RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 POLKQ9UBT6 870 aa17.19■□□□□ 0.34
PCDHB3-201ENST00000231130 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
PCDHB3-201ENST00000231130 FANCAO15360 1455 aa17.18■□□□□ 0.34
PCDHB3-201ENST00000231130 LRSAM1Q6UWE0 723 aa17.18■□□□□ 0.34
PCDHB3-201ENST00000231130 MEIS3Q99687 375 aa17.18■□□□□ 0.34
PCDHB3-201ENST00000231130 MYOM2P54296 1465 aa17.18■□□□□ 0.34
PCDHB3-201ENST00000231130 ZFYVE16Q7Z3T8 1539 aa17.18■□□□□ 0.34
PCDHB3-201ENST00000231130 DCTPP1Q9H773 170 aa17.17■□□□□ 0.34
PCDHB3-201ENST00000231130 ANO2Q9NQ90 1003 aa17.17■□□□□ 0.34
PCDHB3-201ENST00000231130 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCDHB3-201ENST00000231130 EXOC6BQ9Y2D4 811 aa17.17■□□□□ 0.34
PCDHB3-201ENST00000231130 TAF7LQ5H9L4 462 aa17.17■□□□□ 0.34
PCDHB3-201ENST00000231130 WAPLQ7Z5K2 1190 aa17.17■□□□□ 0.34
PCDHB3-201ENST00000231130 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
PCDHB3-201ENST00000231130 TMX3Q96JJ7 454 aa17.17■□□□□ 0.34
PCDHB3-201ENST00000231130 F6X3S4 739 aa17.16■□□□□ 0.34
PCDHB3-201ENST00000231130 REC8O95072 547 aa17.16■□□□□ 0.34
PCDHB3-201ENST00000231130 HMGN5P82970 282 aaKnown RBP17.16■□□□□ 0.34
PCDHB3-201ENST00000231130 IDI1Q13907 227 aa17.16■□□□□ 0.34
PCDHB3-201ENST00000231130 TRERF1Q96PN7 1200 aa17.16■□□□□ 0.34
PCDHB3-201ENST00000231130 ADGRL1O94910 1474 aa17.16■□□□□ 0.34
PCDHB3-201ENST00000231130 ZNF710Q8N1W2 664 aa17.16■□□□□ 0.34
PCDHB3-201ENST00000231130 CWC22Q9HCG8 908 aaKnown RBP17.16■□□□□ 0.34
PCDHB3-201ENST00000231130 NSD2O96028 1365 aa17.16■□□□□ 0.34
PCDHB3-201ENST00000231130 MCM5P33992 734 aa17.15■□□□□ 0.34
PCDHB3-201ENST00000231130 TTC12Q9H892 705 aaPredicted RBP17.15■□□□□ 0.34
PCDHB3-201ENST00000231130 TET3O43151 1660 aa17.15■□□□□ 0.34
PCDHB3-201ENST00000231130 CHAF1AQ13111 956 aaPredicted RBP17.15■□□□□ 0.34
PCDHB3-201ENST00000231130 ATP7AQ04656 1500 aa17.15■□□□□ 0.34
PCDHB3-201ENST00000231130 GADD45BO75293 160 aaPredicted RBP17.15■□□□□ 0.34
PCDHB3-201ENST00000231130 MCM10Q7L590 875 aa17.15■□□□□ 0.34
PCDHB3-201ENST00000231130 USP25Q9UHP3 1055 aa17.15■□□□□ 0.34
PCDHB3-201ENST00000231130 KIF1BO60333 1816 aa17.14■□□□□ 0.34
PCDHB3-201ENST00000231130 ERC2O15083 957 aa17.14■□□□□ 0.33
PCDHB3-201ENST00000231130 NME9Q86XW9 330 aa17.14■□□□□ 0.33
PCDHB3-201ENST00000231130 QRICH2Q9H0J4 1663 aa17.14■□□□□ 0.33
PCDHB3-201ENST00000231130 CYP2E1P05181 493 aaPredicted RBP17.14■□□□□ 0.33
PCDHB3-201ENST00000231130 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.14■□□□□ 0.33
PCDHB3-201ENST00000231130 NUTM2FA1L443 756 aa17.14■□□□□ 0.33
PCDHB3-201ENST00000231130 ARHGAP45Q92619 1136 aa17.14■□□□□ 0.33
PCDHB3-201ENST00000231130 PDLIM2Q96JY6 352 aa17.14■□□□□ 0.33
PCDHB3-201ENST00000231130 TSPY26PQ9H489 355 aa17.14■□□□□ 0.33
PCDHB3-201ENST00000231130 CLEC17AQ6ZS10 378 aa17.13■□□□□ 0.33
PCDHB3-201ENST00000231130 AEBP1Q8IUX7 1158 aa17.13■□□□□ 0.33
PCDHB3-201ENST00000231130 ABCC4O15439 1325 aa17.13■□□□□ 0.33
PCDHB3-201ENST00000231130 NOLC1Q14978 699 aaKnown RBP eCLIP17.13■□□□□ 0.33
PCDHB3-201ENST00000231130 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
PCDHB3-201ENST00000231130 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
PCDHB3-201ENST00000231130 NCKAP5LQ9HCH0 1330 aa17.12■□□□□ 0.33
PCDHB3-201ENST00000231130 MROH2AA6NES4 1674 aa17.12■□□□□ 0.33
PCDHB3-201ENST00000231130 MAP4K4O95819 1239 aaPredicted RBP17.12■□□□□ 0.33
PCDHB3-201ENST00000231130 CEP85Q6P2H3 762 aa17.12■□□□□ 0.33
PCDHB3-201ENST00000231130 PALD1Q9ULE6 856 aa17.12■□□□□ 0.33
PCDHB3-201ENST00000231130 CERS3Q8IU89 383 aa17.12■□□□□ 0.33
PCDHB3-201ENST00000231130 NPATQ14207 1427 aa17.12■□□□□ 0.33
PCDHB3-201ENST00000231130 ERICH4A6NGS2 130 aa17.11■□□□□ 0.33
PCDHB3-201ENST00000231130 RAPGEF3O95398 923 aa17.11■□□□□ 0.33
PCDHB3-201ENST00000231130 SLC4A2P04920 1241 aa17.11■□□□□ 0.33
PCDHB3-201ENST00000231130 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
PCDHB3-201ENST00000231130 IBTKQ9P2D0 1353 aaPredicted RBP17.11■□□□□ 0.33
PCDHB3-201ENST00000231130 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
PCDHB3-201ENST00000231130 ZNF428Q96B54 188 aa17.11■□□□□ 0.33
PCDHB3-201ENST00000231130 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
PCDHB3-201ENST00000231130 CHMP3Q9Y3E7 222 aa17.11■□□□□ 0.33
PCDHB3-201ENST00000231130 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
PCDHB3-201ENST00000231130 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
PCDHB3-201ENST00000231130 CFAP74Q9C0B2 1584 aa17.1■□□□□ 0.33
PCDHB3-201ENST00000231130 PRIMPOLQ96LW4 560 aa17.1■□□□□ 0.33
PCDHB3-201ENST00000231130 KIAA1210Q9ULL0 1709 aa17.09■□□□□ 0.33
PCDHB3-201ENST00000231130 MBD3O95983 291 aa17.08■□□□□ 0.33
PCDHB3-201ENST00000231130 HCLS1P14317 486 aaPredicted RBP17.08■□□□□ 0.33
PCDHB3-201ENST00000231130 TAF3Q5VWG9 929 aa17.08■□□□□ 0.32
PCDHB3-201ENST00000231130 SULT6B1Q6IMI4 303 aa17.08■□□□□ 0.32
PCDHB3-201ENST00000231130 ADGRB2O60241 1585 aa17.08■□□□□ 0.32
PCDHB3-201ENST00000231130 USP48Q86UV5 1035 aa17.08■□□□□ 0.32
PCDHB3-201ENST00000231130 SPC24Q8NBT2 197 aa17.08■□□□□ 0.32
PCDHB3-201ENST00000231130 PDE1AP54750 535 aa17.07■□□□□ 0.32
PCDHB3-201ENST00000231130 RPAP2Q8IXW5 612 aaPredicted RBP17.07■□□□□ 0.32
PCDHB3-201ENST00000231130 MSH6P52701 1360 aa17.07■□□□□ 0.32
PCDHB3-201ENST00000231130 FIBPO43427 364 aa17.06■□□□□ 0.32
PCDHB3-201ENST00000231130 IL1RAPL2Q9NP60 686 aa17.06■□□□□ 0.32
PCDHB3-201ENST00000231130 RPGRIP1LQ68CZ1 1315 aa17.06■□□□□ 0.32
PCDHB3-201ENST00000231130 ZCCHC11Q5TAX3 1644 aaKnown RBP17.06■□□□□ 0.32
PCDHB3-201ENST00000231130 SYAP1Q96A49 352 aaPredicted RBP17.06■□□□□ 0.32
PCDHB3-201ENST00000231130 MCCP23508 829 aa17.06■□□□□ 0.32
PCDHB3-201ENST00000231130 G2E3Q7L622 706 aa17.06■□□□□ 0.32
PCDHB3-201ENST00000231130 ADGRB1O14514 1584 aa17.05■□□□□ 0.32
PCDHB3-201ENST00000231130 ADCY5O95622 1261 aa17.05■□□□□ 0.32
PCDHB3-201ENST00000231130 DDX54Q8TDD1 881 aaKnown RBP17.05■□□□□ 0.32
PCDHB3-201ENST00000231130 BRPF1P55201 1214 aaPredicted RBP17.05■□□□□ 0.32
PCDHB3-201ENST00000231130 CNPY2Q9Y2B0 182 aa17.05■□□□□ 0.32
PCDHB3-201ENST00000231130 HMMRO75330 724 aa17.04■□□□□ 0.32
PCDHB3-201ENST00000231130 FBXO31Q5XUX0 539 aaPredicted RBP17.04■□□□□ 0.32
PCDHB3-201ENST00000231130 LRRC7Q96NW7 1537 aa17.04■□□□□ 0.32
PCDHB3-201ENST00000231130 IL13P35225 146 aa17.04■□□□□ 0.32
PCDHB3-201ENST00000231130 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
PCDHB3-201ENST00000231130 EFCAB6Q5THR3 1501 aa17.04■□□□□ 0.32
PCDHB3-201ENST00000231130 MED14O60244 1454 aa17.04■□□□□ 0.32
PCDHB3-201ENST00000231130 PTCH1Q13635 1447 aa17.03■□□□□ 0.32
PCDHB3-201ENST00000231130 RIOK3O14730 519 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms