RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Gm7361D3Z6R1 267 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 5031410I06RikE9Q4E0 267 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Gm1979E9QAN3 267 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Gm5862K7N5V5 267 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Gm10220K7N660 267 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Trim28Q62318 834 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Rsph6aQ8CDR2 708 aa18.81■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Emilin1Q99K41 1017 aa18.8■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Tns2Q8CGB6 1400 aa18.79■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Ppp1r15aP17564 657 aa18.79■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Plin1Q8CGN5 517 aa18.79■□□□□ 0.6
Ldb3-207ENSMUST00000227819 IncenpQ9WU62 880 aa18.79■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Cald1E9QA15 768 aaKnown RBP18.78■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Fchsd2Q3USJ8 740 aa18.78■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Eif3bQ8JZQ9 803 aaKnown RBP18.78■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.77■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Bicdl1A0JNT9 577 aa18.77■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Plekhg5Q66T02 1073 aa18.77■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Igsf1Q7TQA1 1317 aa18.77■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Slc5a1Q8C3K6 665 aa18.77■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Hmgb2P30681 210 aaKnown RBP18.76■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Crb1Q8VHS2 1405 aa18.76■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Tjp1P39447 1745 aaKnown RBP18.75■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Chrna2Q91X60 512 aa18.75■□□□□ 0.59
Ldb3-207ENSMUST00000227819 MeiocA2AG06 965 aa18.74■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Asic4Q7TNS7 539 aa18.74■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Slc12a5Q91V14 1138 aa18.74■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Msl1Q6PDM1 616 aa18.73■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Phkg2Q9DB30 406 aa18.73■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Hirip3Q8BLH7 601 aa18.72■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Hdac6Q9Z2V5 1149 aa18.72■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Zswim8Q3UHH1 1832 aaKnown RBP18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Jdp2P97875 163 aa18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Las1lA2BE28 776 aaKnown RBP18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Rad23bP54728 416 aa18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Ints5Q8CHT3 1018 aa18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Pdzd9Q9D9M4 266 aa18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Gsdma3Q5Y4Y6 464 aa18.7■□□□□ 0.58
Ldb3-207ENSMUST00000227819 ErfeQ6PGN1 340 aa18.7■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Ppm1fQ8CGA0 452 aa18.7■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Mcm10Q0VBD2 885 aa18.69■□□□□ 0.58
Ldb3-207ENSMUST00000227819 P2rx7Q9Z1M0 595 aa18.69■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Chmp7Q8R1T1 451 aa18.68■□□□□ 0.58
Ldb3-207ENSMUST00000227819 HypkQ9CR41 129 aa18.67■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Mtfr1lQ9CWE0 289 aa18.67■□□□□ 0.58
Ldb3-207ENSMUST00000227819 TnikP83510 1323 aa18.67■□□□□ 0.58
Ldb3-207ENSMUST00000227819 CoblQ5NBX1 1337 aaKnown RBP18.67■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Lrp5Q91VN0 1614 aa18.66■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Zcwpw1Q6IR42 630 aa18.66■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Ssfa2Q922B9 1252 aa18.66■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Atg3Q9CPX6 314 aa18.66■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Col23a1Q8K4G2 532 aa18.65■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Amotl1Q9D4H4 968 aa18.65■□□□□ 0.58
Ldb3-207ENSMUST00000227819 PalmQ9Z0P4 383 aa18.65■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Aox2Q5SGK3 1345 aa18.64■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Gm13023A2A8N2 498 aa18.64■□□□□ 0.57
Ldb3-207ENSMUST00000227819 NppbP40753 121 aa18.64■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Smarcc1P97496 1104 aa18.63■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Jmjd4Q8BFT6 427 aa18.63■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Egfem1Q8C088 590 aa18.63■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Sumf1Q8R0F3 372 aa18.63■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Zfp777B9EKF4 885 aa18.62■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Prom2Q3UUY6 835 aa18.62■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Cap2Q9CYT6 476 aa18.62■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Usp21Q9QZL6 566 aa18.62■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Magea6O89010 325 aa18.61■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Magea3Q6T340 320 aa18.61■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Dcaf5Q80T85 946 aa18.61■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Spef2Q8C9J3 1734 aa18.61■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Sned1Q70E20 1403 aa18.6■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Ubr3Q5U430 1889 aa18.6■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Nkx2-3P97334 362 aa18.59■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Ccdc155Q80VJ8 648 aa18.59■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Miga2Q8BK03 593 aa18.59■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Msh6P54276 1358 aaKnown RBP18.59■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Col11a2Q64739 1736 aa18.59■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Ppef1O35655 650 aa18.58■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Ppp2r1aQ76MZ3 589 aa18.58■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Ubr2Q6WKZ8 1755 aa18.57■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Sos1Q62245 1319 aa18.57■□□□□ 0.56
Ldb3-207ENSMUST00000227819 C4bP01029 1738 aa18.56■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Smg7Q5RJH6 1138 aaKnown RBP18.56■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Nlrp6Q91WS2 869 aa18.56■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Mapk8ip2Q9ERE9 830 aa18.56■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Snap23O09044 210 aa18.55■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Rnf180Q3U827 592 aa18.55■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Znrd1-asQ8R0E5 213 aa18.55■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Stk31Q99MW1 1018 aa18.55■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Spata31d1bE9QA57 1361 aa18.55■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Plch1Q4KWH5 1682 aa18.54■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Tsen2Q6P7W5 460 aa18.54■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Sgip1Q8VD37 806 aa18.54■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Mrps5Q99N87 432 aaKnown RBP18.53■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Trpm3Q5F4S9 1721 aa18.52■□□□□ 0.56
Ldb3-207ENSMUST00000227819 AceP09470 1312 aa18.52■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Rab11fip3Q8CHD8 1047 aa18.52■□□□□ 0.55
Ldb3-207ENSMUST00000227819 CpzQ8R4V4 654 aa18.52■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Kiaa1107Q80TK0 1369 aa18.51■□□□□ 0.55
Ldb3-207ENSMUST00000227819 TmpoQ61033 693 aaKnown RBP18.51■□□□□ 0.55
Ldb3-207ENSMUST00000227819 RtcbQ99LF4 505 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms