JQC9 854 aa26.54■■□□□ 1.84
SNRPA-201ENST00000243563 MARCH10Q8NA82 808 aaPredicted RBP26.54■■□□□ 1.84
SNRPA-201ENST00000243563 SIPA1L3O60292 1781 aaPredicted RBP26.53■■□□□ 1.84
SNRPA-201ENST00000243563 RXRBP28702 533 aa26.53■■□□□ 1.84
SNRPA-201ENST00000243563 MPRIPQ6WCQ1 1025 aa26.53■■□□□ 1.84
SNRPA-201ENST00000243563 MCM10Q7L590 875 aa26.53■■□□□ 1.84
SNRPA-201ENST00000243563 GNAT3A8MTJ3 354 aa26.52■■□□□ 1.84
SNRPA-201ENST00000243563 IFNL2Q8IZJ0 200 aa26.52■■□□□ 1.84
SNRPA-201ENST00000243563 LGR6Q9HBX8 967 aa26.52■■□□□ 1.84
SNRPA-201ENST00000243563 IL17REQ8NFR9 667 aa26.51■■□□□ 1.83
SNRPA-201ENST00000243563 ITGB4P16144 1822 aa26.51■■□□□ 1.83
SNRPA-201ENST00000243563 ZNF521Q96K83 1311 aa26.51■■□□□ 1.83
SNRPA-201ENST00000243563 C1orf141Q5JVX7 400 aa26.5■■□□□ 1.83
SNRPA-201ENST00000243563 WWC1Q8IX03 1113 aa26.5■■□□□ 1.83
SNRPA-201ENST00000243563 FAM182BQ5T319 152 aa26.5■■□□□ 1.83
SNRPA-201ENST00000243563 CCDC27Q2M243 656 aa26.48■■□□□ 1.83
SNRPA-201ENST00000243563 SBF2Q86WG5 1849 aa26.47■■□□□ 1.83
SNRPA-201ENST00000243563 CEMIPQ8WUJ3 1361 aa26.47■■□□□ 1.83
SNRPA-201ENST00000243563 RNMTO43148 476 aaKnown RBP26.47■■□□□ 1.83
SNRPA-201ENST00000243563 NKX1-1Q15270 411 aaPredicted RBP26.47■■□□□ 1.83
SNRPA-201ENST00000243563 ZBED9Q6R2W3 1325 aa26.46■■□□□ 1.83
SNRPA-201ENST00000243563 MRC1P22897 1456 aa26.45■■□□□ 1.82
SNRPA-201ENST00000243563 NCBP3Q53F19 620 aaKnown RBP26.45■■□□□ 1.82
SNRPA-201ENST00000243563 SPINK5Q9NQ38 1064 aaPredicted RBP26.45■■□□□ 1.82
SNRPA-201ENST00000243563 HTATSF1O43719 755 aaKnown RBP26.44■■□□□ 1.82
SNRPA-201ENST00000243563 KAT6BQ8WYB5 2073 aa26.43■■□□□ 1.82
SNRPA-201ENST00000243563 PDE3BQ13370 1112 aa26.43■■□□□ 1.82
SNRPA-201ENST00000243563 RTF1Q92541 710 aaKnown RBP26.43■■□□□ 1.82
SNRPA-201ENST00000243563 DCAF5Q96JK2 942 aa26.43■■□□□ 1.82
SNRPA-201ENST00000243563 LMOD3Q0VAK6 560 aa26.42■■□□□ 1.82
SNRPA-201ENST00000243563 CDCA7LQ96GN5 454 aa26.42■■□□□ 1.82
SNRPA-201ENST00000243563 KDM3BQ7LBC6 1761 aa26.41■■□□□ 1.82
SNRPA-201ENST00000243563 NGEFQ8N5V2 710 aa26.4■■□□□ 1.82
SNRPA-201ENST00000243563 HSP90AB1P08238 724 aaKnown RBP26.39■■□□□ 1.82
SNRPA-201ENST00000243563 KRT27Q7Z3Y8 459 aa26.39■■□□□ 1.82
SNRPA-201ENST00000243563 NHSQ6T4R5 1651 aa26.39■■□□□ 1.82
SNRPA-201ENST00000243563 PAPPAQ13219 1627 aa26.38■■□□□ 1.81
SNRPA-201ENST00000243563 ACSBG1Q96GR2 724 aa26.38■■□□□ 1.81
SNRPA-201ENST00000243563 EP400Q96L91 3159 aa26.38■■□□□ 1.81
SNRPA-201ENST00000243563 MIS18AQ9NYP9 233 aa26.37■■□□□ 1.81
SNRPA-201ENST00000243563 PTF1AQ7RTS3 328 aa26.36■■□□□ 1.81
SNRPA-201ENST00000243563 WDR63Q8IWG1 891 aa26.36■■□□□ 1.81
SNRPA-201ENST00000243563 SLC52A2Q9HAB3 445 aa26.36■■□□□ 1.81
SNRPA-201ENST00000243563 KCNQ2O43526 872 aa26.35■■□□□ 1.81
SNRPA-201ENST00000243563 NFATC2IPQ8NCF5 419 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms