RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 NGEFQ8N5V2 710 aa19.48■□□□□ 0.71
DDX1-201ENST00000233084 RBM33Q96EV2 1170 aaKnown RBP19.48■□□□□ 0.71
DDX1-201ENST00000233084 AKAP12Q02952 1782 aa19.47■□□□□ 0.71
DDX1-201ENST00000233084 DNTTIP2Q5QJE6 756 aaKnown RBP19.47■□□□□ 0.71
DDX1-201ENST00000233084 PDLIM2Q96JY6 352 aa19.47■□□□□ 0.71
DDX1-201ENST00000233084 IBTKQ9P2D0 1353 aaPredicted RBP19.47■□□□□ 0.71
DDX1-201ENST00000233084 NPC1L1Q9UHC9 1359 aa19.47■□□□□ 0.71
DDX1-201ENST00000233084 ITSN1Q15811 1721 aa19.47■□□□□ 0.71
DDX1-201ENST00000233084 ADGRL3Q9HAR2 1447 aa19.46■□□□□ 0.71
DDX1-201ENST00000233084 MPNDQ8N594 471 aa19.45■□□□□ 0.7
DDX1-201ENST00000233084 SMC4Q9NTJ3 1288 aa19.45■□□□□ 0.7
DDX1-201ENST00000233084 MON2Q7Z3U7 1717 aa19.45■□□□□ 0.7
DDX1-201ENST00000233084 RNF214Q8ND24 703 aa19.45■□□□□ 0.7
DDX1-201ENST00000233084 BBXQ8WY36 941 aaPredicted RBP19.45■□□□□ 0.7
DDX1-201ENST00000233084 CCDC61Q9Y6R9 512 aa19.45■□□□□ 0.7
DDX1-201ENST00000233084 HDAC1Q13547 482 aaPredicted RBP19.44■□□□□ 0.7
DDX1-201ENST00000233084 TSR2Q969E8 191 aaKnown RBP19.44■□□□□ 0.7
DDX1-201ENST00000233084 RUNDC1Q96C34 613 aa19.44■□□□□ 0.7
DDX1-201ENST00000233084 NUTM2FA1L443 756 aa19.44■□□□□ 0.7
DDX1-201ENST00000233084 FAM177BA6PVY3 158 aa19.44■□□□□ 0.7
DDX1-201ENST00000233084 PKP1Q13835 747 aa19.44■□□□□ 0.7
DDX1-201ENST00000233084 CPSF1Q10570 1443 aaKnown RBP19.43■□□□□ 0.7
DDX1-201ENST00000233084 TRIM27P14373 513 aa19.43■□□□□ 0.7
DDX1-201ENST00000233084 UTP14CQ5TAP6 766 aaKnown RBP19.43■□□□□ 0.7
DDX1-201ENST00000233084 PRPF40AO75400 957 aaKnown RBP19.43■□□□□ 0.7
DDX1-201ENST00000233084 TERF2IPQ9NYB0 399 aa19.43■□□□□ 0.7
DDX1-201ENST00000233084 PTMAP06454 111 aaKnown RBP19.42■□□□□ 0.7
DDX1-201ENST00000233084 CHAMP1Q96JM3 812 aa19.42■□□□□ 0.7
DDX1-201ENST00000233084 LMBRD1Q9NUN5 540 aa19.42■□□□□ 0.7
DDX1-201ENST00000233084 XIRP1Q702N8 1843 aaKnown RBP19.42■□□□□ 0.7
DDX1-201ENST00000233084 KIF20BQ96Q89 1820 aa19.42■□□□□ 0.7
DDX1-201ENST00000233084 PDE4CQ08493 712 aa19.41■□□□□ 0.7
DDX1-201ENST00000233084 SYCE3A1L190 88 aa19.41■□□□□ 0.7
DDX1-201ENST00000233084 CCDC39Q9UFE4 941 aa19.41■□□□□ 0.7
DDX1-201ENST00000233084 ANKRD26Q9UPS8 1709 aa19.4■□□□□ 0.7
DDX1-201ENST00000233084 ANKARQ7Z5J8 1434 aa19.4■□□□□ 0.7
DDX1-201ENST00000233084 HDGFL2Q7Z4V5 671 aaPredicted RBP19.4■□□□□ 0.7
DDX1-201ENST00000233084 PROSER2Q86WR7 435 aaPredicted RBP19.4■□□□□ 0.7
DDX1-201ENST00000233084 WDR63Q8IWG1 891 aa19.39■□□□□ 0.7
DDX1-201ENST00000233084 DDX19BQ9UMR2 479 aa19.39■□□□□ 0.7
DDX1-201ENST00000233084 NRKQ7Z2Y5 1582 aa19.39■□□□□ 0.69
DDX1-201ENST00000233084 NUCB1Q02818 461 aa19.38■□□□□ 0.69
DDX1-201ENST00000233084 PPP4R3BQ5MIZ7 849 aa19.38■□□□□ 0.69
DDX1-201ENST00000233084 GPT2Q8TD30 523 aa19.38■□□□□ 0.69
DDX1-201ENST00000233084 CLEC17AQ6ZS10 378 aa19.38■□□□□ 0.69
DDX1-201ENST00000233084 TBC1D9Q6ZT07 1266 aa19.38■□□□□ 0.69
DDX1-201ENST00000233084 CHD1LQ86WJ1 897 aa19.38■□□□□ 0.69
DDX1-201ENST00000233084 TMEM57Q8N5G2 664 aa19.38■□□□□ 0.69
DDX1-201ENST00000233084 PLEKHG3A1L390 1219 aa19.37■□□□□ 0.69
DDX1-201ENST00000233084 FOXD4L5Q5VV16 416 aaPredicted RBP19.37■□□□□ 0.69
DDX1-201ENST00000233084 FOXD4L4Q8WXT5 416 aaPredicted RBP19.37■□□□□ 0.69
DDX1-201ENST00000233084 KIF16BQ96L93 1317 aa19.37■□□□□ 0.69
DDX1-201ENST00000233084 TMEM94Q12767 1356 aa19.37■□□□□ 0.69
DDX1-201ENST00000233084 IGSF3O75054 1194 aa19.37■□□□□ 0.69
DDX1-201ENST00000233084 MCM5P33992 734 aa19.37■□□□□ 0.69
DDX1-201ENST00000233084 ANKRD45Q5TZF3 282 aa19.37■□□□□ 0.69
DDX1-201ENST00000233084 ZNF710Q8N1W2 664 aa19.37■□□□□ 0.69
DDX1-201ENST00000233084 NOB1Q9ULX3 412 aaKnown RBP19.36■□□□□ 0.69
DDX1-201ENST00000233084 EXOSC9Q06265 439 aaKnown RBP19.36■□□□□ 0.69
DDX1-201ENST00000233084 KIAA2012Q0VF49 1180 aa19.36■□□□□ 0.69
DDX1-201ENST00000233084 SSH1Q8WYL5 1049 aa19.36■□□□□ 0.69
DDX1-201ENST00000233084 NSD2O96028 1365 aa19.35■□□□□ 0.69
DDX1-201ENST00000233084 EDC4Q6P2E9 1401 aaKnown RBP19.35■□□□□ 0.69
DDX1-201ENST00000233084 SPDYE4A6NLX3 237 aa19.35■□□□□ 0.69
DDX1-201ENST00000233084 ATP2B3Q16720 1220 aa19.35■□□□□ 0.69
DDX1-201ENST00000233084 MORC1Q86VD1 984 aa19.35■□□□□ 0.69
DDX1-201ENST00000233084 MYRIPQ8NFW9 859 aa19.35■□□□□ 0.69
DDX1-201ENST00000233084 ZNF830Q96NB3 372 aaPredicted RBP19.35■□□□□ 0.69
DDX1-201ENST00000233084 TMEM63CQ9P1W3 806 aa19.35■□□□□ 0.69
DDX1-201ENST00000233084 NSFL1CQ9UNZ2 370 aaKnown RBP19.35■□□□□ 0.69
DDX1-201ENST00000233084 ZNF335Q9H4Z2 1342 aaPredicted RBP19.35■□□□□ 0.69
DDX1-201ENST00000233084 C14orf37Q86TY3 774 aa19.35■□□□□ 0.69
DDX1-201ENST00000233084 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.35■□□□□ 0.69
DDX1-201ENST00000233084 ACEP12821 1306 aa19.35■□□□□ 0.69
DDX1-201ENST00000233084 BMP2KLQ5H9B9 411 aa19.34■□□□□ 0.69
DDX1-201ENST00000233084 ATF7IPQ6VMQ6 1270 aa19.34■□□□□ 0.69
DDX1-201ENST00000233084 GTF2E1P29083 439 aaPredicted RBP19.34■□□□□ 0.69
DDX1-201ENST00000233084 NUCB2P80303 420 aa19.33■□□□□ 0.69
DDX1-201ENST00000233084 LRSAM1Q6UWE0 723 aa19.33■□□□□ 0.69
DDX1-201ENST00000233084 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.69
DDX1-201ENST00000233084 POLR3AO14802 1390 aaPredicted RBP19.33■□□□□ 0.69
DDX1-201ENST00000233084 LRRC7Q96NW7 1537 aa19.32■□□□□ 0.68
DDX1-201ENST00000233084 FYB1O15117 783 aa19.32■□□□□ 0.68
DDX1-201ENST00000233084 C17orf53Q8N3J3 647 aaPredicted RBP19.32■□□□□ 0.68
DDX1-201ENST00000233084 ZBTB40Q9NUA8 1239 aa19.32■□□□□ 0.68
DDX1-201ENST00000233084 USP6P35125 1406 aa19.32■□□□□ 0.68
DDX1-201ENST00000233084 ZGPATQ8N5A5 531 aaKnown RBP19.31■□□□□ 0.68
DDX1-201ENST00000233084 C19orf44Q9H6X5 657 aa19.31■□□□□ 0.68
DDX1-201ENST00000233084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.68
DDX1-201ENST00000233084 GGNBP2Q9H3C7 697 aa19.31■□□□□ 0.68
DDX1-201ENST00000233084 C1orf115Q9H7X2 142 aa19.31■□□□□ 0.68
DDX1-201ENST00000233084 GTPBP4Q9BZE4 634 aaKnown RBP19.3■□□□□ 0.68
DDX1-201ENST00000233084 U2AF1L5P0DN76 240 aaPredicted RBP19.3■□□□□ 0.68
DDX1-201ENST00000233084 U2AF1Q01081 240 aaKnown RBP eCLIP19.3■□□□□ 0.68
DDX1-201ENST00000233084 DCCP43146 1447 aa19.3■□□□□ 0.68
DDX1-201ENST00000233084 SSH2Q76I76 1423 aa19.3■□□□□ 0.68
DDX1-201ENST00000233084 MTHFSP49914 203 aa19.29■□□□□ 0.68
DDX1-201ENST00000233084 KIF20AO95235 890 aa19.28■□□□□ 0.68
DDX1-201ENST00000233084 CYP2E1P05181 493 aaPredicted RBP19.27■□□□□ 0.68
DDX1-201ENST00000233084 IQSEC2Q5JU85 1478 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms