RNA–Protein interactions for RNA: ENSMUST00000073961.7

Ptpre-201, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-201ENSMUST00000073961 Larp1Q6ZQ58 1072 aaKnown RBP20.55■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Gps2Q921N8 327 aa20.55■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Gnl2Q99LH1 728 aaKnown RBP20.55■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Gjb2Q00977 226 aa20.54■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Fam13aQ8BGI4 693 aa20.54■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Cep89Q9CZX2 791 aa20.54■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Camsap1A2AHC3 1581 aa20.54■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Paf1Q8K2T8 535 aa20.54■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Kank1E9Q238 1360 aa20.54■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Slc13a4Q8BZ82 625 aa20.53■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Adck5Q80V03 582 aa20.53■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Pof1bQ8K4L4 587 aa20.53■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Magi1Q6RHR9 1471 aa20.53■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Plekhm2Q80TQ5 1018 aa20.53■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Smarca5Q91ZW3 1051 aaKnown RBP20.53■□□□□ 0.88
Ptpre-201ENSMUST00000073961 MicalclQ9D5U9 680 aa20.53■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Rcan3Q9JKK0 239 aa20.53■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Fnbp4Q6ZQ03 1031 aa20.52■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Ncbp3Q8BZR9 615 aaKnown RBP20.52■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Ttc19Q8CC21 365 aa20.52■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Atxn3Q9CVD2 355 aa20.52■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Afap1Q80YS6 731 aa20.52■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Chrna2Q91X60 512 aa20.52■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Phlpp2Q8BXA7 1320 aa20.52■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Map9Q3TRR0 646 aa20.52■□□□□ 0.88
Ptpre-201ENSMUST00000073961 4930572O03RikQ8C5Y0 211 aa20.52■□□□□ 0.88
Ptpre-201ENSMUST00000073961 Gm21663A0A0G2JE01 267 aa20.52■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Gm7361D3Z6R1 267 aa20.52■□□□□ 0.87
Ptpre-201ENSMUST00000073961 5031410I06RikE9Q4E0 267 aa20.52■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Gm1979E9QAN3 267 aa20.52■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Gm5862K7N5V5 267 aa20.52■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Gm10220K7N660 267 aa20.52■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Hvcn1Q3U2S8 269 aa20.52■□□□□ 0.87
Ptpre-201ENSMUST00000073961 AidaQ8C4Q6 305 aa20.52■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Rbm5Q91YE7 815 aaKnown RBP20.52■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Mum1Q6DID5 682 aa20.51■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Lrrc45Q8CIM1 670 aa20.51■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Speer4bQ9D9F7 267 aa20.51■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Ccdc39Q9D5Y1 937 aa20.51■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Naip5Q9R016 1403 aa20.51■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Ttc21bQ0HA38 1315 aa20.51■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Rprd2Q6NXI6 1469 aaKnown RBP20.5■□□□□ 0.87
Ptpre-201ENSMUST00000073961 ZwintQ9CQU5 252 aa20.5■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Mrc2Q64449 1479 aa20.5■□□□□ 0.87
Ptpre-201ENSMUST00000073961 SynmQ70IV5 1561 aa20.5■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Trim55G3X8Y1 545 aa20.5■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Frmpd1A2AKB4 1549 aa20.49■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Caskin1Q6P9K8 1431 aa20.49■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Prkar2bP31324 416 aa20.49■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Ppp1r42Q8R1Z4 357 aa20.49■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Evi5lH3BKQ3 813 aa20.48■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Iqca1Q9CUL5 857 aa20.48■□□□□ 0.87
Ptpre-201ENSMUST00000073961 TnikP83510 1323 aa20.48■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Terf2O35144 541 aa20.48■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Pafah1b1P63005 410 aaKnown RBP20.48■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Slc26a8Q8R0C3 999 aa20.48■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Riok1Q922Q2 567 aa20.48■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Anapc15-psA0A140T8L6 141 aa20.47■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Lrrfip1Q3UZ39 729 aaKnown RBP20.47■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Cep131Q62036 1060 aa20.47■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Znf704Q9ERQ3 566 aa20.47■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Trim30cD3YVI9 513 aa20.47■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Ccar2Q8VDP4 922 aaKnown RBP20.47■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Ccdc181Q80ZU5 509 aa20.47■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Bcl11bQ99PV8 884 aa20.47■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Dnajc2P54103 621 aaKnown RBP20.46■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Fkbp5Q64378 456 aa20.46■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Fam135aQ6NS59 1506 aa20.46■□□□□ 0.87
Ptpre-201ENSMUST00000073961 HnrnpmQ9D0E1 729 aaKnown RBP20.46■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Zmym4A2A791 1549 aaKnown RBP20.46■□□□□ 0.87
Ptpre-201ENSMUST00000073961 Mlh3A0A1Y7VMP7 1443 aa20.45■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Pdcl2Q78Y63 240 aa20.45■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Trim34aQ99PP6 485 aa20.45■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Gm21680A0A0G2JGR8 267 aa20.45■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Tbc1d9Q3UYK3 1264 aa20.44■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Secisbp2lQ6A098 1086 aaKnown RBP20.44■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Pik3c2gO70167 1506 aa20.44■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Pik3r4Q8VD65 1358 aa20.44■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Strn4P58404 760 aa20.44■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Q3UPC7 1272 aa20.43■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Ccdc83Q9D4V3 305 aa20.43■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Mapk8ip1Q9WVI9 707 aa20.43■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Prm3Q62100 101 aa20.43■□□□□ 0.86
Ptpre-201ENSMUST00000073961 IkQ9Z1M8 557 aaKnown RBP20.43■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Mcm3P25206 812 aaKnown RBP20.42■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Tbc1d32Q3URV1 1296 aa20.42■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Rrs1Q9CYH6 365 aaKnown RBP20.42■□□□□ 0.86
Ptpre-201ENSMUST00000073961 RalgapbQ8BQZ4 1484 aa20.42■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Crocc2F6XLV1 1638 aa20.42■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Ncbp1Q3UYV9 790 aaKnown RBP20.42■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Rapgef4Q9EQZ6 1011 aa20.42■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Abcf1Q6P542 837 aaKnown RBP20.42■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Fam43aQ8BUP8 424 aa20.42■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Bag4Q8CI61 457 aa20.42■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Rasa1E9PYG6 1038 aa20.41■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Sf3b2Q3UJB0 878 aaKnown RBP20.41■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Gas2l3Q3UWW6 683 aa20.41■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Plb1Q3TTY0 1478 aa20.41■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Trim25Q61510 634 aaKnown RBP20.41■□□□□ 0.86
Ptpre-201ENSMUST00000073961 Trim11Q99PQ2 467 aa20.41■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms