RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 NEXMIFQ5QGS0 1516 aa11.84□□□□□ -0.51
TUBB1-201ENST00000217133 HMOX1P09601 288 aa11.84□□□□□ -0.51
TUBB1-201ENST00000217133 MCM5P33992 734 aa11.84□□□□□ -0.51
TUBB1-201ENST00000217133 GNAI1P63096 354 aa11.84□□□□□ -0.51
TUBB1-201ENST00000217133 TTC22Q5TAA0 569 aa11.84□□□□□ -0.51
TUBB1-201ENST00000217133 LRSAM1Q6UWE0 723 aa11.84□□□□□ -0.51
TUBB1-201ENST00000217133 HDGFL2Q7Z4V5 671 aaPredicted RBP11.84□□□□□ -0.51
TUBB1-201ENST00000217133 PRAM1Q96QH2 718 aa11.84□□□□□ -0.51
TUBB1-201ENST00000217133 MYO3AQ8NEV4 1616 aa11.83□□□□□ -0.51
TUBB1-201ENST00000217133 NCKAP5LQ9HCH0 1330 aa11.83□□□□□ -0.51
TUBB1-201ENST00000217133 METP08581 1390 aa11.83□□□□□ -0.52
TUBB1-201ENST00000217133 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
TUBB1-201ENST00000217133 DYNC1I1O14576 645 aa11.83□□□□□ -0.52
TUBB1-201ENST00000217133 TWISTNBQ3B726 338 aaPredicted RBP11.83□□□□□ -0.52
TUBB1-201ENST00000217133 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
TUBB1-201ENST00000217133 GPT2Q8TD30 523 aa11.83□□□□□ -0.52
TUBB1-201ENST00000217133 MINK1Q8N4C8 1332 aaPredicted RBP11.83□□□□□ -0.52
TUBB1-201ENST00000217133 REC8O95072 547 aa11.83□□□□□ -0.52
TUBB1-201ENST00000217133 NRXN1Q9ULB1 1477 aa11.83□□□□□ -0.52
TUBB1-201ENST00000217133 CYP2E1P05181 493 aaPredicted RBP11.83□□□□□ -0.52
TUBB1-201ENST00000217133 BRPF1P55201 1214 aaPredicted RBP11.83□□□□□ -0.52
TUBB1-201ENST00000217133 SASS6Q6UVJ0 657 aa11.83□□□□□ -0.52
TUBB1-201ENST00000217133 NEURL4Q96JN8 1562 aa11.82□□□□□ -0.52
TUBB1-201ENST00000217133 MBD3O95983 291 aa11.82□□□□□ -0.52
TUBB1-201ENST00000217133 CHAMP1Q96JM3 812 aa11.82□□□□□ -0.52
TUBB1-201ENST00000217133 TMEM63CQ9P1W3 806 aa11.82□□□□□ -0.52
TUBB1-201ENST00000217133 QRICH2Q9H0J4 1663 aa11.82□□□□□ -0.52
TUBB1-201ENST00000217133 HDGFP51858 240 aaKnown RBP11.82□□□□□ -0.52
TUBB1-201ENST00000217133 SETBP1Q9Y6X0 1596 aa11.82□□□□□ -0.52
TUBB1-201ENST00000217133 NFE2L2Q16236 605 aa11.81□□□□□ -0.52
TUBB1-201ENST00000217133 AEBP2Q6ZN18 517 aaPredicted RBP11.81□□□□□ -0.52
TUBB1-201ENST00000217133 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.81□□□□□ -0.52
TUBB1-201ENST00000217133 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.81□□□□□ -0.52
TUBB1-201ENST00000217133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.81□□□□□ -0.52
TUBB1-201ENST00000217133 SYAP1Q96A49 352 aaPredicted RBP11.81□□□□□ -0.52
TUBB1-201ENST00000217133 DCTPP1Q9H773 170 aa11.81□□□□□ -0.52
TUBB1-201ENST00000217133 SDSP20132 328 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 KIAA2012Q0VF49 1180 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 USP32Q8NFA0 1604 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 ZFYVE9O95405 1425 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 MED14O60244 1454 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 ADAMTSL3P82987 1691 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 NEK4P51957 841 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 NOL8Q76FK4 1167 aaKnown RBP11.8□□□□□ -0.52
TUBB1-201ENST00000217133 ANKLE2Q86XL3 938 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 OTUD7AQ8TE49 926 aaPredicted RBP11.8□□□□□ -0.52
TUBB1-201ENST00000217133 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 ABCC4O15439 1325 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 ATAD2Q6PL18 1390 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 FOXD4L6Q3SYB3 417 aaPredicted RBP11.8□□□□□ -0.52
TUBB1-201ENST00000217133 FOXD4L3Q6VB84 417 aaPredicted RBP11.8□□□□□ -0.52
TUBB1-201ENST00000217133 TSPY26PQ9H489 355 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 IFT57Q9NWB7 429 aa11.8□□□□□ -0.52
TUBB1-201ENST00000217133 SMARCA5O60264 1052 aaPredicted RBP11.79□□□□□ -0.52
TUBB1-201ENST00000217133 FBLN1P23142 703 aa11.79□□□□□ -0.52
TUBB1-201ENST00000217133 PHACTR3Q96KR7 559 aa11.79□□□□□ -0.52
TUBB1-201ENST00000217133 AK9Q5TCS8 1911 aa11.79□□□□□ -0.52
TUBB1-201ENST00000217133 MPNDQ8N594 471 aa11.79□□□□□ -0.52
TUBB1-201ENST00000217133 ERC2O15083 957 aa11.79□□□□□ -0.52
TUBB1-201ENST00000217133 NSFL1CQ9UNZ2 370 aaKnown RBP11.79□□□□□ -0.52
TUBB1-201ENST00000217133 ZDHHC9Q9Y397 364 aa11.79□□□□□ -0.52
TUBB1-201ENST00000217133 PTCH1Q13635 1447 aa11.78□□□□□ -0.52
TUBB1-201ENST00000217133 TPRNQ4KMQ1 711 aa11.78□□□□□ -0.52
TUBB1-201ENST00000217133 PIK3R4Q99570 1358 aa11.78□□□□□ -0.52
TUBB1-201ENST00000217133 C8orf58Q8NAV2 365 aa11.78□□□□□ -0.52
TUBB1-201ENST00000217133 PRDM10Q9NQV6 1147 aa11.78□□□□□ -0.52
TUBB1-201ENST00000217133 LMOD3Q0VAK6 560 aa11.77□□□□□ -0.52
TUBB1-201ENST00000217133 ADGRB1O14514 1584 aa11.77□□□□□ -0.52
TUBB1-201ENST00000217133 TULP4Q9NRJ4 1543 aa11.77□□□□□ -0.52
TUBB1-201ENST00000217133 AMOTL2Q9Y2J4 779 aa11.77□□□□□ -0.53
TUBB1-201ENST00000217133 PPLO60437 1756 aa11.77□□□□□ -0.53
TUBB1-201ENST00000217133 PHF14O94880 888 aa11.77□□□□□ -0.53
TUBB1-201ENST00000217133 RPAP2Q8IXW5 612 aaPredicted RBP11.77□□□□□ -0.53
TUBB1-201ENST00000217133 ANKRD44Q8N8A2 993 aa11.77□□□□□ -0.53
TUBB1-201ENST00000217133 COL3A1P02461 1466 aaPredicted RBP11.77□□□□□ -0.53
TUBB1-201ENST00000217133 MCCP23508 829 aa11.76□□□□□ -0.53
TUBB1-201ENST00000217133 SMAP1Q8IYB5 467 aaPredicted RBP11.76□□□□□ -0.53
TUBB1-201ENST00000217133 TMX3Q96JJ7 454 aa11.76□□□□□ -0.53
TUBB1-201ENST00000217133 CABP1Q9NZU7 370 aa11.76□□□□□ -0.53
TUBB1-201ENST00000217133 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.76□□□□□ -0.53
TUBB1-201ENST00000217133 YTHDC2Q9H6S0 1430 aaKnown RBP11.76□□□□□ -0.53
TUBB1-201ENST00000217133 KCNA6P17658 529 aa11.76□□□□□ -0.53
TUBB1-201ENST00000217133 PRDM4Q9UKN5 801 aa11.75□□□□□ -0.53
TUBB1-201ENST00000217133 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
TUBB1-201ENST00000217133 POLKQ9UBT6 870 aa11.75□□□□□ -0.53
TUBB1-201ENST00000217133 HMMRO75330 724 aa11.74□□□□□ -0.53
TUBB1-201ENST00000217133 MCM2P49736 904 aa11.74□□□□□ -0.53
TUBB1-201ENST00000217133 ADAMTS13Q76LX8 1427 aa11.74□□□□□ -0.53
TUBB1-201ENST00000217133 ALKQ9UM73 1620 aa11.74□□□□□ -0.53
TUBB1-201ENST00000217133 UBR1Q8IWV7 1749 aa11.74□□□□□ -0.53
TUBB1-201ENST00000217133 CEP170BQ9Y4F5 1589 aaPredicted RBP11.74□□□□□ -0.53
TUBB1-201ENST00000217133 HAP1P54257 671 aaPredicted RBP11.74□□□□□ -0.53
TUBB1-201ENST00000217133 DCTN1Q14203 1278 aa11.74□□□□□ -0.53
TUBB1-201ENST00000217133 GDPD2Q9HCC8 539 aa11.74□□□□□ -0.53
TUBB1-201ENST00000217133 IFT172Q9UG01 1749 aa11.74□□□□□ -0.53
TUBB1-201ENST00000217133 CEP85Q6P2H3 762 aa11.73□□□□□ -0.53
TUBB1-201ENST00000217133 CDK19Q9BWU1 502 aa11.73□□□□□ -0.53
TUBB1-201ENST00000217133 PNPLA6Q8IY17 1366 aa11.73□□□□□ -0.53
TUBB1-201ENST00000217133 FAM83GA6ND36 823 aa11.73□□□□□ -0.53
TUBB1-201ENST00000217133 HMGN5P82970 282 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms