RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 GNAI1P63096 354 aa14.9□□□□□ -0.02
SEC61A1-201ENST00000243253 RBM33Q96EV2 1170 aaKnown RBP14.9□□□□□ -0.02
SEC61A1-201ENST00000243253 FAM208AQ9UK61 1670 aaKnown RBP14.9□□□□□ -0.02
SEC61A1-201ENST00000243253 METP08581 1390 aa14.9□□□□□ -0.02
SEC61A1-201ENST00000243253 DIP2BQ9P265 1576 aa14.9□□□□□ -0.02
SEC61A1-201ENST00000243253 TWISTNBQ3B726 338 aaPredicted RBP14.89□□□□□ -0.03
SEC61A1-201ENST00000243253 FAM83GA6ND36 823 aa14.88□□□□□ -0.03
SEC61A1-201ENST00000243253 NME9Q86XW9 330 aa14.88□□□□□ -0.03
SEC61A1-201ENST00000243253 CRB1P82279 1406 aa14.88□□□□□ -0.03
SEC61A1-201ENST00000243253 UBR1Q8IWV7 1749 aa14.88□□□□□ -0.03
SEC61A1-201ENST00000243253 OVOS2A0A0J9YW53 1432 aa14.88□□□□□ -0.03
SEC61A1-201ENST00000243253 OVOS2Q6IE36 1432 aa14.88□□□□□ -0.03
SEC61A1-201ENST00000243253 LTV1Q96GA3 475 aaPredicted RBP14.87□□□□□ -0.03
SEC61A1-201ENST00000243253 USP26Q9BXU7 913 aa14.87□□□□□ -0.03
SEC61A1-201ENST00000243253 TTC22Q5TAA0 569 aa14.87□□□□□ -0.03
SEC61A1-201ENST00000243253 SSFA2P28290 1259 aa14.86□□□□□ -0.03
SEC61A1-201ENST00000243253 MIS18AQ9NYP9 233 aa14.86□□□□□ -0.03
SEC61A1-201ENST00000243253 WASLO00401 505 aaPredicted RBP14.86□□□□□ -0.03
SEC61A1-201ENST00000243253 RTL1A6NKG5 1358 aa14.86□□□□□ -0.03
SEC61A1-201ENST00000243253 PPP1R9BQ96SB3 815 aa14.86□□□□□ -0.03
SEC61A1-201ENST00000243253 SSH2Q76I76 1423 aa14.85□□□□□ -0.03
SEC61A1-201ENST00000243253 CDC45O75419 566 aa14.85□□□□□ -0.03
SEC61A1-201ENST00000243253 CALD1Q05682 793 aaKnown RBP14.85□□□□□ -0.03
SEC61A1-201ENST00000243253 C16orf71Q8IYS4 520 aaPredicted RBP14.85□□□□□ -0.03
SEC61A1-201ENST00000243253 ANKRD44Q8N8A2 993 aa14.85□□□□□ -0.03
SEC61A1-201ENST00000243253 KIAA0232Q92628 1395 aa14.85□□□□□ -0.03
SEC61A1-201ENST00000243253 PRR36Q9H6K5 1346 aa14.84□□□□□ -0.03
SEC61A1-201ENST00000243253 OTUD7AQ8TE49 926 aaPredicted RBP14.84□□□□□ -0.03
SEC61A1-201ENST00000243253 CHMP4BQ9H444 224 aaKnown RBP14.84□□□□□ -0.03
SEC61A1-201ENST00000243253 CHL1O00533 1208 aa14.84□□□□□ -0.03
SEC61A1-201ENST00000243253 SALL3Q9BXA9 1300 aa14.84□□□□□ -0.03
SEC61A1-201ENST00000243253 USP54Q70EL1 1684 aa14.84□□□□□ -0.03
SEC61A1-201ENST00000243253 KRT24Q2M2I5 525 aa14.84□□□□□ -0.03
SEC61A1-201ENST00000243253 SKOR2Q2VWA4 1001 aaPredicted RBP14.84□□□□□ -0.03
SEC61A1-201ENST00000243253 CEP85Q6P2H3 762 aa14.84□□□□□ -0.03
SEC61A1-201ENST00000243253 SIRT1Q96EB6 747 aa14.84□□□□□ -0.03
SEC61A1-201ENST00000243253 MSH6P52701 1360 aa14.83□□□□□ -0.03
SEC61A1-201ENST00000243253 BAG4O95429 457 aaKnown RBP14.83□□□□□ -0.04
SEC61A1-201ENST00000243253 KLHL40Q2TBA0 621 aa14.83□□□□□ -0.04
SEC61A1-201ENST00000243253 SLC4A10Q6U841 1118 aa14.83□□□□□ -0.04
SEC61A1-201ENST00000243253 ZDHHC9Q9Y397 364 aa14.83□□□□□ -0.04
SEC61A1-201ENST00000243253 CRYBG1Q9Y4K1 1723 aa14.83□□□□□ -0.04
SEC61A1-201ENST00000243253 PKP1Q13835 747 aa14.83□□□□□ -0.04
SEC61A1-201ENST00000243253 CACNA1FO60840 1977 aa14.82□□□□□ -0.04
SEC61A1-201ENST00000243253 ESPNB1AK53 854 aa14.82□□□□□ -0.04
SEC61A1-201ENST00000243253 GBP4Q96PP9 640 aa14.82□□□□□ -0.04
SEC61A1-201ENST00000243253 API5Q9BZZ5 524 aaKnown RBP14.82□□□□□ -0.04
SEC61A1-201ENST00000243253 HSP90AB1P08238 724 aaKnown RBP14.82□□□□□ -0.04
SEC61A1-201ENST00000243253 FOXD4L5Q5VV16 416 aaPredicted RBP14.82□□□□□ -0.04
SEC61A1-201ENST00000243253 LMOD2Q6P5Q4 547 aa14.82□□□□□ -0.04
SEC61A1-201ENST00000243253 FOXD4L4Q8WXT5 416 aaPredicted RBP14.82□□□□□ -0.04
SEC61A1-201ENST00000243253 SLC26A8Q96RN1 970 aa14.82□□□□□ -0.04
SEC61A1-201ENST00000243253 USP31Q70CQ4 1352 aa14.81□□□□□ -0.04
SEC61A1-201ENST00000243253 NOL8Q76FK4 1167 aaKnown RBP14.81□□□□□ -0.04
SEC61A1-201ENST00000243253 LMBRD1Q9NUN5 540 aa14.81□□□□□ -0.04
SEC61A1-201ENST00000243253 PPP6R1Q9UPN7 881 aa14.81□□□□□ -0.04
SEC61A1-201ENST00000243253 ZNF445P59923 1031 aa14.81□□□□□ -0.04
SEC61A1-201ENST00000243253 IL17RAQ96F46 866 aa14.8□□□□□ -0.04
SEC61A1-201ENST00000243253 AEBP1Q8IUX7 1158 aa14.8□□□□□ -0.04
SEC61A1-201ENST00000243253 OSBPL3Q9H4L5 887 aa14.8□□□□□ -0.04
SEC61A1-201ENST00000243253 RGPD8O14715 1765 aaPredicted RBP14.8□□□□□ -0.04
SEC61A1-201ENST00000243253 TSPOAP1O95153 1857 aa14.8□□□□□ -0.04
SEC61A1-201ENST00000243253 SDSP20132 328 aa14.8□□□□□ -0.04
SEC61A1-201ENST00000243253 PTMSP20962 102 aa14.79□□□□□ -0.04
SEC61A1-201ENST00000243253 CEBPAP49715 358 aaPredicted RBP14.79□□□□□ -0.04
SEC61A1-201ENST00000243253 EIF4A2Q14240 407 aaKnown RBP14.79□□□□□ -0.04
SEC61A1-201ENST00000243253 RABEP1Q15276 862 aa14.79□□□□□ -0.04
SEC61A1-201ENST00000243253 NWD1Q149M9 1564 aa14.79□□□□□ -0.04
SEC61A1-201ENST00000243253 NUDT16Q96DE0 195 aaKnown RBP14.79□□□□□ -0.04
SEC61A1-201ENST00000243253 PIK3C2AO00443 1686 aa14.79□□□□□ -0.04
SEC61A1-201ENST00000243253 LMOD3Q0VAK6 560 aa14.78□□□□□ -0.04
SEC61A1-201ENST00000243253 FOXD4L6Q3SYB3 417 aaPredicted RBP14.78□□□□□ -0.04
SEC61A1-201ENST00000243253 FOXD4L3Q6VB84 417 aaPredicted RBP14.78□□□□□ -0.04
SEC61A1-201ENST00000243253 ADAMTS13Q76LX8 1427 aa14.78□□□□□ -0.04
SEC61A1-201ENST00000243253 RPAP2Q8IXW5 612 aaPredicted RBP14.78□□□□□ -0.04
SEC61A1-201ENST00000243253 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.78□□□□□ -0.04
SEC61A1-201ENST00000243253 PTPRCP08575 1304 aa14.77□□□□□ -0.05
SEC61A1-201ENST00000243253 PDLIM2Q96JY6 352 aa14.77□□□□□ -0.05
SEC61A1-201ENST00000243253 DNAJC5Q9H3Z4 198 aa14.77□□□□□ -0.05
SEC61A1-201ENST00000243253 ROBO2Q9HCK4 1378 aa14.77□□□□□ -0.05
SEC61A1-201ENST00000243253 CEP170BQ9Y4F5 1589 aaPredicted RBP14.76□□□□□ -0.05
SEC61A1-201ENST00000243253 NCLP19338 710 aaKnown RBP14.76□□□□□ -0.05
SEC61A1-201ENST00000243253 CCDC61Q9Y6R9 512 aa14.76□□□□□ -0.05
SEC61A1-201ENST00000243253 KDRP35968 1356 aa14.76□□□□□ -0.05
SEC61A1-201ENST00000243253 MCM10Q7L590 875 aa14.76□□□□□ -0.05
SEC61A1-201ENST00000243253 GPT2Q8TD30 523 aa14.76□□□□□ -0.05
SEC61A1-201ENST00000243253 MEIS3Q99687 375 aa14.76□□□□□ -0.05
SEC61A1-201ENST00000243253 USP6P35125 1406 aa14.75□□□□□ -0.05
SEC61A1-201ENST00000243253 ZGPATQ8N5A5 531 aaKnown RBP14.75□□□□□ -0.05
SEC61A1-201ENST00000243253 SMARCA5O60264 1052 aaPredicted RBP14.74□□□□□ -0.05
SEC61A1-201ENST00000243253 COG3Q96JB2 828 aa14.74□□□□□ -0.05
SEC61A1-201ENST00000243253 ARHGEF10O15013 1369 aa14.74□□□□□ -0.05
SEC61A1-201ENST00000243253 CCDC173Q0VFZ6 552 aa14.74□□□□□ -0.05
SEC61A1-201ENST00000243253 ZSCAN23Q3MJ62 389 aa14.73□□□□□ -0.05
SEC61A1-201ENST00000243253 KIF13AQ9H1H9 1805 aa14.73□□□□□ -0.05
SEC61A1-201ENST00000243253 SULT6B1Q6IMI4 303 aa14.73□□□□□ -0.05
SEC61A1-201ENST00000243253 DTNBO60941 627 aa14.72□□□□□ -0.05
SEC61A1-201ENST00000243253 TSHZ3Q63HK5 1081 aa14.72□□□□□ -0.05
SEC61A1-201ENST00000243253 TCHHQ07283 1943 aa14.72□□□□□ -0.05
SEC61A1-201ENST00000243253 NSFL1CQ9UNZ2 370 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms