RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 C8orf58Q8NAV2 365 aa27.93■■■□□ 2.06
CCDC9-201ENST00000221922 RTL1A6NKG5 1358 aa27.92■■■□□ 2.06
CCDC9-201ENST00000221922 ABCC4O15439 1325 aa27.92■■■□□ 2.06
CCDC9-201ENST00000221922 CHL1O00533 1208 aa27.91■■■□□ 2.06
CCDC9-201ENST00000221922 HOXC9P31274 260 aa27.91■■■□□ 2.06
CCDC9-201ENST00000221922 EYA1Q99502 592 aa27.91■■■□□ 2.06
CCDC9-201ENST00000221922 API5Q9BZZ5 524 aaKnown RBP27.91■■■□□ 2.06
CCDC9-201ENST00000221922 CRB1P82279 1406 aa27.9■■■□□ 2.06
CCDC9-201ENST00000221922 ELL2O00472 640 aaPredicted RBP27.9■■■□□ 2.06
CCDC9-201ENST00000221922 KIAA0232Q92628 1395 aa27.9■■■□□ 2.06
CCDC9-201ENST00000221922 LTN1O94822 1766 aa27.89■■■□□ 2.06
CCDC9-201ENST00000221922 ZBTB7BO15156 539 aaPredicted RBP27.89■■■□□ 2.06
CCDC9-201ENST00000221922 TBC1D2Q9BYX2 928 aa27.89■■■□□ 2.06
CCDC9-201ENST00000221922 NUTM2GQ5VZR2 741 aa27.88■■■□□ 2.05
CCDC9-201ENST00000221922 NFAT5O94916 1531 aa27.88■■■□□ 2.05
CCDC9-201ENST00000221922 MCM10Q7L590 875 aa27.88■■■□□ 2.05
CCDC9-201ENST00000221922 RBM33Q96EV2 1170 aaKnown RBP27.88■■■□□ 2.05
CCDC9-201ENST00000221922 MTHFSDQ2M296 383 aaKnown RBP27.87■■■□□ 2.05
CCDC9-201ENST00000221922 GAS2L2Q8NHY3 880 aa27.86■■■□□ 2.05
CCDC9-201ENST00000221922 NUCB1Q02818 461 aa27.85■■■□□ 2.05
CCDC9-201ENST00000221922 LRRC37A3O60309 1634 aa27.85■■■□□ 2.05
CCDC9-201ENST00000221922 PHRF1Q9P1Y6 1649 aaKnown RBP27.85■■■□□ 2.05
CCDC9-201ENST00000221922 ESCO1Q5FWF5 840 aa27.85■■■□□ 2.05
CCDC9-201ENST00000221922 SLKQ9H2G2 1235 aaPredicted RBP27.85■■■□□ 2.05
CCDC9-201ENST00000221922 GCC1Q96CN9 775 aa27.83■■■□□ 2.05
CCDC9-201ENST00000221922 HTATSF1O43719 755 aaKnown RBP27.82■■■□□ 2.04
CCDC9-201ENST00000221922 PSME1Q06323 249 aa27.82■■■□□ 2.04
CCDC9-201ENST00000221922 BRPF3Q9ULD4 1205 aa27.82■■■□□ 2.04
CCDC9-201ENST00000221922 C14orf37Q86TY3 774 aa27.82■■■□□ 2.04
CCDC9-201ENST00000221922 RTF1Q92541 710 aaKnown RBP27.82■■■□□ 2.04
CCDC9-201ENST00000221922 C22orf23Q9BZE7 217 aa27.82■■■□□ 2.04
CCDC9-201ENST00000221922 FOXO3O43524 673 aa27.8■■■□□ 2.04
CCDC9-201ENST00000221922 CHD1LQ86WJ1 897 aa27.8■■■□□ 2.04
CCDC9-201ENST00000221922 KIF1AQ12756 1690 aa27.79■■■□□ 2.04
CCDC9-201ENST00000221922 KCNH5Q8NCM2 988 aa27.78■■■□□ 2.04
CCDC9-201ENST00000221922 IP6K1Q92551 441 aa27.78■■■□□ 2.04
CCDC9-201ENST00000221922 SLIT3O75094 1523 aa27.76■■■□□ 2.03
CCDC9-201ENST00000221922 MFAP1P55081 439 aaKnown RBP27.76■■■□□ 2.03
CCDC9-201ENST00000221922 TRPM3Q9HCF6 1732 aaPredicted RBP27.75■■■□□ 2.03
CCDC9-201ENST00000221922 INTS3Q68E01 1043 aaKnown RBP27.75■■■□□ 2.03
CCDC9-201ENST00000221922 LNPKQ9C0E8 428 aa27.75■■■□□ 2.03
CCDC9-201ENST00000221922 KRT24Q2M2I5 525 aa27.74■■■□□ 2.03
CCDC9-201ENST00000221922 PTPRCP08575 1304 aa27.74■■■□□ 2.03
CCDC9-201ENST00000221922 PROSER2Q86WR7 435 aaPredicted RBP27.74■■■□□ 2.03
CCDC9-201ENST00000221922 ORAI2Q96SN7 254 aa27.73■■■□□ 2.03
CCDC9-201ENST00000221922 C1orf115Q9H7X2 142 aa27.73■■■□□ 2.03
CCDC9-201ENST00000221922 RGS12O14924 1447 aa27.73■■■□□ 2.03
CCDC9-201ENST00000221922 MAP3K5Q99683 1374 aa27.73■■■□□ 2.03
CCDC9-201ENST00000221922 GNAT3A8MTJ3 354 aa27.72■■■□□ 2.03
CCDC9-201ENST00000221922 TSPYL4Q9UJ04 414 aa27.72■■■□□ 2.03
CCDC9-201ENST00000221922 LTV1Q96GA3 475 aaPredicted RBP27.71■■■□□ 2.03
CCDC9-201ENST00000221922 ANKRD45Q5TZF3 282 aa27.71■■■□□ 2.03
CCDC9-201ENST00000221922 RTN4Q9NQC3 1192 aaKnown RBP27.71■■■□□ 2.03
CCDC9-201ENST00000221922 C1orf167Q5SNV9 1468 aa27.7■■■□□ 2.03
CCDC9-201ENST00000221922 MSH6P52701 1360 aa27.7■■■□□ 2.03
CCDC9-201ENST00000221922 SIRT2Q8IXJ6 389 aa27.69■■■□□ 2.02
CCDC9-201ENST00000221922 BMP2KLQ5H9B9 411 aa27.69■■■□□ 2.02
CCDC9-201ENST00000221922 C19orf44Q9H6X5 657 aa27.69■■■□□ 2.02
CCDC9-201ENST00000221922 MST1RQ04912 1400 aa27.69■■■□□ 2.02
CCDC9-201ENST00000221922 RBM25P49756 843 aaKnown RBP27.68■■■□□ 2.02
CCDC9-201ENST00000221922 BABAM1Q9NWV8 329 aa27.68■■■□□ 2.02
CCDC9-201ENST00000221922 MIS18AQ9NYP9 233 aa27.67■■■□□ 2.02
CCDC9-201ENST00000221922 CHMP5Q9NZZ3 219 aa27.65■■■□□ 2.02
CCDC9-201ENST00000221922 DCCP43146 1447 aa27.65■■■□□ 2.02
CCDC9-201ENST00000221922 NCOA3Q9Y6Q9 1424 aa27.64■■■□□ 2.02
CCDC9-201ENST00000221922 SOS1Q07889 1333 aaPredicted RBP27.64■■■□□ 2.02
CCDC9-201ENST00000221922 RGPD2P0DJD1 1756 aa27.64■■■□□ 2.02
CCDC9-201ENST00000221922 GCP02774 474 aa27.64■■■□□ 2.01
CCDC9-201ENST00000221922 NCAPD2Q15021 1401 aa27.64■■■□□ 2.01
CCDC9-201ENST00000221922 FAM208AQ9UK61 1670 aaKnown RBP27.63■■■□□ 2.01
CCDC9-201ENST00000221922 ARHGEF25Q86VW2 580 aa27.63■■■□□ 2.01
CCDC9-201ENST00000221922 STRCP1A6NGW2 1772 aa27.63■■■□□ 2.01
CCDC9-201ENST00000221922 NBPF6Q5VWK0 638 aa27.63■■■□□ 2.01
CCDC9-201ENST00000221922 USHBP1Q8N6Y0 703 aa27.63■■■□□ 2.01
CCDC9-201ENST00000221922 IL17REQ8NFR9 667 aa27.63■■■□□ 2.01
CCDC9-201ENST00000221922 NBPF4Q96M43 638 aa27.63■■■□□ 2.01
CCDC9-201ENST00000221922 ALS2Q96Q42 1657 aa27.62■■■□□ 2.01
CCDC9-201ENST00000221922 RPAP2Q8IXW5 612 aaPredicted RBP27.62■■■□□ 2.01
CCDC9-201ENST00000221922 CAMTA1Q9Y6Y1 1673 aa27.61■■■□□ 2.01
CCDC9-201ENST00000221922 SLC4A2P04920 1241 aa27.61■■■□□ 2.01
CCDC9-201ENST00000221922 MCM4P33991 863 aa27.61■■■□□ 2.01
CCDC9-201ENST00000221922 KRT28Q7Z3Y7 464 aa27.61■■■□□ 2.01
CCDC9-201ENST00000221922 SNX21Q969T3 373 aa27.61■■■□□ 2.01
CCDC9-201ENST00000221922 CACNA1FO60840 1977 aa27.61■■■□□ 2.01
CCDC9-201ENST00000221922 MED1Q15648 1581 aaPredicted RBP27.61■■■□□ 2.01
CCDC9-201ENST00000221922 XPCQ01831 940 aaPredicted RBP27.61■■■□□ 2.01
CCDC9-201ENST00000221922 HSCBQ8IWL3 235 aa27.61■■■□□ 2.01
CCDC9-201ENST00000221922 ANKRD44Q8N8A2 993 aa27.61■■■□□ 2.01
CCDC9-201ENST00000221922 DCTPP1Q9H773 170 aa27.61■■■□□ 2.01
CCDC9-201ENST00000221922 SPRYD3Q8NCJ5 442 aa27.6■■■□□ 2.01
CCDC9-201ENST00000221922 LMO7Q8WWI1 1683 aa27.6■■■□□ 2.01
CCDC9-201ENST00000221922 ATP10DQ9P241 1426 aa27.6■■■□□ 2.01
CCDC9-201ENST00000221922 TAF7Q15545 349 aaPredicted RBP27.6■■■□□ 2.01
CCDC9-201ENST00000221922 CEMIPQ8WUJ3 1361 aa27.59■■■□□ 2.01
CCDC9-201ENST00000221922 TMEM94Q12767 1356 aa27.58■■■□□ 2.01
CCDC9-201ENST00000221922 DDIT3P35638 169 aa27.56■■■□□ 2
CCDC9-201ENST00000221922 L1TD1Q5T7N2 865 aaKnown RBP27.56■■■□□ 2
CCDC9-201ENST00000221922 STK31Q9BXU1 1019 aa27.56■■■□□ 2
CCDC9-201ENST00000221922 KDM4FA0A1W2PPD8 638 aa27.55■■■□□ 2
CCDC9-201ENST00000221922 ZBTB7CA1YPR0 619 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms