RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 PTCH1Q13635 1447 aa21.09■□□□□ 0.97
H2AFV-201ENST00000222690 TRIM6-TRIM34B2RNG4 842 aa21.09■□□□□ 0.97
H2AFV-201ENST00000222690 ZSCAN30Q86W11 494 aa21.09■□□□□ 0.97
H2AFV-201ENST00000222690 NUDT16Q96DE0 195 aaKnown RBP21.09■□□□□ 0.97
H2AFV-201ENST00000222690 MED14O60244 1454 aa21.09■□□□□ 0.97
H2AFV-201ENST00000222690 HECW2Q9P2P5 1572 aa21.08■□□□□ 0.97
H2AFV-201ENST00000222690 PRIM1P49642 420 aaKnown RBP21.08■□□□□ 0.97
H2AFV-201ENST00000222690 CFAP74Q9C0B2 1584 aa21.08■□□□□ 0.97
H2AFV-201ENST00000222690 RIMS2Q9UQ26 1411 aa21.07■□□□□ 0.96
H2AFV-201ENST00000222690 RPAP2Q8IXW5 612 aaPredicted RBP21.07■□□□□ 0.96
H2AFV-201ENST00000222690 YEATS2Q9ULM3 1422 aa21.07■□□□□ 0.96
H2AFV-201ENST00000222690 SYCE3A1L190 88 aa21.07■□□□□ 0.96
H2AFV-201ENST00000222690 WASLO00401 505 aaPredicted RBP21.07■□□□□ 0.96
H2AFV-201ENST00000222690 MSH6P52701 1360 aa21.06■□□□□ 0.96
H2AFV-201ENST00000222690 RBSNQ9H1K0 784 aa21.06■□□□□ 0.96
H2AFV-201ENST00000222690 LMBRD1Q9NUN5 540 aa21.06■□□□□ 0.96
H2AFV-201ENST00000222690 HMMRO75330 724 aa21.06■□□□□ 0.96
H2AFV-201ENST00000222690 RBM10P98175 930 aaKnown RBP21.06■□□□□ 0.96
H2AFV-201ENST00000222690 R3HCC1Q9Y3T6 440 aaKnown RBP21.06■□□□□ 0.96
H2AFV-201ENST00000222690 ERC2O15083 957 aa21.06■□□□□ 0.96
H2AFV-201ENST00000222690 ANO2Q9NQ90 1003 aa21.06■□□□□ 0.96
H2AFV-201ENST00000222690 SIGLEC1Q9BZZ2 1709 aa21.05■□□□□ 0.96
H2AFV-201ENST00000222690 RRP9O43818 475 aaKnown RBP21.05■□□□□ 0.96
H2AFV-201ENST00000222690 MPNDQ8N594 471 aa21.05■□□□□ 0.96
H2AFV-201ENST00000222690 PTMAP06454 111 aaKnown RBP21.04■□□□□ 0.96
H2AFV-201ENST00000222690 HAP1P54257 671 aaPredicted RBP21.04■□□□□ 0.96
H2AFV-201ENST00000222690 RTF1Q92541 710 aaKnown RBP21.04■□□□□ 0.96
H2AFV-201ENST00000222690 PIK3R4Q99570 1358 aa21.04■□□□□ 0.96
H2AFV-201ENST00000222690 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
H2AFV-201ENST00000222690 CCDC61Q9Y6R9 512 aa21.04■□□□□ 0.96
H2AFV-201ENST00000222690 XPCQ01831 940 aaPredicted RBP21.03■□□□□ 0.96
H2AFV-201ENST00000222690 TSPYL4Q9UJ04 414 aa21.03■□□□□ 0.96
H2AFV-201ENST00000222690 HSP90AB2PQ58FF8 381 aa21.03■□□□□ 0.96
H2AFV-201ENST00000222690 CWC22Q9HCG8 908 aaKnown RBP21.03■□□□□ 0.96
H2AFV-201ENST00000222690 EIF4A2Q14240 407 aaKnown RBP21.02■□□□□ 0.96
H2AFV-201ENST00000222690 PIK3C2BO00750 1634 aa21.02■□□□□ 0.96
H2AFV-201ENST00000222690 G2E3Q7L622 706 aa21.02■□□□□ 0.96
H2AFV-201ENST00000222690 FOXO3O43524 673 aa21.02■□□□□ 0.95
H2AFV-201ENST00000222690 UPF3BQ9BZI7 483 aaKnown RBP21.02■□□□□ 0.95
H2AFV-201ENST00000222690 PLPPR3Q6T4P5 718 aa21.01■□□□□ 0.95
H2AFV-201ENST00000222690 GPT2Q8TD30 523 aa21.01■□□□□ 0.95
H2AFV-201ENST00000222690 ESF1Q9H501 851 aaKnown RBP21.01■□□□□ 0.95
H2AFV-201ENST00000222690 GDPD2Q9HCC8 539 aa21.01■□□□□ 0.95
H2AFV-201ENST00000222690 FAM13BQ9NYF5 915 aa21.01■□□□□ 0.95
H2AFV-201ENST00000222690 PPP1R9BQ96SB3 815 aa21■□□□□ 0.95
H2AFV-201ENST00000222690 ARHGEF40Q8TER5 1519 aa21■□□□□ 0.95
H2AFV-201ENST00000222690 NSFL1CQ9UNZ2 370 aaKnown RBP21■□□□□ 0.95
H2AFV-201ENST00000222690 FKBP5Q13451 457 aaPredicted RBP20.99■□□□□ 0.95
H2AFV-201ENST00000222690 PDE1AP54750 535 aa20.99■□□□□ 0.95
H2AFV-201ENST00000222690 TMX3Q96JJ7 454 aa20.99■□□□□ 0.95
H2AFV-201ENST00000222690 RTL1A6NKG5 1358 aa20.99■□□□□ 0.95
H2AFV-201ENST00000222690 MCCP23508 829 aa20.98■□□□□ 0.95
H2AFV-201ENST00000222690 STK31Q9BXU1 1019 aa20.98■□□□□ 0.95
H2AFV-201ENST00000222690 TMEM63CQ9P1W3 806 aa20.98■□□□□ 0.95
H2AFV-201ENST00000222690 ZNF445P59923 1031 aa20.98■□□□□ 0.95
H2AFV-201ENST00000222690 TPM2P07951 284 aa20.98■□□□□ 0.95
H2AFV-201ENST00000222690 ZDHHC9Q9Y397 364 aa20.97■□□□□ 0.95
H2AFV-201ENST00000222690 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.97■□□□□ 0.95
H2AFV-201ENST00000222690 MAP4K4O95819 1239 aaPredicted RBP20.96■□□□□ 0.95
H2AFV-201ENST00000222690 CHL1O00533 1208 aa20.96■□□□□ 0.95
H2AFV-201ENST00000222690 PLCB2Q00722 1185 aa20.96■□□□□ 0.95
H2AFV-201ENST00000222690 IL1RAPL2Q9NP60 686 aa20.96■□□□□ 0.95
H2AFV-201ENST00000222690 MAP2P11137 1827 aaKnown RBP20.96■□□□□ 0.95
H2AFV-201ENST00000222690 EDC4Q6P2E9 1401 aaKnown RBP20.95■□□□□ 0.95
H2AFV-201ENST00000222690 CLEC17AQ6ZS10 378 aa20.95■□□□□ 0.94
H2AFV-201ENST00000222690 GNAI2P04899 355 aa20.95■□□□□ 0.94
H2AFV-201ENST00000222690 DNTTIP2Q5QJE6 756 aaKnown RBP20.95■□□□□ 0.94
H2AFV-201ENST00000222690 ALKQ9UM73 1620 aa20.95■□□□□ 0.94
H2AFV-201ENST00000222690 MYO5BQ9ULV0 1848 aa20.94■□□□□ 0.94
H2AFV-201ENST00000222690 LARP6Q9BRS8 491 aaKnown RBP20.94■□□□□ 0.94
H2AFV-201ENST00000222690 CYP2E1P05181 493 aaPredicted RBP20.94■□□□□ 0.94
H2AFV-201ENST00000222690 PALD1Q9ULE6 856 aa20.94■□□□□ 0.94
H2AFV-201ENST00000222690 ARHGAP31Q2M1Z3 1444 aa20.94■□□□□ 0.94
H2AFV-201ENST00000222690 LRRCC1Q9C099 1032 aa20.93■□□□□ 0.94
H2AFV-201ENST00000222690 PTPRCP08575 1304 aa20.93■□□□□ 0.94
H2AFV-201ENST00000222690 ATP10DQ9P241 1426 aa20.93■□□□□ 0.94
H2AFV-201ENST00000222690 DTNBO60941 627 aa20.92■□□□□ 0.94
H2AFV-201ENST00000222690 OFD1O75665 1012 aa20.92■□□□□ 0.94
H2AFV-201ENST00000222690 ZMYND15Q9H091 742 aa20.92■□□□□ 0.94
H2AFV-201ENST00000222690 MX1P20591 662 aa20.92■□□□□ 0.94
H2AFV-201ENST00000222690 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
H2AFV-201ENST00000222690 LTV1Q96GA3 475 aaPredicted RBP20.92■□□□□ 0.94
H2AFV-201ENST00000222690 LRSAM1Q6UWE0 723 aa20.91■□□□□ 0.94
H2AFV-201ENST00000222690 ATP7BP35670 1465 aa20.9■□□□□ 0.94
H2AFV-201ENST00000222690 PLEKHG5O94827 1062 aa20.9■□□□□ 0.94
H2AFV-201ENST00000222690 ESYT1Q9BSJ8 1104 aa20.9■□□□□ 0.94
H2AFV-201ENST00000222690 METP08581 1390 aa20.9■□□□□ 0.94
H2AFV-201ENST00000222690 AMPHP49418 695 aa20.9■□□□□ 0.94
H2AFV-201ENST00000222690 CCT4P50991 539 aaKnown RBP20.9■□□□□ 0.94
H2AFV-201ENST00000222690 PNMA6EA0A0J9YXQ4 647 aa20.9■□□□□ 0.94
H2AFV-201ENST00000222690 IBTKQ9P2D0 1353 aaPredicted RBP20.89■□□□□ 0.94
H2AFV-201ENST00000222690 NUTM1Q86Y26 1132 aa20.89■□□□□ 0.94
H2AFV-201ENST00000222690 DIP2CQ9Y2E4 1556 aa20.89■□□□□ 0.93
H2AFV-201ENST00000222690 MTHFSDQ2M296 383 aaKnown RBP20.89■□□□□ 0.93
H2AFV-201ENST00000222690 CDK12Q9NYV4 1490 aaPredicted RBP20.89■□□□□ 0.93
H2AFV-201ENST00000222690 NUTM2GQ5VZR2 741 aa20.89■□□□□ 0.93
H2AFV-201ENST00000222690 MBD3O95983 291 aa20.88■□□□□ 0.93
H2AFV-201ENST00000222690 FAM69CQ0P6D2 419 aa20.88■□□□□ 0.93
H2AFV-201ENST00000222690 LRRFIP2Q9Y608 721 aaKnown RBP20.88■□□□□ 0.93
H2AFV-201ENST00000222690 ACEP12821 1306 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms