RNA–Protein interactions for RNA: ENST00000228140.6

RPS13-201, Transcript of ribosomal protein S13, humanhuman

TSL 2 BASIC

Gene RPS13, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-201ENST00000228140 RAPGEF4Q8WZA2 1011 aa14.46□□□□□ -0.09
RPS13-201ENST00000228140 POLR3GLQ9BT43 218 aa14.46□□□□□ -0.09
RPS13-201ENST00000228140 CARD14Q9BXL6 1004 aa14.46□□□□□ -0.09
RPS13-201ENST00000228140 ZCRB1Q8TBF4 217 aaKnown RBP14.45□□□□□ -0.1
RPS13-201ENST00000228140 TATP17735 454 aaPredicted RBP14.44□□□□□ -0.1
RPS13-201ENST00000228140 PROM2Q8N271 834 aa14.44□□□□□ -0.1
RPS13-201ENST00000228140 ANO8Q9HCE9 1232 aaPredicted RBP14.44□□□□□ -0.1
RPS13-201ENST00000228140 PPP1R1BQ9UD71 204 aaPredicted RBP14.44□□□□□ -0.1
RPS13-201ENST00000228140 HSPA5P11021 654 aaKnown RBP14.43□□□□□ -0.1
RPS13-201ENST00000228140 SLC15A2Q16348 729 aa14.43□□□□□ -0.1
RPS13-201ENST00000228140 HSP90AB2PQ58FF8 381 aa14.43□□□□□ -0.1
RPS13-201ENST00000228140 NBPF6Q5VWK0 638 aa14.43□□□□□ -0.1
RPS13-201ENST00000228140 NBPF4Q96M43 638 aa14.43□□□□□ -0.1
RPS13-201ENST00000228140 NSD2O96028 1365 aa14.43□□□□□ -0.1
RPS13-201ENST00000228140 PCDH11XQ9BZA7 1347 aa14.42□□□□□ -0.1
RPS13-201ENST00000228140 PCDH11YQ9BZA8 1340 aa14.42□□□□□ -0.1
RPS13-201ENST00000228140 ITGB4P16144 1822 aa14.41□□□□□ -0.1
RPS13-201ENST00000228140 SLC27A3Q5K4L6 730 aa14.41□□□□□ -0.1
RPS13-201ENST00000228140 USHBP1Q8N6Y0 703 aa14.41□□□□□ -0.1
RPS13-201ENST00000228140 SYTL4Q96C24 671 aaPredicted RBP14.41□□□□□ -0.1
RPS13-201ENST00000228140 EMILIN1Q9Y6C2 1016 aa14.41□□□□□ -0.1
RPS13-201ENST00000228140 NCAPD2Q15021 1401 aa14.41□□□□□ -0.1
RPS13-201ENST00000228140 PPM1GO15355 546 aaPredicted RBP14.4□□□□□ -0.1
RPS13-201ENST00000228140 TUBGCP6Q96RT7 1819 aa14.4□□□□□ -0.1
RPS13-201ENST00000228140 WASHC2AQ641Q2 1341 aa14.4□□□□□ -0.1
RPS13-201ENST00000228140 C5P01031 1676 aa14.39□□□□□ -0.11
RPS13-201ENST00000228140 HMGB2P26583 209 aaKnown RBP14.39□□□□□ -0.11
RPS13-201ENST00000228140 TOGARAM1Q9Y4F4 1720 aa14.38□□□□□ -0.11
RPS13-201ENST00000228140 PLEKHG2Q9H7P9 1386 aa14.38□□□□□ -0.11
RPS13-201ENST00000228140 PRIM1P49642 420 aaKnown RBP14.38□□□□□ -0.11
RPS13-201ENST00000228140 TAF1LQ8IZX4 1826 aa14.37□□□□□ -0.11
RPS13-201ENST00000228140 DCAF8L1A6NGE4 600 aa14.37□□□□□ -0.11
RPS13-201ENST00000228140 MTFR1LQ9H019 292 aa14.37□□□□□ -0.11
RPS13-201ENST00000228140 COL24A1Q17RW2 1714 aa14.36□□□□□ -0.11
RPS13-201ENST00000228140 ZBTB7AO95365 584 aa14.36□□□□□ -0.11
RPS13-201ENST00000228140 PANK3Q9H999 370 aa14.36□□□□□ -0.11
RPS13-201ENST00000228140 POLKQ9UBT6 870 aa14.36□□□□□ -0.11
RPS13-201ENST00000228140 SPG7Q9UQ90 795 aa14.36□□□□□ -0.11
RPS13-201ENST00000228140 TNNT2P45379 298 aaPredicted RBP14.34□□□□□ -0.11
RPS13-201ENST00000228140 LRRC4BQ9NT99 713 aa14.34□□□□□ -0.11
RPS13-201ENST00000228140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
RPS13-201ENST00000228140 CCNL1Q9UK58 526 aaPredicted RBP14.34□□□□□ -0.11
RPS13-201ENST00000228140 KNSTRNQ9Y448 316 aa14.34□□□□□ -0.11
RPS13-201ENST00000228140 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
RPS13-201ENST00000228140 PDGFDQ9GZP0 370 aaPredicted RBP14.33□□□□□ -0.12
RPS13-201ENST00000228140 ZNF827Q17R98 1081 aa14.32□□□□□ -0.12
RPS13-201ENST00000228140 MORC1Q86VD1 984 aa14.32□□□□□ -0.12
RPS13-201ENST00000228140 SLC16A10Q8TF71 515 aa14.32□□□□□ -0.12
RPS13-201ENST00000228140 EYA1Q99502 592 aa14.32□□□□□ -0.12
RPS13-201ENST00000228140 ATF5Q9Y2D1 282 aaPredicted RBP14.32□□□□□ -0.12
RPS13-201ENST00000228140 CYP27B1O15528 508 aa14.31□□□□□ -0.12
RPS13-201ENST00000228140 PTGER2P43116 358 aa14.31□□□□□ -0.12
RPS13-201ENST00000228140 EIF4A2Q14240 407 aaKnown RBP14.31□□□□□ -0.12
RPS13-201ENST00000228140 SMARCC1Q92922 1105 aaPredicted RBP14.31□□□□□ -0.12
RPS13-201ENST00000228140 TFCP2L1Q9NZI6 479 aa14.31□□□□□ -0.12
RPS13-201ENST00000228140 PALLDQ8WX93 1383 aa14.31□□□□□ -0.12
RPS13-201ENST00000228140 NKX1-1Q15270 411 aaPredicted RBP14.3□□□□□ -0.12
RPS13-201ENST00000228140 MPRIPQ6WCQ1 1025 aa14.3□□□□□ -0.12
RPS13-201ENST00000228140 IGSF1Q8N6C5 1336 aa14.3□□□□□ -0.12
RPS13-201ENST00000228140 C4BP0C0L5 1744 aa14.29□□□□□ -0.12
RPS13-201ENST00000228140 IFNL2Q8IZJ0 200 aa14.29□□□□□ -0.12
RPS13-201ENST00000228140 KIF7Q2M1P5 1343 aa14.29□□□□□ -0.12
RPS13-201ENST00000228140 PNPLA7Q6ZV29 1317 aa14.29□□□□□ -0.12
RPS13-201ENST00000228140 POLD1P28340 1107 aa14.28□□□□□ -0.12
RPS13-201ENST00000228140 ARXQ96QS3 562 aa14.28□□□□□ -0.12
RPS13-201ENST00000228140 MAP3K5Q99683 1374 aa14.28□□□□□ -0.12
RPS13-201ENST00000228140 SGIP1Q9BQI5 828 aa14.28□□□□□ -0.12
RPS13-201ENST00000228140 UBR3Q6ZT12 1888 aa14.27□□□□□ -0.12
RPS13-201ENST00000228140 ZNF831Q5JPB2 1677 aa14.27□□□□□ -0.12
RPS13-201ENST00000228140 PHKG2P15735 406 aa14.27□□□□□ -0.13
RPS13-201ENST00000228140 CHD4Q14839 1912 aa14.27□□□□□ -0.13
RPS13-201ENST00000228140 HSP90AB1P08238 724 aaKnown RBP14.26□□□□□ -0.13
RPS13-201ENST00000228140 FLAD1Q8NFF5 587 aa14.26□□□□□ -0.13
RPS13-201ENST00000228140 FHDC1Q9C0D6 1143 aaPredicted RBP14.26□□□□□ -0.13
RPS13-201ENST00000228140 TMOD3Q9NYL9 352 aa14.26□□□□□ -0.13
RPS13-201ENST00000228140 VIRMAQ69YN4 1812 aaKnown RBP14.26□□□□□ -0.13
RPS13-201ENST00000228140 KCNQ4P56696 695 aa14.25□□□□□ -0.13
RPS13-201ENST00000228140 AMOTQ4VCS5 1084 aa14.25□□□□□ -0.13
RPS13-201ENST00000228140 PLEKHO1Q53GL0 409 aaPredicted RBP14.25□□□□□ -0.13
RPS13-201ENST00000228140 SCN11AQ9UI33 1791 aa14.24□□□□□ -0.13
RPS13-201ENST00000228140 MSH5O43196 834 aa14.24□□□□□ -0.13
RPS13-201ENST00000228140 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
RPS13-201ENST00000228140 PIGBQ92521 554 aa14.24□□□□□ -0.13
RPS13-201ENST00000228140 SYT17Q9BSW7 474 aa14.24□□□□□ -0.13
RPS13-201ENST00000228140 COL5A3P25940 1745 aaPredicted RBP14.23□□□□□ -0.13
RPS13-201ENST00000228140 KDRP35968 1356 aa14.22□□□□□ -0.13
RPS13-201ENST00000228140 DCAF5Q96JK2 942 aa14.22□□□□□ -0.13
RPS13-201ENST00000228140 AK7Q96M32 723 aa14.22□□□□□ -0.13
RPS13-201ENST00000228140 ERVV-2B6SEH9 535 aa14.21□□□□□ -0.13
RPS13-201ENST00000228140 YY1P25490 414 aa14.21□□□□□ -0.13
RPS13-201ENST00000228140 C1orf141Q5JVX7 400 aa14.21□□□□□ -0.13
RPS13-201ENST00000228140 ZNF530Q6P9A1 599 aaPredicted RBP14.21□□□□□ -0.13
RPS13-201ENST00000228140 NPC1L1Q9UHC9 1359 aa14.21□□□□□ -0.14
RPS13-201ENST00000228140 LOC102724428A0A0B4J2F2 783 aa14.2□□□□□ -0.14
RPS13-201ENST00000228140 SIK1P57059 783 aa14.2□□□□□ -0.14
RPS13-201ENST00000228140 COL23A1Q86Y22 540 aaPredicted RBP14.2□□□□□ -0.14
RPS13-201ENST00000228140 CICQ96RK0 1608 aaPredicted RBP14.19□□□□□ -0.14
RPS13-201ENST00000228140 IL13P35225 146 aa14.19□□□□□ -0.14
RPS13-201ENST00000228140 SULT6B1Q6IMI4 303 aa14.19□□□□□ -0.14
RPS13-201ENST00000228140 KLHL34Q8N239 644 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms