RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Anp32bQ9EST5 272 aaKnown RBP21.26■□□□□ 0.99
Ubb-201ENSMUST00000019649 TnikP83510 1323 aa21.26■□□□□ 0.99
Ubb-201ENSMUST00000019649 Amotl1Q9D4H4 968 aa21.26■□□□□ 0.99
Ubb-201ENSMUST00000019649 Larp1bA0A0A6YXJ7 370 aaKnown RBP21.25■□□□□ 0.99
Ubb-201ENSMUST00000019649 Plin1Q8CGN5 517 aa21.25■□□□□ 0.99
Ubb-201ENSMUST00000019649 ApobrQ8VBT6 942 aa21.25■□□□□ 0.99
Ubb-201ENSMUST00000019649 Phkg2Q9DB30 406 aa21.25■□□□□ 0.99
Ubb-201ENSMUST00000019649 GsdmaQ9EST1 446 aa21.25■□□□□ 0.99
Ubb-201ENSMUST00000019649 Tjp1P39447 1745 aaKnown RBP21.24■□□□□ 0.99
Ubb-201ENSMUST00000019649 Rab11fip3Q8CHD8 1047 aa21.24■□□□□ 0.99
Ubb-201ENSMUST00000019649 Trpm3Q5F4S9 1721 aa21.23■□□□□ 0.99
Ubb-201ENSMUST00000019649 Gm21663A0A0G2JE01 267 aa21.23■□□□□ 0.99
Ubb-201ENSMUST00000019649 Gm7361D3Z6R1 267 aa21.23■□□□□ 0.99
Ubb-201ENSMUST00000019649 5031410I06RikE9Q4E0 267 aa21.23■□□□□ 0.99
Ubb-201ENSMUST00000019649 Gm1979E9QAN3 267 aa21.23■□□□□ 0.99
Ubb-201ENSMUST00000019649 Gm5862K7N5V5 267 aa21.23■□□□□ 0.99
Ubb-201ENSMUST00000019649 Gm10220K7N660 267 aa21.23■□□□□ 0.99
Ubb-201ENSMUST00000019649 Mcm10Q0VBD2 885 aa21.23■□□□□ 0.99
Ubb-201ENSMUST00000019649 Ezh2Q61188 746 aaKnown RBP21.23■□□□□ 0.99
Ubb-201ENSMUST00000019649 Slc5a1Q8C3K6 665 aa21.22■□□□□ 0.99
Ubb-201ENSMUST00000019649 Ssfa2Q922B9 1252 aa21.22■□□□□ 0.99
Ubb-201ENSMUST00000019649 Crb1Q8VHS2 1405 aa21.21■□□□□ 0.99
Ubb-201ENSMUST00000019649 Ccnl1Q52KE7 532 aaKnown RBP21.21■□□□□ 0.99
Ubb-201ENSMUST00000019649 Aox2Q5SGK3 1345 aa21.21■□□□□ 0.99
Ubb-201ENSMUST00000019649 Hmgb2P30681 210 aaKnown RBP21.2■□□□□ 0.98
Ubb-201ENSMUST00000019649 Asic4Q7TNS7 539 aa21.2■□□□□ 0.98
Ubb-201ENSMUST00000019649 Kiaa0319lQ8K135 1048 aa21.2■□□□□ 0.98
Ubb-201ENSMUST00000019649 Pdzd9Q9D9M4 266 aa21.2■□□□□ 0.98
Ubb-201ENSMUST00000019649 Kiaa1107Q80TK0 1369 aa21.2■□□□□ 0.98
Ubb-201ENSMUST00000019649 Stk31Q99MW1 1018 aa21.2■□□□□ 0.98
Ubb-201ENSMUST00000019649 U2af1Q9D883 239 aaKnown RBP21.2■□□□□ 0.98
Ubb-201ENSMUST00000019649 Klc3Q91W40 508 aa21.19■□□□□ 0.98
Ubb-201ENSMUST00000019649 Ankrd13dQ6PD24 605 aa21.18■□□□□ 0.98
Ubb-201ENSMUST00000019649 Q8BT18 775 aa21.18■□□□□ 0.98
Ubb-201ENSMUST00000019649 Chmp7Q8R1T1 451 aa21.18■□□□□ 0.98
Ubb-201ENSMUST00000019649 Ciz1Q8VEH2 845 aa21.18■□□□□ 0.98
Ubb-201ENSMUST00000019649 Ubr2Q6WKZ8 1755 aa21.17■□□□□ 0.98
Ubb-201ENSMUST00000019649 Fchsd2Q3USJ8 740 aa21.15■□□□□ 0.98
Ubb-201ENSMUST00000019649 Q7TT23 1179 aa21.15■□□□□ 0.98
Ubb-201ENSMUST00000019649 Rpgrip1lQ8CG73 1264 aa21.15■□□□□ 0.98
Ubb-201ENSMUST00000019649 Ints5Q8CHT3 1018 aa21.13■□□□□ 0.97
Ubb-201ENSMUST00000019649 Hdac6Q9Z2V5 1149 aa21.13■□□□□ 0.97
Ubb-201ENSMUST00000019649 Atf7ipQ7TT18 1306 aa21.12■□□□□ 0.97
Ubb-201ENSMUST00000019649 TmpoQ61033 693 aaKnown RBP21.12■□□□□ 0.97
Ubb-201ENSMUST00000019649 Nop58Q6DFW4 536 aaKnown RBP21.11■□□□□ 0.97
Ubb-201ENSMUST00000019649 Iqcf3Q9D498 203 aa21.11■□□□□ 0.97
Ubb-201ENSMUST00000019649 Cabp2Q9JLK4 216 aa21.09■□□□□ 0.97
Ubb-201ENSMUST00000019649 Akt1s1Q9D1F4 257 aa21.08■□□□□ 0.97
Ubb-201ENSMUST00000019649 Myo5bP21271 1818 aa21.08■□□□□ 0.96
Ubb-201ENSMUST00000019649 Q4VA45 678 aa21.07■□□□□ 0.96
Ubb-201ENSMUST00000019649 Tcerg1Q8CGF7 1100 aaKnown RBP21.07■□□□□ 0.96
Ubb-201ENSMUST00000019649 Abcc12Q80WJ6 1366 aa21.07■□□□□ 0.96
Ubb-201ENSMUST00000019649 Kif23E9Q5G3 953 aa21.07■□□□□ 0.96
Ubb-201ENSMUST00000019649 Fam198bQ3UPI1 517 aa21.07■□□□□ 0.96
Ubb-201ENSMUST00000019649 Wwc2Q6NXJ0 1187 aa21.07■□□□□ 0.96
Ubb-201ENSMUST00000019649 Ccdc85cE9Q6B2 420 aa21.06■□□□□ 0.96
Ubb-201ENSMUST00000019649 Exoc6Q8R313 802 aa21.06■□□□□ 0.96
Ubb-201ENSMUST00000019649 Atg3Q9CPX6 314 aa21.06■□□□□ 0.96
Ubb-201ENSMUST00000019649 Igsf1Q7TQA1 1317 aa21.05■□□□□ 0.96
Ubb-201ENSMUST00000019649 Znf541Q0GGX2 1363 aa21.05■□□□□ 0.96
Ubb-201ENSMUST00000019649 Nkx2-3P97334 362 aa21.05■□□□□ 0.96
Ubb-201ENSMUST00000019649 Jmjd4Q8BFT6 427 aa21.05■□□□□ 0.96
Ubb-201ENSMUST00000019649 Snap23O09044 210 aa21.04■□□□□ 0.96
Ubb-201ENSMUST00000019649 Tiam2Q6ZPF3 1715 aa21.03■□□□□ 0.96
Ubb-201ENSMUST00000019649 CoblQ5NBX1 1337 aaKnown RBP21.03■□□□□ 0.96
Ubb-201ENSMUST00000019649 Mapk8ip3Q9ESN9 1337 aa21.03■□□□□ 0.96
Ubb-201ENSMUST00000019649 Bicdl1A0JNT9 577 aa21.02■□□□□ 0.96
Ubb-201ENSMUST00000019649 Ric1Q69ZJ7 1422 aa21.02■□□□□ 0.96
Ubb-201ENSMUST00000019649 Kndc1Q0KK55 1742 aa21.01■□□□□ 0.95
Ubb-201ENSMUST00000019649 Ccdc155Q80VJ8 648 aa21.01■□□□□ 0.95
Ubb-201ENSMUST00000019649 Gpr150Q8BL07 427 aa21.01■□□□□ 0.95
Ubb-201ENSMUST00000019649 Dcaf5Q80T85 946 aa21.01■□□□□ 0.95
Ubb-201ENSMUST00000019649 Sos1Q62245 1319 aa21■□□□□ 0.95
Ubb-201ENSMUST00000019649 Rtf1A2AQ19 715 aaKnown RBP21■□□□□ 0.95
Ubb-201ENSMUST00000019649 Apaf1O88879 1249 aa21■□□□□ 0.95
Ubb-201ENSMUST00000019649 PsdQ5DTT2 1024 aa20.99■□□□□ 0.95
Ubb-201ENSMUST00000019649 Cap2Q9CYT6 476 aa20.99■□□□□ 0.95
Ubb-201ENSMUST00000019649 AceP09470 1312 aa20.99■□□□□ 0.95
Ubb-201ENSMUST00000019649 Msh6P54276 1358 aaKnown RBP20.98■□□□□ 0.95
Ubb-201ENSMUST00000019649 AtrnQ9WU60 1428 aa20.98■□□□□ 0.95
Ubb-201ENSMUST00000019649 MeiocA2AG06 965 aa20.98■□□□□ 0.95
Ubb-201ENSMUST00000019649 Trpc5Q9QX29 975 aa20.97■□□□□ 0.95
Ubb-201ENSMUST00000019649 C4bP01029 1738 aa20.96■□□□□ 0.95
Ubb-201ENSMUST00000019649 Map4k4P97820 1233 aaKnown RBP20.95■□□□□ 0.94
Ubb-201ENSMUST00000019649 Zscan21Q07231 555 aa20.95■□□□□ 0.94
Ubb-201ENSMUST00000019649 Smg7Q5RJH6 1138 aaKnown RBP20.95■□□□□ 0.94
Ubb-201ENSMUST00000019649 Nav1Q8CH77 1875 aa20.95■□□□□ 0.94
Ubb-201ENSMUST00000019649 En2P09066 324 aa20.94■□□□□ 0.94
Ubb-201ENSMUST00000019649 Usp19Q3UJD6 1360 aa20.94■□□□□ 0.94
Ubb-201ENSMUST00000019649 Smarcc1P97496 1104 aa20.94■□□□□ 0.94
Ubb-201ENSMUST00000019649 Golga2Q921M4 999 aa20.94■□□□□ 0.94
Ubb-201ENSMUST00000019649 Efcab2Q9CQ46 164 aa20.94■□□□□ 0.94
Ubb-201ENSMUST00000019649 Gm13023A2A8N2 498 aa20.93■□□□□ 0.94
Ubb-201ENSMUST00000019649 Cavin4A2AMM0 362 aa20.93■□□□□ 0.94
Ubb-201ENSMUST00000019649 NppbP40753 121 aa20.93■□□□□ 0.94
Ubb-201ENSMUST00000019649 Ubr3Q5U430 1889 aa20.93■□□□□ 0.94
Ubb-201ENSMUST00000019649 Adcy9P51830 1353 aa20.92■□□□□ 0.94
Ubb-201ENSMUST00000019649 Jdp2P97875 163 aa20.92■□□□□ 0.94
Ubb-201ENSMUST00000019649 Spata31d1bE9QA57 1361 aa20.91■□□□□ 0.94
Ubb-201ENSMUST00000019649 Magea1O89006 320 aa20.91■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms