RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Nos1Q9Z0J4 1429 aa10.39□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Iqgap1Q9JKF1 1657 aaKnown RBP10.38□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Dpp8Q80YA7 892 aa10.38□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Adgrf1Q8VEC3 908 aa10.38□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Cep57l1Q8VDS7 400 aa10.37□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Uggt2E9Q4X2 1504 aa10.37□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Tdrd9Q14BI7 1383 aa10.37□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Las1lA2BE28 776 aaKnown RBP10.36□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Saxo1B1AXP3 476 aa10.36□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Zfp777B9EKF4 885 aa10.36□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Gm20521D3Z5F7 333 aa10.36□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 F11Q91Y47 624 aa10.36□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Adcy10Q8C0T9 1614 aa10.36□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Abcc6Q9R1S7 1498 aa10.36□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Adgrb2Q8CGM1 1561 aa10.35□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Rasa1E9PYG6 1038 aa10.35□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 PtgdrP70263 357 aa10.35□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 GphnQ8BUV3 769 aaKnown RBP10.35□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 NptxrQ99J85 493 aa10.35□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Map3k5O35099 1380 aa10.35□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Nrxn3Q6P9K9 1571 aa10.35□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Spink5Q148R4 1017 aa10.34□□□□□ -0.75
Ccdc47-202ENSMUST00000106865 Setd5Q5XJV7 1441 aa10.33□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Fhdc1Q3ULZ2 1149 aa10.33□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Cyp7a1Q64505 503 aa10.33□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Sart1Q9Z315 806 aaKnown RBP10.33□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Gm1043A0A140LJC2 1431 aa10.33□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Caskin1Q6P9K8 1431 aa10.33□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Gm10563F6WIE4 79 aa10.32□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Krtap3-2Q9D638 99 aa10.32□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Krtap3-3Q9D7P0 99 aa10.32□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Ms4a4bQ9ES61 226 aa10.32□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Asxl1P59598 1514 aa10.32□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Cdk13Q69ZA1 1511 aaKnown RBP10.32□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Naip5Q9R016 1403 aa10.32□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Znf518aB2RRF6 1478 aaKnown RBP10.31□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Chd2E9PZM4 1827 aaKnown RBP10.31□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Topbp1Q6ZQF0 1515 aa10.31□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Eea1Q8BL66 1411 aa10.31□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Kif21bQ9QXL1 1668 aa10.31□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 A0A1L1SQF0 893 aa10.3□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Man1a2P39098 641 aa10.3□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Pik3c2aQ61194 1686 aa10.3□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Cypt2Q6P924 180 aa10.29□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Cts7Q91ZF2 331 aa10.29□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Med1Q925J9 1575 aa10.29□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Fmn2Q9JL04 1578 aa10.29□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Plch2A2AP18 1501 aa10.28□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 DroshaQ5HZJ0 1373 aaKnown RBP10.28□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 NinlQ6ZQ12 1394 aa10.28□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Eva1bQ8K2Y3 164 aa10.28□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Anks4bQ8K3X6 423 aa10.28□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Suv39h2Q9EQQ0 477 aa10.28□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 ClspnQ80YR7 1315 aa10.28□□□□□ -0.76
Ccdc47-202ENSMUST00000106865 Znf511Q6P0X2 227 aa10.27□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Ap3b1Q9Z1T1 1105 aa10.27□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Prss12O08762 761 aa10.26□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 FechP22315 420 aaKnown RBP10.26□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Grxcr1Q50H32 290 aa10.26□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Erbb4Q61527 1308 aa10.25□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Abca17E9PX95 1733 aa10.24□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 AaasP58742 546 aa10.24□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Chmp3Q9CQ10 224 aa10.24□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Kdm5aQ3UXZ9 1690 aa10.24□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 TonslQ6NZL6 1363 aa10.24□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Adgrl1Q80TR1 1466 aa10.23□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Nhsl1Q8CAF4 1587 aa10.23□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Washc4Q3UMB9 1173 aa10.23□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Thsd4Q3UTY6 1018 aa10.23□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Rc3h1Q4VGL6 1130 aaKnown RBP10.23□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Ccnb3Q810T2 1396 aa10.23□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Setd1aE9PYH6 1716 aa10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Myo5cE9Q1F5 1742 aa10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Il13ra1O09030 424 aa10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Tom1O88746 492 aa10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Fgd1P52734 960 aa10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Bms1Q6PGF5 1284 aaKnown RBP10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Ncbp3Q8BZR9 615 aaKnown RBP10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Amigo3Q8C2S7 508 aa10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Spire2Q8K1S6 718 aa10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 SnrkQ8VDU5 748 aa10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 CntlnA2AM05 1397 aa10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Hfm1D3Z4R1 1434 aa10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Thsd7aQ69ZU6 1645 aa10.22□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 ColqO35348 457 aa10.21□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Eif4g2Q62448 906 aaKnown RBP10.21□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Q8C6G1 249 aa10.21□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 AdarQ99MU3 1178 aaKnown RBP10.21□□□□□ -0.77
Ccdc47-202ENSMUST00000106865 Robo2Q7TPD3 1470 aa10.21□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Mast1Q9R1L5 1570 aa10.21□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Klhl34A2AI76 644 aa10.2□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Mbd5B1AYB6 1498 aa10.2□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Sec1P97353 368 aa10.2□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Adamts7Q68SA9 1657 aa10.2□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Sirt1Q923E4 737 aa10.2□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Eif2ak4Q9QZ05 1648 aa10.2□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Wnt7bP28047 349 aa10.19□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Sox18P43680 377 aa10.19□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Zfp617Q91WM0 559 aa10.19□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Prpf40aQ9R1C7 953 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms