RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
SCNN1A-201ENST00000228916 C8orf58Q8NAV2 365 aa17.18■□□□□ 0.34
SCNN1A-201ENST00000228916 LRSAM1Q6UWE0 723 aa17.17■□□□□ 0.34
SCNN1A-201ENST00000228916 RBM27Q9P2N5 1060 aaKnown RBP17.17■□□□□ 0.34
SCNN1A-201ENST00000228916 NEO1Q92859 1461 aa17.17■□□□□ 0.34
SCNN1A-201ENST00000228916 ANKRD44Q8N8A2 993 aa17.17■□□□□ 0.34
SCNN1A-201ENST00000228916 SDSP20132 328 aa17.16■□□□□ 0.34
SCNN1A-201ENST00000228916 FBXO31Q5XUX0 539 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-201ENST00000228916 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-201ENST00000228916 TMEM63CQ9P1W3 806 aa17.16■□□□□ 0.34
SCNN1A-201ENST00000228916 EMILIN1Q9Y6C2 1016 aa17.16■□□□□ 0.34
SCNN1A-201ENST00000228916 RICTORQ6R327 1708 aa17.16■□□□□ 0.34
SCNN1A-201ENST00000228916 RBM10P98175 930 aaKnown RBP17.15■□□□□ 0.34
SCNN1A-201ENST00000228916 OTUD7AQ8TE49 926 aaPredicted RBP17.15■□□□□ 0.34
SCNN1A-201ENST00000228916 CSPP1Q1MSJ5 1256 aa17.15■□□□□ 0.34
SCNN1A-201ENST00000228916 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
SCNN1A-201ENST00000228916 WAPLQ7Z5K2 1190 aa17.15■□□□□ 0.34
SCNN1A-201ENST00000228916 DLG5Q8TDM6 1919 aa17.14■□□□□ 0.33
SCNN1A-201ENST00000228916 IL13P35225 146 aa17.14■□□□□ 0.33
SCNN1A-201ENST00000228916 RPAP2Q8IXW5 612 aaPredicted RBP17.14■□□□□ 0.33
SCNN1A-201ENST00000228916 REC8O95072 547 aa17.14■□□□□ 0.33
SCNN1A-201ENST00000228916 LMOD3Q0VAK6 560 aa17.14■□□□□ 0.33
SCNN1A-201ENST00000228916 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
SCNN1A-201ENST00000228916 RGS12O14924 1447 aa17.13■□□□□ 0.33
SCNN1A-201ENST00000228916 UQCRHLA0A096LP55 91 aa17.13■□□□□ 0.33
SCNN1A-201ENST00000228916 UQCRHP07919 91 aa17.13■□□□□ 0.33
SCNN1A-201ENST00000228916 CCDC39Q9UFE4 941 aa17.13■□□□□ 0.33
SCNN1A-201ENST00000228916 CPSF1Q10570 1443 aaKnown RBP17.12■□□□□ 0.33
SCNN1A-201ENST00000228916 CEP85Q6P2H3 762 aa17.12■□□□□ 0.33
SCNN1A-201ENST00000228916 ATP7BP35670 1465 aa17.12■□□□□ 0.33
SCNN1A-201ENST00000228916 SYCE3A1L190 88 aa17.12■□□□□ 0.33
SCNN1A-201ENST00000228916 FAM13BQ9NYF5 915 aa17.12■□□□□ 0.33
SCNN1A-201ENST00000228916 NSFL1CQ9UNZ2 370 aaKnown RBP17.12■□□□□ 0.33
SCNN1A-201ENST00000228916 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
SCNN1A-201ENST00000228916 MBD3O95983 291 aa17.12■□□□□ 0.33
SCNN1A-201ENST00000228916 FAM83GA6ND36 823 aa17.11■□□□□ 0.33
SCNN1A-201ENST00000228916 DYNC1I1O14576 645 aa17.11■□□□□ 0.33
SCNN1A-201ENST00000228916 ZRANB1Q9UGI0 708 aa17.11■□□□□ 0.33
SCNN1A-201ENST00000228916 ERC2O15083 957 aa17.1■□□□□ 0.33
SCNN1A-201ENST00000228916 NME9Q86XW9 330 aa17.1■□□□□ 0.33
SCNN1A-201ENST00000228916 CHAMP1Q96JM3 812 aa17.1■□□□□ 0.33
SCNN1A-201ENST00000228916 RTL1A6NKG5 1358 aa17.1■□□□□ 0.33
SCNN1A-201ENST00000228916 MTERF4Q7Z6M4 381 aaKnown RBP17.1■□□□□ 0.33
SCNN1A-201ENST00000228916 DCTN1Q14203 1278 aa17.09■□□□□ 0.33
SCNN1A-201ENST00000228916 SMARCA5O60264 1052 aaPredicted RBP17.08■□□□□ 0.33
SCNN1A-201ENST00000228916 SASS6Q6UVJ0 657 aa17.08■□□□□ 0.33
SCNN1A-201ENST00000228916 BRD1O95696 1058 aa17.08■□□□□ 0.32
SCNN1A-201ENST00000228916 TMX3Q96JJ7 454 aa17.07■□□□□ 0.32
SCNN1A-201ENST00000228916 OSBPL3Q9H4L5 887 aa17.07■□□□□ 0.32
SCNN1A-201ENST00000228916 STAG3Q9UJ98 1225 aa17.07■□□□□ 0.32
SCNN1A-201ENST00000228916 AATKQ6ZMQ8 1374 aa17.07■□□□□ 0.32
SCNN1A-201ENST00000228916 CUL4AQ13619 759 aa17.07■□□□□ 0.32
SCNN1A-201ENST00000228916 RRS1Q15050 365 aaKnown RBP17.07■□□□□ 0.32
SCNN1A-201ENST00000228916 MSH6P52701 1360 aa17.07■□□□□ 0.32
SCNN1A-201ENST00000228916 RIMBP3CA6NJZ7 1639 aa17.06■□□□□ 0.32
SCNN1A-201ENST00000228916 RIMBP3BA6NNM3 1639 aa17.06■□□□□ 0.32
SCNN1A-201ENST00000228916 MCM2P49736 904 aa17.06■□□□□ 0.32
SCNN1A-201ENST00000228916 RIMBP3Q9UFD9 1639 aa17.06■□□□□ 0.32
SCNN1A-201ENST00000228916 DLC1Q96QB1 1528 aa17.06■□□□□ 0.32
SCNN1A-201ENST00000228916 SETD1AO15047 1707 aaKnown RBP17.06■□□□□ 0.32
SCNN1A-201ENST00000228916 EDC4Q6P2E9 1401 aaKnown RBP17.06■□□□□ 0.32
SCNN1A-201ENST00000228916 PRDM4Q9UKN5 801 aa17.05■□□□□ 0.32
SCNN1A-201ENST00000228916 HAP1P54257 671 aaPredicted RBP17.05■□□□□ 0.32
SCNN1A-201ENST00000228916 NCKAP5LQ9HCH0 1330 aa17.05■□□□□ 0.32
SCNN1A-201ENST00000228916 NEK4P51957 841 aa17.05■□□□□ 0.32
SCNN1A-201ENST00000228916 RNF214Q8ND24 703 aa17.04■□□□□ 0.32
SCNN1A-201ENST00000228916 MEIS3Q99687 375 aa17.04■□□□□ 0.32
SCNN1A-201ENST00000228916 TSPY26PQ9H489 355 aa17.04■□□□□ 0.32
SCNN1A-201ENST00000228916 PTPRCP08575 1304 aa17.04■□□□□ 0.32
SCNN1A-201ENST00000228916 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
SCNN1A-201ENST00000228916 INTS4Q96HW7 963 aaKnown RBP17.03■□□□□ 0.32
SCNN1A-201ENST00000228916 APBB1O00213 710 aa17.03■□□□□ 0.32
SCNN1A-201ENST00000228916 PDE1AP54750 535 aa17.03■□□□□ 0.32
SCNN1A-201ENST00000228916 CPS1P31327 1500 aa17.03■□□□□ 0.32
SCNN1A-201ENST00000228916 FOXD4L5Q5VV16 416 aaPredicted RBP17.03■□□□□ 0.32
SCNN1A-201ENST00000228916 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
SCNN1A-201ENST00000228916 FOXD4L4Q8WXT5 416 aaPredicted RBP17.03■□□□□ 0.32
SCNN1A-201ENST00000228916 KIAA0232Q92628 1395 aa17.02■□□□□ 0.32
SCNN1A-201ENST00000228916 WASLO00401 505 aaPredicted RBP17.02■□□□□ 0.31
SCNN1A-201ENST00000228916 SYAP1Q96A49 352 aaPredicted RBP17.02■□□□□ 0.31
SCNN1A-201ENST00000228916 TUBGCP6Q96RT7 1819 aa17.01■□□□□ 0.31
SCNN1A-201ENST00000228916 KIAA2012Q0VF49 1180 aa17.01■□□□□ 0.31
SCNN1A-201ENST00000228916 A2ML1A8K2U0 1454 aa17.01■□□□□ 0.31
SCNN1A-201ENST00000228916 CHL1O00533 1208 aa17.01■□□□□ 0.31
SCNN1A-201ENST00000228916 HMMRO75330 724 aa17.01■□□□□ 0.31
SCNN1A-201ENST00000228916 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCNN1A-201ENST00000228916 IL17RAQ96F46 866 aa17.01■□□□□ 0.31
SCNN1A-201ENST00000228916 ANAPC15P60006 121 aa17■□□□□ 0.31
SCNN1A-201ENST00000228916 SMAP1Q8IYB5 467 aaPredicted RBP17■□□□□ 0.31
SCNN1A-201ENST00000228916 COG3Q96JB2 828 aa17■□□□□ 0.31
SCNN1A-201ENST00000228916 ESYT1Q9BSJ8 1104 aa17■□□□□ 0.31
SCNN1A-201ENST00000228916 SALL3Q9BXA9 1300 aa17■□□□□ 0.31
SCNN1A-201ENST00000228916 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
SCNN1A-201ENST00000228916 PHF14O94880 888 aa16.99■□□□□ 0.31
SCNN1A-201ENST00000228916 PTMAP06454 111 aaKnown RBP16.99■□□□□ 0.31
SCNN1A-201ENST00000228916 MYRIPQ8NFW9 859 aa16.99■□□□□ 0.31
SCNN1A-201ENST00000228916 MON2Q7Z3U7 1717 aa16.98■□□□□ 0.31
SCNN1A-201ENST00000228916 UVSSAQ2YD98 709 aa16.98■□□□□ 0.31
SCNN1A-201ENST00000228916 FAM184AQ8NB25 1140 aa16.98■□□□□ 0.31
SCNN1A-201ENST00000228916 NUDT16Q96DE0 195 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms