RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CWC15Q9P013 229 aaKnown RBP15.6■□□□□ 0.09
COL1A1-201ENST00000225964 ANKIB1Q9P2G1 1089 aa15.6■□□□□ 0.09
COL1A1-201ENST00000225964 POGZQ7Z3K3 1410 aa15.6■□□□□ 0.09
COL1A1-201ENST00000225964 SPDYE4A6NLX3 237 aa15.6■□□□□ 0.09
COL1A1-201ENST00000225964 TNIP1Q15025 636 aa15.6■□□□□ 0.09
COL1A1-201ENST00000225964 METTL24Q5JXM2 366 aa15.6■□□□□ 0.09
COL1A1-201ENST00000225964 AIDAQ96BJ3 306 aa15.6■□□□□ 0.09
COL1A1-201ENST00000225964 NFKBIBQ15653 356 aa15.6■□□□□ 0.09
COL1A1-201ENST00000225964 FAM177A1Q8N128 213 aaPredicted RBP15.6■□□□□ 0.09
COL1A1-201ENST00000225964 LRRC9Q6ZRR7 1453 aa15.59■□□□□ 0.09
COL1A1-201ENST00000225964 ERBINQ96RT1 1412 aa15.59■□□□□ 0.09
COL1A1-201ENST00000225964 MRE11P49959 708 aa15.59■□□□□ 0.09
COL1A1-201ENST00000225964 LARP1BQ659C4 914 aaKnown RBP15.59■□□□□ 0.09
COL1A1-201ENST00000225964 GBP2P32456 591 aaPredicted RBP15.59■□□□□ 0.09
COL1A1-201ENST00000225964 CENPHQ9H3R5 247 aa15.59■□□□□ 0.09
COL1A1-201ENST00000225964 SEC63Q9UGP8 760 aaKnown RBP15.59■□□□□ 0.09
COL1A1-201ENST00000225964 CTNNA3Q9UI47 895 aa15.59■□□□□ 0.09
COL1A1-201ENST00000225964 KIF21BO75037 1637 aa15.59■□□□□ 0.09
COL1A1-201ENST00000225964 TMOD3Q9NYL9 352 aa15.59■□□□□ 0.09
COL1A1-201ENST00000225964 TAX1BP1Q86VP1 789 aa15.58■□□□□ 0.09
COL1A1-201ENST00000225964 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.09
COL1A1-201ENST00000225964 JAKMIP1Q96N16 626 aaKnown RBP15.58■□□□□ 0.09
COL1A1-201ENST00000225964 BLOC1S2Q6QNY1 142 aa15.58■□□□□ 0.08
COL1A1-201ENST00000225964 IGF1RP08069 1367 aa15.58■□□□□ 0.08
COL1A1-201ENST00000225964 WDHD1O75717 1129 aaPredicted RBP15.58■□□□□ 0.08
COL1A1-201ENST00000225964 CCDC192P0DO97 292 aa15.58■□□□□ 0.08
COL1A1-201ENST00000225964 CBFA2T2O43439 604 aa15.57■□□□□ 0.08
COL1A1-201ENST00000225964 CAVIN4Q5BKX8 364 aa15.57■□□□□ 0.08
COL1A1-201ENST00000225964 PPP4R3AQ6IN85 833 aa15.57■□□□□ 0.08
COL1A1-201ENST00000225964 IMMTQ16891 758 aaKnown RBP15.57■□□□□ 0.08
COL1A1-201ENST00000225964 WDR78Q5VTH9 848 aa15.57■□□□□ 0.08
COL1A1-201ENST00000225964 GNAT3A8MTJ3 354 aa15.57■□□□□ 0.08
COL1A1-201ENST00000225964 ADAMTS2O95450 1211 aa15.57■□□□□ 0.08
COL1A1-201ENST00000225964 WASF1Q92558 559 aa15.57■□□□□ 0.08
COL1A1-201ENST00000225964 NBPF1Q3BBV0 1214 aa15.56■□□□□ 0.08
COL1A1-201ENST00000225964 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
COL1A1-201ENST00000225964 IL1RAPL2Q9NP60 686 aa15.56■□□□□ 0.08
COL1A1-201ENST00000225964 KRT85P78386 507 aa15.56■□□□□ 0.08
COL1A1-201ENST00000225964 DNAI2Q9GZS0 605 aa15.56■□□□□ 0.08
COL1A1-201ENST00000225964 FAM193AP78312 1265 aa15.56■□□□□ 0.08
COL1A1-201ENST00000225964 LEKR1Q6ZMV7 388 aa15.56■□□□□ 0.08
COL1A1-201ENST00000225964 FANCIQ9NVI1 1328 aa15.56■□□□□ 0.08
COL1A1-201ENST00000225964 MKNK2Q9HBH9 465 aa15.56■□□□□ 0.08
COL1A1-201ENST00000225964 MINDY4BA8MYZ0 360 aa15.55■□□□□ 0.08
COL1A1-201ENST00000225964 SPATA32Q96LK8 384 aa15.55■□□□□ 0.08
COL1A1-201ENST00000225964 PTCD1O75127 700 aaKnown RBP15.55■□□□□ 0.08
COL1A1-201ENST00000225964 WDR33Q9C0J8 1336 aaKnown RBP15.55■□□□□ 0.08
COL1A1-201ENST00000225964 POTEJP0CG39 1038 aa15.55■□□□□ 0.08
COL1A1-201ENST00000225964 DHX37Q8IY37 1157 aaKnown RBP15.55■□□□□ 0.08
COL1A1-201ENST00000225964 TMEM87AQ8NBN3 555 aa15.55■□□□□ 0.08
COL1A1-201ENST00000225964 C9orf84Q5VXU9 1444 aa15.55■□□□□ 0.08
COL1A1-201ENST00000225964 NUTM1Q86Y26 1132 aa15.55■□□□□ 0.08
COL1A1-201ENST00000225964 DZIP1Q86YF9 867 aaKnown RBP15.55■□□□□ 0.08
COL1A1-201ENST00000225964 ZNF287Q9HBT7 754 aa15.55■□□□□ 0.08
COL1A1-201ENST00000225964 RPGRQ92834 1020 aaKnown RBP15.54■□□□□ 0.08
COL1A1-201ENST00000225964 MIS18AQ9NYP9 233 aa15.54■□□□□ 0.08
COL1A1-201ENST00000225964 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
COL1A1-201ENST00000225964 HMGB2P26583 209 aaKnown RBP15.54■□□□□ 0.08
COL1A1-201ENST00000225964 CEP131Q9UPN4 1083 aa15.54■□□□□ 0.08
COL1A1-201ENST00000225964 KIAA1328Q86T90 577 aa15.54■□□□□ 0.08
COL1A1-201ENST00000225964 CCDC96Q2M329 555 aa15.54■□□□□ 0.08
COL1A1-201ENST00000225964 MYD88Q99836 296 aa15.54■□□□□ 0.08
COL1A1-201ENST00000225964 EIF5P55010 431 aaKnown RBP15.53■□□□□ 0.08
COL1A1-201ENST00000225964 CASKIN1Q8WXD9 1431 aa15.53■□□□□ 0.08
COL1A1-201ENST00000225964 CHD1LQ86WJ1 897 aa15.53■□□□□ 0.08
COL1A1-201ENST00000225964 EZRP15311 586 aaKnown RBP15.53■□□□□ 0.08
COL1A1-201ENST00000225964 K7ELQ4 463 aaPredicted RBP15.52■□□□□ 0.08
COL1A1-201ENST00000225964 RAPGEF3O95398 923 aa15.52■□□□□ 0.08
COL1A1-201ENST00000225964 AKAP2Q9Y2D5 859 aa15.52■□□□□ 0.08
COL1A1-201ENST00000225964 PLEKHH2Q8IVE3 1493 aa15.52■□□□□ 0.08
COL1A1-201ENST00000225964 DDX11Q96FC9 970 aa15.52■□□□□ 0.08
COL1A1-201ENST00000225964 DHX8Q14562 1220 aaKnown RBP15.52■□□□□ 0.07
COL1A1-201ENST00000225964 UBA5Q9GZZ9 404 aa15.52■□□□□ 0.07
COL1A1-201ENST00000225964 MPNDQ8N594 471 aa15.52■□□□□ 0.07
COL1A1-201ENST00000225964 LRRFIP2Q9Y608 721 aaKnown RBP15.51■□□□□ 0.07
COL1A1-201ENST00000225964 PPP1R12BO60237 982 aaPredicted RBP15.51■□□□□ 0.07
COL1A1-201ENST00000225964 CUL5Q93034 780 aa15.51■□□□□ 0.07
COL1A1-201ENST00000225964 CASTP20810 708 aaKnown RBP15.51■□□□□ 0.07
COL1A1-201ENST00000225964 MPRIPQ6WCQ1 1025 aa15.51■□□□□ 0.07
COL1A1-201ENST00000225964 KCNH5Q8NCM2 988 aa15.51■□□□□ 0.07
COL1A1-201ENST00000225964 CFAP45Q9UL16 551 aa15.51■□□□□ 0.07
COL1A1-201ENST00000225964 KRT32Q14532 448 aa15.51■□□□□ 0.07
COL1A1-201ENST00000225964 ATF7IPQ6VMQ6 1270 aa15.51■□□□□ 0.07
COL1A1-201ENST00000225964 USHBP1Q8N6Y0 703 aa15.51■□□□□ 0.07
COL1A1-201ENST00000225964 IFIT1P09914 478 aaKnown RBP15.51■□□□□ 0.07
COL1A1-201ENST00000225964 CCDC112Q8NEF3 446 aa15.51■□□□□ 0.07
COL1A1-201ENST00000225964 TAF4BQ92750 862 aa15.51■□□□□ 0.07
COL1A1-201ENST00000225964 WDR63Q8IWG1 891 aa15.5■□□□□ 0.07
COL1A1-201ENST00000225964 LIG1P18858 919 aa15.5■□□□□ 0.07
COL1A1-201ENST00000225964 PDE3AQ14432 1141 aa15.5■□□□□ 0.07
COL1A1-201ENST00000225964 MVPQ14764 893 aaKnown RBP15.5■□□□□ 0.07
COL1A1-201ENST00000225964 ZNF397Q8NF99 534 aaPredicted RBP15.5■□□□□ 0.07
COL1A1-201ENST00000225964 SLC52A1Q9NWF4 448 aa15.5■□□□□ 0.07
COL1A1-201ENST00000225964 ANAPC15P60006 121 aa15.5■□□□□ 0.07
COL1A1-201ENST00000225964 ZSCAN31Q96LW9 406 aaPredicted RBP15.5■□□□□ 0.07
COL1A1-201ENST00000225964 CFTRP13569 1480 aa15.5■□□□□ 0.07
COL1A1-201ENST00000225964 IQCEQ6IPM2 695 aa15.5■□□□□ 0.07
COL1A1-201ENST00000225964 NUDT16Q96DE0 195 aaKnown RBP15.5■□□□□ 0.07
COL1A1-201ENST00000225964 ZNF444Q8N0Y2 327 aaPredicted RBP15.49■□□□□ 0.07
COL1A1-201ENST00000225964 KIAA0754O94854 1291 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms