RNA–Protein interactions for RNA: ENSMUST00000173004.1

Lsm2-207, Transcript of U6 snRNA-associated Sm-like protein LSm2, mousemouse

TSL 1 (best) BASIC

Gene Lsm2, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2-207ENSMUST00000173004 Gm16486A0A1D5RMD1 1434 aa17.44■□□□□ 0.38
Lsm2-207ENSMUST00000173004 Tgfb2P27090 414 aa17.42■□□□□ 0.38
Lsm2-207ENSMUST00000173004 Cyp2c67Q569X9 491 aa17.42■□□□□ 0.38
Lsm2-207ENSMUST00000173004 SnrkQ8VDU5 748 aa17.42■□□□□ 0.38
Lsm2-207ENSMUST00000173004 Tmf1B9EKI3 1091 aa17.4■□□□□ 0.38
Lsm2-207ENSMUST00000173004 FocadA2AKG8 1798 aa17.4■□□□□ 0.38
Lsm2-207ENSMUST00000173004 Mex3cQ05A36 652 aaKnown RBP17.39■□□□□ 0.37
Lsm2-207ENSMUST00000173004 Zranb3Q6NZP1 1069 aa17.39■□□□□ 0.37
Lsm2-207ENSMUST00000173004 DaglaQ6WQJ1 1044 aa17.39■□□□□ 0.37
Lsm2-207ENSMUST00000173004 CpzQ8R4V4 654 aa17.39■□□□□ 0.37
Lsm2-207ENSMUST00000173004 Cabp4Q8VHC5 271 aa17.38■□□□□ 0.37
Lsm2-207ENSMUST00000173004 Znf335A2A5K6 1337 aa17.38■□□□□ 0.37
Lsm2-207ENSMUST00000173004 Kif16bB1AVY7 1312 aa17.38■□□□□ 0.37
Lsm2-207ENSMUST00000173004 Col15a1O35206 1367 aa17.37■□□□□ 0.37
Lsm2-207ENSMUST00000173004 Plekhd1B2RPU2 505 aa17.36■□□□□ 0.37
Lsm2-207ENSMUST00000173004 Elp1Q7TT37 1333 aaKnown RBP17.36■□□□□ 0.37
Lsm2-207ENSMUST00000173004 TrhQ62361 256 aa17.35■□□□□ 0.37
Lsm2-207ENSMUST00000173004 Ahnak2E9PYB0 1738 aaKnown RBP17.35■□□□□ 0.37
Lsm2-207ENSMUST00000173004 NppbP40753 121 aa17.34■□□□□ 0.37
Lsm2-207ENSMUST00000173004 B4galnt4Q766D5 1034 aa17.34■□□□□ 0.37
Lsm2-207ENSMUST00000173004 Fam50bQ9WTJ8 334 aa17.33■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Klrk1O54709 232 aa17.32■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Nedd4P46935 887 aaKnown RBP17.32■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Micall1Q8BGT6 870 aa17.32■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Cc2d1aQ8K1A6 943 aa17.32■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Nphp4P59240 1425 aa17.31■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Bicdl1A0JNT9 577 aa17.31■□□□□ 0.36
Lsm2-207ENSMUST00000173004 EgfrQ01279 1210 aa17.31■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Plch1Q4KWH5 1682 aa17.3■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Fam83gQ5SWY7 812 aa17.3■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Klc3Q91W40 508 aa17.3■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Hmgb2P30681 210 aaKnown RBP17.29■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Ano8Q6PB70 1060 aa17.29■□□□□ 0.36
Lsm2-207ENSMUST00000173004 CenpjQ569L8 1344 aa17.28■□□□□ 0.36
Lsm2-207ENSMUST00000173004 CoblQ5NBX1 1337 aaKnown RBP17.28■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Tlr8P58682 1032 aa17.28■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Gm21680A0A0G2JGR8 267 aa17.27■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Foxd1Q61345 456 aa17.27■□□□□ 0.36
Lsm2-207ENSMUST00000173004 PdgfdQ925I7 370 aa17.27■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Gtf2e1Q9D0D5 440 aa17.27■□□□□ 0.36
Lsm2-207ENSMUST00000173004 Gm13023A2A8N2 498 aa17.26■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Adgrb1Q3UHD1 1582 aa17.26■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Spata31d1bE9QA57 1361 aa17.26■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Zbtb4Q5F293 982 aa17.25■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Ildr1Q8CBR1 537 aa17.25■□□□□ 0.35
Lsm2-207ENSMUST00000173004 ScaperF8VQ70 1398 aaKnown RBP17.25■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Adcy9P51830 1353 aa17.25■□□□□ 0.35
Lsm2-207ENSMUST00000173004 1810065E05RikQ5NC41 235 aa17.24■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Larp1Q6ZQ58 1072 aaKnown RBP17.24■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Map2P20357 1828 aa17.24■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Togaram1Q6A070 1776 aaKnown RBP17.23■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Col24a1Q30D77 1733 aa17.23■□□□□ 0.35
Lsm2-207ENSMUST00000173004 FanciQ8K368 1330 aa17.22■□□□□ 0.35
Lsm2-207ENSMUST00000173004 VegfbP49766 207 aa17.22■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Klhdc4Q921I2 584 aa17.22■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Pik3ap1Q9EQ32 811 aa17.22■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Exosc9Q9JHI7 438 aaKnown RBP17.22■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Setdb1O88974 1307 aa17.21■□□□□ 0.35
Lsm2-207ENSMUST00000173004 Tspoap1Q7TNF8 1846 aa17.2■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Pde3aQ9Z0X4 1141 aa17.2■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Col11a2Q64739 1736 aa17.2■□□□□ 0.34
Lsm2-207ENSMUST00000173004 XpcP51612 930 aa17.19■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Gjd4Q8BSD4 364 aa17.19■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Ubr1O70481 1757 aa17.19■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Ubr3Q5U430 1889 aa17.18■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Usp19Q3UJD6 1360 aa17.18■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Gm10471E9Q1C7 252 aa17.18■□□□□ 0.34
Lsm2-207ENSMUST00000173004 ApobrQ8VBT6 942 aa17.18■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Speer4bQ9D9F7 267 aa17.18■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Slurp2P0DP59 97 aa17.17■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Cnga1P29974 684 aa17.17■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Cdk12Q14AX6 1484 aaKnown RBP17.17■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Fstl1Q62356 306 aa17.16■□□□□ 0.34
Lsm2-207ENSMUST00000173004 TkfcQ8VC30 578 aa17.16■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Ppp1r3fQ9JIG4 799 aa17.15■□□□□ 0.34
Lsm2-207ENSMUST00000173004 Chd4Q6PDQ2 1915 aaKnown RBP17.14■□□□□ 0.33
Lsm2-207ENSMUST00000173004 Hoxc9P09633 260 aa17.14■□□□□ 0.33
Lsm2-207ENSMUST00000173004 Dusp27Q148W8 1138 aa17.14■□□□□ 0.33
Lsm2-207ENSMUST00000173004 Ccnl1Q52KE7 532 aaKnown RBP17.14■□□□□ 0.33
Lsm2-207ENSMUST00000173004 Ciapin1Q8WTY4 309 aa17.14■□□□□ 0.33
Lsm2-207ENSMUST00000173004 Cfap70D3YVL2 1141 aa17.12■□□□□ 0.33
Lsm2-207ENSMUST00000173004 StrcQ8VIM6 1809 aa17.12■□□□□ 0.33
Lsm2-207ENSMUST00000173004 Kdm6aO70546 1401 aa17.12■□□□□ 0.33
Lsm2-207ENSMUST00000173004 C4bP01029 1738 aa17.11■□□□□ 0.33
Lsm2-207ENSMUST00000173004 Cdca7Q9D0M2 382 aa17.11■□□□□ 0.33
Lsm2-207ENSMUST00000173004 Atf5O70191 283 aa17.1■□□□□ 0.33
Lsm2-207ENSMUST00000173004 CfhP06909 1234 aa17.1■□□□□ 0.33
Lsm2-207ENSMUST00000173004 Msh6P54276 1358 aaKnown RBP17.1■□□□□ 0.33
Lsm2-207ENSMUST00000173004 IarsQ8BU30 1262 aa17.09■□□□□ 0.33
Lsm2-207ENSMUST00000173004 CemipQ8BI06 1361 aa17.09■□□□□ 0.33
Lsm2-207ENSMUST00000173004 Frmpd3A0A140LIW3 1774 aa17.09■□□□□ 0.33
Lsm2-207ENSMUST00000173004 Thsd7bQ6P4U0 1607 aa17.07■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Smarcc1P97496 1104 aa17.06■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Miga2Q8BK03 593 aa17.06■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Trpm3Q5F4S9 1721 aa17.05■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Scn7aB1AYL1 1681 aa17.05■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Ccne1Q61457 408 aa17.05■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Znf428Q8C1M2 176 aa17.05■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Srcin1Q9QWI6 1250 aa17.05■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Hdac6Q9Z2V5 1149 aa17.05■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms