RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Gtpbp6Q3U6U5 514 aa11.34□□□□□ -0.59
Trim40-203ENSMUST00000172711 Ankrd13dQ6PD24 605 aa11.34□□□□□ -0.59
Trim40-203ENSMUST00000172711 Npm3Q9CPP0 175 aaKnown RBP11.34□□□□□ -0.59
Trim40-203ENSMUST00000172711 Hirip3Q8BLH7 601 aa11.33□□□□□ -0.6
Trim40-203ENSMUST00000172711 Fam50bQ9WTJ8 334 aa11.33□□□□□ -0.6
Trim40-203ENSMUST00000172711 Cc2d1aQ8K1A6 943 aa11.32□□□□□ -0.6
Trim40-203ENSMUST00000172711 Parp14Q2EMV9 1817 aa11.31□□□□□ -0.6
Trim40-203ENSMUST00000172711 Gm10471E9Q1C7 252 aa11.31□□□□□ -0.6
Trim40-203ENSMUST00000172711 Fchsd2Q3USJ8 740 aa11.31□□□□□ -0.6
Trim40-203ENSMUST00000172711 Birc3O08863 600 aa11.3□□□□□ -0.6
Trim40-203ENSMUST00000172711 Abcb7Q61102 752 aaKnown RBP11.3□□□□□ -0.6
Trim40-203ENSMUST00000172711 Ccne1Q61457 408 aa11.3□□□□□ -0.6
Trim40-203ENSMUST00000172711 Elp1Q7TT37 1333 aaKnown RBP11.3□□□□□ -0.6
Trim40-203ENSMUST00000172711 Smg6P61406 1418 aaKnown RBP11.3□□□□□ -0.6
Trim40-203ENSMUST00000172711 Gm21680A0A0G2JGR8 267 aa11.29□□□□□ -0.6
Trim40-203ENSMUST00000172711 Kiaa0319lQ8K135 1048 aa11.29□□□□□ -0.6
Trim40-203ENSMUST00000172711 TkfcQ8VC30 578 aa11.29□□□□□ -0.6
Trim40-203ENSMUST00000172711 IncenpQ9WU62 880 aa11.29□□□□□ -0.6
Trim40-203ENSMUST00000172711 Sgip1Q8VD37 806 aa11.28□□□□□ -0.6
Trim40-203ENSMUST00000172711 Larp1Q6ZQ58 1072 aaKnown RBP11.27□□□□□ -0.61
Trim40-203ENSMUST00000172711 Rps6ka4Q9Z2B9 773 aa11.27□□□□□ -0.61
Trim40-203ENSMUST00000172711 PappaQ8R4K8 1624 aa11.26□□□□□ -0.61
Trim40-203ENSMUST00000172711 ErfeQ6PGN1 340 aa11.26□□□□□ -0.61
Trim40-203ENSMUST00000172711 Speer4bQ9D9F7 267 aa11.26□□□□□ -0.61
Trim40-203ENSMUST00000172711 Msl1Q6PDM1 616 aa11.25□□□□□ -0.61
Trim40-203ENSMUST00000172711 Ppp1r37Q8BKR5 712 aa11.25□□□□□ -0.61
Trim40-203ENSMUST00000172711 Zdbf2Q5SS00 2493 aaKnown RBP11.24□□□□□ -0.61
Trim40-203ENSMUST00000172711 Igsf1Q7TQA1 1317 aa11.24□□□□□ -0.61
Trim40-203ENSMUST00000172711 Rnf180Q3U827 592 aa11.24□□□□□ -0.61
Trim40-203ENSMUST00000172711 Prom2Q3UUY6 835 aa11.24□□□□□ -0.61
Trim40-203ENSMUST00000172711 Mtfr1lQ9CWE0 289 aa11.24□□□□□ -0.61
Trim40-203ENSMUST00000172711 Usp21Q9QZL6 566 aa11.24□□□□□ -0.61
Trim40-203ENSMUST00000172711 Simc1E9Q6E9 1354 aa11.23□□□□□ -0.61
Trim40-203ENSMUST00000172711 Ppm1fQ8CGA0 452 aa11.23□□□□□ -0.61
Trim40-203ENSMUST00000172711 Magea6O89010 325 aa11.22□□□□□ -0.61
Trim40-203ENSMUST00000172711 Magea3Q6T340 320 aa11.22□□□□□ -0.61
Trim40-203ENSMUST00000172711 Col23a1Q8K4G2 532 aa11.22□□□□□ -0.61
Trim40-203ENSMUST00000172711 Slc24a1Q91WD8 1130 aa11.22□□□□□ -0.61
Trim40-203ENSMUST00000172711 Tjp1P39447 1745 aaKnown RBP11.22□□□□□ -0.61
Trim40-203ENSMUST00000172711 MeiocA2AG06 965 aa11.21□□□□□ -0.61
Trim40-203ENSMUST00000172711 Aplp2Q06335 707 aa11.21□□□□□ -0.61
Trim40-203ENSMUST00000172711 Scaf1Q5U4C3 1256 aaKnown RBP11.21□□□□□ -0.61
Trim40-203ENSMUST00000172711 Skida1Q80YR3 822 aa11.21□□□□□ -0.61
Trim40-203ENSMUST00000172711 ApobrQ8VBT6 942 aa11.21□□□□□ -0.61
Trim40-203ENSMUST00000172711 Klc3Q91W40 508 aa11.21□□□□□ -0.61
Trim40-203ENSMUST00000172711 Rpgrip1Q9EPQ2 1331 aa11.21□□□□□ -0.62
Trim40-203ENSMUST00000172711 ThemisQ8BGW0 636 aa11.2□□□□□ -0.62
Trim40-203ENSMUST00000172711 Sned1Q70E20 1403 aa11.2□□□□□ -0.62
Trim40-203ENSMUST00000172711 Ccnl1Q52KE7 532 aaKnown RBP11.19□□□□□ -0.62
Trim40-203ENSMUST00000172711 Ubr3Q5U430 1889 aa11.19□□□□□ -0.62
Trim40-203ENSMUST00000172711 Col11a2Q64739 1736 aa11.19□□□□□ -0.62
Trim40-203ENSMUST00000172711 Bicdl1A0JNT9 577 aa11.19□□□□□ -0.62
Trim40-203ENSMUST00000172711 Jdp2P97875 163 aa11.19□□□□□ -0.62
Trim40-203ENSMUST00000172711 Sumf1Q8R0F3 372 aa11.19□□□□□ -0.62
Trim40-203ENSMUST00000172711 Kdm6aO70546 1401 aa11.18□□□□□ -0.62
Trim40-203ENSMUST00000172711 UtrnE9Q6R7 3430 aa11.18□□□□□ -0.62
Trim40-203ENSMUST00000172711 Eya1P97767 591 aa11.18□□□□□ -0.62
Trim40-203ENSMUST00000172711 4930572O03RikQ8C5Y0 211 aa11.18□□□□□ -0.62
Trim40-203ENSMUST00000172711 Casz1Q9CWL2 1761 aa11.18□□□□□ -0.62
Trim40-203ENSMUST00000172711 Mrps5Q99N87 432 aaKnown RBP11.17□□□□□ -0.62
Trim40-203ENSMUST00000172711 Tns2Q8CGB6 1400 aa11.17□□□□□ -0.62
Trim40-203ENSMUST00000172711 IbtkQ6ZPR6 1352 aaKnown RBP11.16□□□□□ -0.62
Trim40-203ENSMUST00000172711 Plch1Q4KWH5 1682 aa11.16□□□□□ -0.62
Trim40-203ENSMUST00000172711 Hoxb7P09024 217 aa11.16□□□□□ -0.62
Trim40-203ENSMUST00000172711 Gpr162Q3UN16 588 aa11.16□□□□□ -0.62
Trim40-203ENSMUST00000172711 Znrd1-asQ8R0E5 213 aa11.16□□□□□ -0.62
Trim40-203ENSMUST00000172711 Togaram1Q6A070 1776 aaKnown RBP11.16□□□□□ -0.62
Trim40-203ENSMUST00000172711 Crb1Q8VHS2 1405 aa11.15□□□□□ -0.62
Trim40-203ENSMUST00000172711 CoblQ5NBX1 1337 aaKnown RBP11.15□□□□□ -0.62
Trim40-203ENSMUST00000172711 Nkx1-1G3UXB3 402 aa11.14□□□□□ -0.63
Trim40-203ENSMUST00000172711 Eif4a2P10630 407 aa11.14□□□□□ -0.63
Trim40-203ENSMUST00000172711 Ints5Q8CHT3 1018 aa11.14□□□□□ -0.63
Trim40-203ENSMUST00000172711 C4bP01029 1738 aa11.14□□□□□ -0.63
Trim40-203ENSMUST00000172711 Gm13023A2A8N2 498 aa11.14□□□□□ -0.63
Trim40-203ENSMUST00000172711 Sin3aQ60520 1274 aaKnown RBP11.14□□□□□ -0.63
Trim40-203ENSMUST00000172711 PrxO55103 1391 aa11.13□□□□□ -0.63
Trim40-203ENSMUST00000172711 Gm21663A0A0G2JE01 267 aa11.13□□□□□ -0.63
Trim40-203ENSMUST00000172711 Gm7361D3Z6R1 267 aa11.13□□□□□ -0.63
Trim40-203ENSMUST00000172711 5031410I06RikE9Q4E0 267 aa11.13□□□□□ -0.63
Trim40-203ENSMUST00000172711 Gm1979E9QAN3 267 aa11.13□□□□□ -0.63
Trim40-203ENSMUST00000172711 Gm5862K7N5V5 267 aa11.13□□□□□ -0.63
Trim40-203ENSMUST00000172711 Gm10220K7N660 267 aa11.13□□□□□ -0.63
Trim40-203ENSMUST00000172711 Golgb1E9PVZ8 3238 aa11.12□□□□□ -0.63
Trim40-203ENSMUST00000172711 Rad17Q6NXW6 688 aa11.12□□□□□ -0.63
Trim40-203ENSMUST00000172711 Pank3Q8R2W9 370 aa11.12□□□□□ -0.63
Trim40-203ENSMUST00000172711 CpzQ8R4V4 654 aa11.12□□□□□ -0.63
Trim40-203ENSMUST00000172711 Dcaf11Q91VU6 549 aa11.12□□□□□ -0.63
Trim40-203ENSMUST00000172711 Hdac6Q9Z2V5 1149 aa11.12□□□□□ -0.63
Trim40-203ENSMUST00000172711 Trpm3Q5F4S9 1721 aa11.12□□□□□ -0.63
Trim40-203ENSMUST00000172711 Spef2Q8C9J3 1734 aa11.12□□□□□ -0.63
Trim40-203ENSMUST00000172711 Asic4Q7TNS7 539 aa11.11□□□□□ -0.63
Trim40-203ENSMUST00000172711 Camkk2Q8C078 588 aa11.11□□□□□ -0.63
Trim40-203ENSMUST00000172711 Rnaseh2aQ9CWY8 301 aa11.11□□□□□ -0.63
Trim40-203ENSMUST00000172711 Inpp5dQ9ES52 1191 aa11.11□□□□□ -0.63
Trim40-203ENSMUST00000172711 Kiaa1107Q80TK0 1369 aa11.11□□□□□ -0.63
Trim40-203ENSMUST00000172711 StrcQ8VIM6 1809 aa11.1□□□□□ -0.63
Trim40-203ENSMUST00000172711 NppbP40753 121 aa11.1□□□□□ -0.63
Trim40-203ENSMUST00000172711 Tlr8P58682 1032 aa11.1□□□□□ -0.63
Trim40-203ENSMUST00000172711 MpripP97434 1024 aa11.1□□□□□ -0.63
Trim40-203ENSMUST00000172711 Slc5a1Q8C3K6 665 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms