RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 ACAP2Q15057 778 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 TMEM63BQ5T3F8 832 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 C16orf62Q7Z3J2 963 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 LUZP2Q86TE4 346 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 SPPL2CQ8IUH8 684 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 FAM47BQ8NA70 645 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 PNPT1Q8TCS8 783 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 BRSK1Q8TDC3 778 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 AP2M1Q96CW1 435 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 FUBP3Q96I24 572 aaKnown RBP eCLIP12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 FERD3LQ96RJ6 166 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 NUAK2Q9H093 628 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 SOHLH2Q9NX45 425 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 DUOX1Q9NRD9 1551 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 NR1H2P55055 460 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 DGUOKQ16854 277 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 ATXN7L2Q5T6C5 722 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 ZNF618Q5T7W0 954 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 CAMKK1Q8N5S9 505 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 ZNF540Q8NDQ6 660 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 OR10G6Q8NH81 332 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 PPCDCQ96CD2 204 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 REXO4Q9GZR2 422 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 SGK2Q9HBY8 427 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 TIMMDC1Q9NPL8 285 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 DNAJC11Q9NVH1 559 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 ADGRE2Q9UHX3 823 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 IKZF3Q9UKT9 509 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 KNDC1Q76NI1 1749 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 A0A1B0GW55 424 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 TAF4O00268 1085 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 SLC7A4O43246 635 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 DUX4L2P0CJ85 424 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 DUX4L3P0CJ86 424 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 DUX4L4P0CJ87 422 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 DUX4L5P0CJ88 424 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 DUX4L6P0CJ89 424 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 DUX4L7P0CJ90 424 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 PSMA3P25788 255 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 KIR3DL1P43629 444 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 TRIM25Q14258 630 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 GLYATQ6IB77 296 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 CAPN13Q6MZZ7 669 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 TRIM40Q6P9F5 258 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 CHST9Q7L1S5 443 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 C17orf64Q86WR6 236 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 ZBTB2Q8N680 514 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 OSBPL11Q9BXB4 747 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 MIR1-1HGQ9H1L0 117 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 S100A14Q9HCY8 104 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 GKN1Q9NS71 199 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 DUX4Q9UBX2 424 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 RAB23Q9ULC3 237 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 VPS4AQ9UN37 437 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 MAP1BP46821 2468 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 GSAPA4D1B5 854 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 TRIM64CA6NLI5 447 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 TRBC1P01850 177 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 F7P08709 466 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 SLC6A2P23975 617 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 TTKP33981 857 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 COPZ1P61923 177 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 FCHO2Q0JRZ9 810 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 PLA2G4EQ3MJ16 856 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 PDZK1Q5T2W1 519 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 BROXQ5VW32 411 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 FAAH2Q6GMR7 532 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 SERPINA9Q86WD7 417 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 NPLOC4Q8TAT6 608 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 ING5Q8WYH8 240 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 PTPRJQ12913 1337 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 SLC38A8A6NNN8 435 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 ENPP3O14638 875 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 ASNA1O43681 348 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 OR10H3O60404 316 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 OR4F21O95013 312 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 SLC1A2P43004 574 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 SSR2P43308 183 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 BHLHB9Q6PI77 547 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 R3HCC1LQ7Z5L2 792 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 CTU1Q7Z7A3 348 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 FAM20CQ8IXL6 584 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 ZNF655Q8N720 491 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 SLAIN1Q8ND83 568 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 OR7A2PQ8NGA2 310 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 NTAN1Q96AB6 310 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 EIF2B3Q9NR50 452 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 DNAJC28Q9NX36 388 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 CNTN6Q9UQ52 1028 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 OR51F1A6NGY5 319 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 BBIP1A8MTZ0 92 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 COQ9O75208 318 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 EPHX1P07099 455 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 ENO2P09104 434 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 CYP4B1P13584 511 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 POLR2JP52435 117 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 CPTPQ5TA50 214 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 NCBP2-AS2Q69YL0 99 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 PARGQ86W56 976 aa12.42□□□□□ -0.42
TNFAIP3-206ENST00000612899 CYP2S1Q96SQ9 504 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms