RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Fam13aQ8BGI4 693 aa18.48■□□□□ 0.55
Shank1-201ENSMUST00000107934 Cep57l1Q8VDS7 400 aa18.48■□□□□ 0.55
Shank1-201ENSMUST00000107934 Map4k4P97820 1233 aaKnown RBP18.48■□□□□ 0.55
Shank1-201ENSMUST00000107934 Slc5a1Q8C3K6 665 aa18.48■□□□□ 0.55
Shank1-201ENSMUST00000107934 Smarca5Q91ZW3 1051 aaKnown RBP18.48■□□□□ 0.55
Shank1-201ENSMUST00000107934 Ripk4Q9ERK0 786 aa18.48■□□□□ 0.55
Shank1-201ENSMUST00000107934 Sos1Q62245 1319 aa18.48■□□□□ 0.55
Shank1-201ENSMUST00000107934 SfswapQ3USH5 945 aaKnown RBP18.48■□□□□ 0.55
Shank1-201ENSMUST00000107934 Kiaa0753Q6A000 959 aa18.48■□□□□ 0.55
Shank1-201ENSMUST00000107934 Abcd1P48410 736 aa18.47■□□□□ 0.55
Shank1-201ENSMUST00000107934 Irgm2A0A140LIF8 407 aa18.47■□□□□ 0.55
Shank1-201ENSMUST00000107934 Caskin1Q6P9K8 1431 aa18.47■□□□□ 0.55
Shank1-201ENSMUST00000107934 Klc3Q91W40 508 aa18.47■□□□□ 0.55
Shank1-201ENSMUST00000107934 Eif5P59325 429 aaKnown RBP18.46■□□□□ 0.55
Shank1-201ENSMUST00000107934 VeztQ3ZK22 780 aa18.46■□□□□ 0.55
Shank1-201ENSMUST00000107934 Slc26a8Q8R0C3 999 aa18.46■□□□□ 0.55
Shank1-201ENSMUST00000107934 Abcc5Q9R1X5 1436 aa18.46■□□□□ 0.55
Shank1-201ENSMUST00000107934 Ccdc155Q80VJ8 648 aa18.46■□□□□ 0.55
Shank1-201ENSMUST00000107934 GpkowQ56A08 488 aa18.46■□□□□ 0.55
Shank1-201ENSMUST00000107934 Cep112Q5PR68 954 aa18.46■□□□□ 0.55
Shank1-201ENSMUST00000107934 Wdr62Q3U3T8 1523 aa18.45■□□□□ 0.54
Shank1-201ENSMUST00000107934 Vps37dQ810I0 261 aa18.45■□□□□ 0.54
Shank1-201ENSMUST00000107934 Wasf1Q8R5H6 559 aa18.45■□□□□ 0.54
Shank1-201ENSMUST00000107934 Ercc6lQ8BHK9 1240 aa18.45■□□□□ 0.54
Shank1-201ENSMUST00000107934 Iqca1Q9CUL5 857 aa18.45■□□□□ 0.54
Shank1-201ENSMUST00000107934 Ccne1Q61457 408 aa18.45■□□□□ 0.54
Shank1-201ENSMUST00000107934 Ttc5Q99LG4 440 aa18.45■□□□□ 0.54
Shank1-201ENSMUST00000107934 Tnni2P13412 182 aa18.44■□□□□ 0.54
Shank1-201ENSMUST00000107934 Top2bQ64511 1612 aa18.44■□□□□ 0.54
Shank1-201ENSMUST00000107934 Tmco3Q8BH01 678 aa18.44■□□□□ 0.54
Shank1-201ENSMUST00000107934 Sptbn5F6UCX4 1208 aa18.44■□□□□ 0.54
Shank1-201ENSMUST00000107934 Nup88Q8CEC0 753 aaKnown RBP18.44■□□□□ 0.54
Shank1-201ENSMUST00000107934 Ccdc39Q9D5Y1 937 aa18.44■□□□□ 0.54
Shank1-201ENSMUST00000107934 Bag1Q60739 355 aa18.44■□□□□ 0.54
Shank1-201ENSMUST00000107934 Mum1Q6DID5 682 aa18.44■□□□□ 0.54
Shank1-201ENSMUST00000107934 Slc13a4Q8BZ82 625 aa18.44■□□□□ 0.54
Shank1-201ENSMUST00000107934 Aldh1l1Q8R0Y6 902 aa18.44■□□□□ 0.54
Shank1-201ENSMUST00000107934 Tfip11Q9ERA6 838 aaKnown RBP18.43■□□□□ 0.54
Shank1-201ENSMUST00000107934 Ltv1Q6NSQ7 470 aaKnown RBP18.43■□□□□ 0.54
Shank1-201ENSMUST00000107934 Chaf1aQ9QWF0 911 aa18.43■□□□□ 0.54
Shank1-201ENSMUST00000107934 Grin2aP35436 1464 aa18.43■□□□□ 0.54
Shank1-201ENSMUST00000107934 Ppp6r1Q7TSI3 856 aa18.43■□□□□ 0.54
Shank1-201ENSMUST00000107934 Plcd4Q8K3R3 807 aa18.43■□□□□ 0.54
Shank1-201ENSMUST00000107934 Tspyl2Q7TQI8 677 aa18.43■□□□□ 0.54
Shank1-201ENSMUST00000107934 Nol11Q8BJW5 723 aaKnown RBP18.43■□□□□ 0.54
Shank1-201ENSMUST00000107934 Cdca7Q9D0M2 382 aa18.43■□□□□ 0.54
Shank1-201ENSMUST00000107934 Lmbr1Q9JIT0 490 aa18.43■□□□□ 0.54
Shank1-201ENSMUST00000107934 IbspQ61711 324 aa18.42■□□□□ 0.54
Shank1-201ENSMUST00000107934 Slc5a4bQ91ZP4 660 aa18.42■□□□□ 0.54
Shank1-201ENSMUST00000107934 Atxn3Q9CVD2 355 aa18.42■□□□□ 0.54
Shank1-201ENSMUST00000107934 Larp1Q6ZQ58 1072 aaKnown RBP18.42■□□□□ 0.54
Shank1-201ENSMUST00000107934 Cfap58B2RW38 873 aa18.42■□□□□ 0.54
Shank1-201ENSMUST00000107934 Samm50Q8BGH2 469 aa18.42■□□□□ 0.54
Shank1-201ENSMUST00000107934 Rai14Q9EP71 979 aaKnown RBP18.42■□□□□ 0.54
Shank1-201ENSMUST00000107934 AI481877A2ALV5 1481 aa18.41■□□□□ 0.54
Shank1-201ENSMUST00000107934 Ssr1Q9CY50 286 aaKnown RBP18.41■□□□□ 0.54
Shank1-201ENSMUST00000107934 Zmym3Q9JLM4 1370 aa18.41■□□□□ 0.54
Shank1-201ENSMUST00000107934 Hoxa7P02830 229 aa18.4■□□□□ 0.54
Shank1-201ENSMUST00000107934 Ppip5k2Q6ZQB6 1129 aa18.4■□□□□ 0.54
Shank1-201ENSMUST00000107934 Luc7lQ9CYI4 371 aaKnown RBP18.4■□□□□ 0.54
Shank1-201ENSMUST00000107934 Jmjd4Q8BFT6 427 aa18.4■□□□□ 0.54
Shank1-201ENSMUST00000107934 Ppp1r42Q8R1Z4 357 aa18.4■□□□□ 0.54
Shank1-201ENSMUST00000107934 Ces1hD3Z298 562 aa18.4■□□□□ 0.54
Shank1-201ENSMUST00000107934 Dctn1O08788 1281 aa18.4■□□□□ 0.54
Shank1-201ENSMUST00000107934 Cpa2Q504N0 417 aa18.4■□□□□ 0.54
Shank1-201ENSMUST00000107934 Med4Q9CQA5 270 aa18.4■□□□□ 0.54
Shank1-201ENSMUST00000107934 Igf2bp2Q5SF07 592 aaKnown RBP18.39■□□□□ 0.54
Shank1-201ENSMUST00000107934 Nol7Q9D7Z3 254 aaKnown RBP18.39■□□□□ 0.54
Shank1-201ENSMUST00000107934 Adck5Q80V03 582 aa18.39■□□□□ 0.53
Shank1-201ENSMUST00000107934 Erlin2Q8BFZ9 340 aa18.39■□□□□ 0.53
Shank1-201ENSMUST00000107934 CenphQ9QYM8 241 aa18.39■□□□□ 0.53
Shank1-201ENSMUST00000107934 Gm1043A0A140LJC2 1431 aa18.38■□□□□ 0.53
Shank1-201ENSMUST00000107934 Bag3Q9JLV1 577 aaKnown RBP18.38■□□□□ 0.53
Shank1-201ENSMUST00000107934 ScaperF8VQ70 1398 aaKnown RBP18.38■□□□□ 0.53
Shank1-201ENSMUST00000107934 Mlh3A0A1Y7VMP7 1443 aa18.37■□□□□ 0.53
Shank1-201ENSMUST00000107934 Lamb3Q61087 1168 aa18.37■□□□□ 0.53
Shank1-201ENSMUST00000107934 Ddx58Q6Q899 926 aa18.37■□□□□ 0.53
Shank1-201ENSMUST00000107934 Secisbp2lQ6A098 1086 aaKnown RBP18.37■□□□□ 0.53
Shank1-201ENSMUST00000107934 Lrrfip2Q91WK0 415 aa18.37■□□□□ 0.53
Shank1-201ENSMUST00000107934 Atp10dQ8K2X1 1416 aa18.37■□□□□ 0.53
Shank1-201ENSMUST00000107934 Cep55Q8BT07 462 aa18.37■□□□□ 0.53
Shank1-201ENSMUST00000107934 Pmfbp1Q9WVQ0 1022 aa18.37■□□□□ 0.53
Shank1-201ENSMUST00000107934 Pof1bQ8K4L4 587 aa18.37■□□□□ 0.53
Shank1-201ENSMUST00000107934 Farp2Q91VS8 1065 aa18.37■□□□□ 0.53
Shank1-201ENSMUST00000107934 Nsfl1cQ9CZ44 370 aaKnown RBP18.36■□□□□ 0.53
Shank1-201ENSMUST00000107934 Lamc3Q9R0B6 1581 aa18.36■□□□□ 0.53
Shank1-201ENSMUST00000107934 Irf9Q61179 399 aa18.36■□□□□ 0.53
Shank1-201ENSMUST00000107934 Idi2Q8BFZ6 227 aa18.36■□□□□ 0.53
Shank1-201ENSMUST00000107934 InsrP15208 1372 aa18.36■□□□□ 0.53
Shank1-201ENSMUST00000107934 Fam13bQ8K2H3 851 aa18.36■□□□□ 0.53
Shank1-201ENSMUST00000107934 Ccdc172Q810N9 267 aa18.36■□□□□ 0.53
Shank1-201ENSMUST00000107934 NapbP28663 298 aa18.36■□□□□ 0.53
Shank1-201ENSMUST00000107934 Slc12a5Q91V14 1138 aa18.36■□□□□ 0.53
Shank1-201ENSMUST00000107934 Cfap45Q9D9U9 551 aa18.36■□□□□ 0.53
Shank1-201ENSMUST00000107934 Ssh1Q76I79 1042 aa18.35■□□□□ 0.53
Shank1-201ENSMUST00000107934 Plekhm2Q80TQ5 1018 aa18.35■□□□□ 0.53
Shank1-201ENSMUST00000107934 Phldb2Q8K1N2 1249 aa18.35■□□□□ 0.53
Shank1-201ENSMUST00000107934 Polr3aB2RXC6 1390 aa18.35■□□□□ 0.53
Shank1-201ENSMUST00000107934 Prkar2bP31324 416 aa18.35■□□□□ 0.53
Shank1-201ENSMUST00000107934 Znf287Q9EQB9 759 aa18.35■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 59.3 ms