RNA–Protein interactions for RNA: ENST00000225719.8

CPD-201, Transcript of carboxypeptidase D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPD, Length 9,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-201ENST00000225719 SH3BGRP55822 239 aaPredicted RBP18.06■□□□□ 0.48
CPD-201ENST00000225719 TTC31Q49AM3 519 aaPredicted RBP18.06■□□□□ 0.48
CPD-201ENST00000225719 HS1BP3Q53T59 392 aa18.06■□□□□ 0.48
CPD-201ENST00000225719 CCDC94Q9BW85 323 aaPredicted RBP18.06■□□□□ 0.48
CPD-201ENST00000225719 GNAI2P04899 355 aa18.06■□□□□ 0.48
CPD-201ENST00000225719 CLCN1P35523 988 aa18.06■□□□□ 0.48
CPD-201ENST00000225719 BRPF1P55201 1214 aaPredicted RBP18.06■□□□□ 0.48
CPD-201ENST00000225719 IFFO1Q0D2I5 559 aa18.06■□□□□ 0.48
CPD-201ENST00000225719 RNF187Q5TA31 235 aaPredicted RBP18.06■□□□□ 0.48
CPD-201ENST00000225719 VPS36Q86VN1 386 aa18.06■□□□□ 0.48
CPD-201ENST00000225719 RSRC1Q96IZ7 334 aaKnown RBP18.06■□□□□ 0.48
CPD-201ENST00000225719 GTF2F1P35269 517 aaKnown RBP eCLIP18.06■□□□□ 0.48
CPD-201ENST00000225719 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
CPD-201ENST00000225719 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
CPD-201ENST00000225719 FOSBP53539 338 aa18.06■□□□□ 0.48
CPD-201ENST00000225719 SPA17Q15506 151 aa18.05■□□□□ 0.48
CPD-201ENST00000225719 A0A1B0GUA9 196 aa18.05■□□□□ 0.48
CPD-201ENST00000225719 SMAP1Q8IYB5 467 aaPredicted RBP18.04■□□□□ 0.48
CPD-201ENST00000225719 NEUROD6Q96NK8 337 aa18.04■□□□□ 0.48
CPD-201ENST00000225719 PANK1Q8TE04 598 aa18.04■□□□□ 0.48
CPD-201ENST00000225719 SRRTQ9BXP5 876 aaKnown RBP18.04■□□□□ 0.48
CPD-201ENST00000225719 KRT18P05783 430 aaKnown RBP18.04■□□□□ 0.48
CPD-201ENST00000225719 MSL1Q68DK7 614 aa18.04■□□□□ 0.48
CPD-201ENST00000225719 CEP112Q8N8E3 955 aa18.03■□□□□ 0.48
CPD-201ENST00000225719 KIF3CO14782 793 aa18.03■□□□□ 0.48
CPD-201ENST00000225719 CCT4P50991 539 aaKnown RBP18.03■□□□□ 0.48
CPD-201ENST00000225719 DNAJC21Q5F1R6 531 aaKnown RBP18.03■□□□□ 0.48
CPD-201ENST00000225719 LIG1P18858 919 aa18.03■□□□□ 0.48
CPD-201ENST00000225719 SARNPP82979 210 aaKnown RBP18.03■□□□□ 0.48
CPD-201ENST00000225719 KRT32Q14532 448 aa18.03■□□□□ 0.48
CPD-201ENST00000225719 TUBBP07437 444 aa18.03■□□□□ 0.48
CPD-201ENST00000225719 FAM177A1Q8N128 213 aaPredicted RBP18.03■□□□□ 0.48
CPD-201ENST00000225719 ALS2CR12Q96Q35 445 aa18.03■□□□□ 0.48
CPD-201ENST00000225719 CLGNO14967 610 aa18.02■□□□□ 0.48
CPD-201ENST00000225719 LMAN1P49257 510 aa18.02■□□□□ 0.48
CPD-201ENST00000225719 TRIM21P19474 475 aaKnown RBP18.02■□□□□ 0.48
CPD-201ENST00000225719 SCAND2PQ9GZW5 306 aaPredicted RBP18.02■□□□□ 0.48
CPD-201ENST00000225719 STMN4Q9H169 189 aaPredicted RBP18.02■□□□□ 0.48
CPD-201ENST00000225719 PSME1Q06323 249 aa18.02■□□□□ 0.48
CPD-201ENST00000225719 A6NNZ2 444 aa18.02■□□□□ 0.48
CPD-201ENST00000225719 TUBB8Q3ZCM7 444 aa18.02■□□□□ 0.48
CPD-201ENST00000225719 ARFGAP3Q9NP61 516 aa18.02■□□□□ 0.48
CPD-201ENST00000225719 DHX29Q7Z478 1369 aaKnown RBP18.02■□□□□ 0.48
CPD-201ENST00000225719 CEP131Q9UPN4 1083 aa18.02■□□□□ 0.48
CPD-201ENST00000225719 SYCE3A1L190 88 aa18.02■□□□□ 0.47
CPD-201ENST00000225719 ANO10Q9NW15 660 aa18.02■□□□□ 0.47
CPD-201ENST00000225719 NOL7Q9UMY1 257 aaKnown RBP18.02■□□□□ 0.47
CPD-201ENST00000225719 SEPT11Q9NVA2 429 aaKnown RBP18.01■□□□□ 0.47
CPD-201ENST00000225719 UVSSAQ2YD98 709 aa18.01■□□□□ 0.47
CPD-201ENST00000225719 GNL3LQ9NVN8 582 aaKnown RBP18.01■□□□□ 0.47
CPD-201ENST00000225719 ZSCAN25Q6NSZ9 544 aa18.01■□□□□ 0.47
CPD-201ENST00000225719 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
CPD-201ENST00000225719 CCDC50Q8IVM0 306 aa18.01■□□□□ 0.47
CPD-201ENST00000225719 TNNT1P13805 278 aa18■□□□□ 0.47
CPD-201ENST00000225719 POTEJP0CG39 1038 aa18■□□□□ 0.47
CPD-201ENST00000225719 RASSF4Q9H2L5 321 aa18■□□□□ 0.47
CPD-201ENST00000225719 PPP1R12BO60237 982 aaPredicted RBP18■□□□□ 0.47
CPD-201ENST00000225719 CFAP100Q494V2 611 aa18■□□□□ 0.47
CPD-201ENST00000225719 PAFAH1B1P43034 410 aa18■□□□□ 0.47
CPD-201ENST00000225719 CCDC150Q8NCX0 1101 aa18■□□□□ 0.47
CPD-201ENST00000225719 WASF1Q92558 559 aa18■□□□□ 0.47
CPD-201ENST00000225719 DNAI2Q9GZS0 605 aa18■□□□□ 0.47
CPD-201ENST00000225719 BMP2KQ9NSY1 1161 aaPredicted RBP18■□□□□ 0.47
CPD-201ENST00000225719 CEP83Q9Y592 693 aa18■□□□□ 0.47
CPD-201ENST00000225719 ZNF428Q96B54 188 aa18■□□□□ 0.47
CPD-201ENST00000225719 NACAP1Q9BZK3 213 aa18■□□□□ 0.47
CPD-201ENST00000225719 FGD6Q6ZV73 1430 aa18■□□□□ 0.47
CPD-201ENST00000225719 FGFR1OPO95684 399 aaKnown RBP17.99■□□□□ 0.47
CPD-201ENST00000225719 CLIP2Q9UDT6 1046 aa17.99■□□□□ 0.47
CPD-201ENST00000225719 GBP6Q6ZN66 633 aa17.99■□□□□ 0.47
CPD-201ENST00000225719 LARP1BQ659C4 914 aaKnown RBP17.99■□□□□ 0.47
CPD-201ENST00000225719 USO1O60763 962 aaKnown RBP17.99■□□□□ 0.47
CPD-201ENST00000225719 KIF6Q6ZMV9 814 aa17.98■□□□□ 0.47
CPD-201ENST00000225719 NECTIN2Q92692 538 aa17.98■□□□□ 0.47
CPD-201ENST00000225719 IKQ13123 557 aaPredicted RBP17.98■□□□□ 0.47
CPD-201ENST00000225719 TTC14Q96N46 770 aa17.98■□□□□ 0.47
CPD-201ENST00000225719 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
CPD-201ENST00000225719 ZFYP08048 801 aaPredicted RBP17.98■□□□□ 0.47
CPD-201ENST00000225719 RAPGEF4Q8WZA2 1011 aa17.98■□□□□ 0.47
CPD-201ENST00000225719 CCDC158Q5M9N0 1113 aa17.97■□□□□ 0.47
CPD-201ENST00000225719 SH2D4BQ5SQS7 431 aa17.97■□□□□ 0.47
CPD-201ENST00000225719 SURF6O75683 361 aaKnown RBP17.97■□□□□ 0.47
CPD-201ENST00000225719 CKAP4Q07065 602 aaKnown RBP17.97■□□□□ 0.47
CPD-201ENST00000225719 TMEM132AQ24JP5 1023 aa17.97■□□□□ 0.47
CPD-201ENST00000225719 HECW1Q76N89 1606 aa17.97■□□□□ 0.47
CPD-201ENST00000225719 CFAP65Q6ZU64 1925 aaKnown RBP17.97■□□□□ 0.47
CPD-201ENST00000225719 MINK1Q8N4C8 1332 aaPredicted RBP17.97■□□□□ 0.47
CPD-201ENST00000225719 MIPOL1Q8TD10 442 aa17.96■□□□□ 0.47
CPD-201ENST00000225719 SREK1Q8WXA9 508 aaKnown RBP17.96■□□□□ 0.47
CPD-201ENST00000225719 CCDC57Q2TAC2 916 aa17.96■□□□□ 0.47
CPD-201ENST00000225719 HMGB1P1B2RPK0 211 aaPredicted RBP17.96■□□□□ 0.47
CPD-201ENST00000225719 EIF5P55010 431 aaKnown RBP17.96■□□□□ 0.47
CPD-201ENST00000225719 LRRC9Q6ZRR7 1453 aa17.96■□□□□ 0.47
CPD-201ENST00000225719 CCDC69A6NI79 296 aa17.96■□□□□ 0.47
CPD-201ENST00000225719 CTNNA3Q9UI47 895 aa17.96■□□□□ 0.47
CPD-201ENST00000225719 A0A1B0GUL7 405 aa17.95■□□□□ 0.46
CPD-201ENST00000225719 HSF2BPO75031 334 aa17.95■□□□□ 0.46
CPD-201ENST00000225719 KIF5BP33176 963 aa17.95■□□□□ 0.46
CPD-201ENST00000225719 PAF1Q8N7H5 531 aa17.95■□□□□ 0.46
CPD-201ENST00000225719 TOP1P11387 765 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms